RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 PSPC1Q8WXF1 523 aaKnown RBP5.7□□□□□ -1.5
SSR3-208ENST00000496050 SIN3AQ96ST3 1273 aa5.7□□□□□ -1.5
SSR3-208ENST00000496050 NCAPGQ9BPX3 1015 aa5.7□□□□□ -1.5
SSR3-208ENST00000496050 QTRT1Q9BXR0 403 aaKnown RBP5.7□□□□□ -1.5
SSR3-208ENST00000496050 GLIS2Q9BZE0 524 aaPredicted RBP5.7□□□□□ -1.5
SSR3-208ENST00000496050 CDT1Q9H211 546 aa5.7□□□□□ -1.5
SSR3-208ENST00000496050 SH2D4AQ9H788 454 aa5.7□□□□□ -1.5
SSR3-208ENST00000496050 WDR6Q9NNW5 1121 aaKnown RBP5.7□□□□□ -1.5
SSR3-208ENST00000496050 CTNNAL1Q9UBT7 734 aa5.7□□□□□ -1.5
SSR3-208ENST00000496050 ADD3Q9UEY8 706 aaKnown RBP5.7□□□□□ -1.5
SSR3-208ENST00000496050 MKLN1Q9UL63 735 aa5.7□□□□□ -1.5
SSR3-208ENST00000496050 SETD1BQ9UPS6 1966 aaKnown RBP5.69□□□□□ -1.5
SSR3-208ENST00000496050 hCG_1807616A0A1W2PRN6 198 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 TMCC2O75069 709 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 BCAR3O75815 825 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 MTA2O94776 668 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 IPO7O95373 1038 aaKnown RBP5.69□□□□□ -1.5
SSR3-208ENST00000496050 SLPIP03973 132 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 CTPS1P17812 591 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 TM4SF1P30408 202 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 CDAP32320 146 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 TNFSF8P32971 234 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 PSMB10P40306 273 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 RAD52P43351 418 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 PIP4K2AP48426 406 aaPredicted RBP5.69□□□□□ -1.5
SSR3-208ENST00000496050 EFNA5P52803 228 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 CLDN2P57739 230 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 GAD2Q05329 585 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 CSTF3Q12996 717 aaKnown RBP5.69□□□□□ -1.5
SSR3-208ENST00000496050 AIMP2Q13155 320 aaKnown RBP5.69□□□□□ -1.5
SSR3-208ENST00000496050 ACVR2BQ13705 512 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 SMTNL2Q2TAL5 461 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 MFSD4BQ5TF39 518 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 SLC18B1Q6NT16 456 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 CES5AQ6NT32 575 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 TAGAPQ8N103 731 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 WDTC1Q8N5D0 677 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 LRRC57Q8N9N7 239 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 FAM120BQ96EK7 910 aaKnown RBP5.69□□□□□ -1.5
SSR3-208ENST00000496050 CALML4Q96GE6 196 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 NUF2Q9BZD4 464 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 B3GNT4Q9C0J1 378 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 PLEKHA4Q9H4M7 779 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 TASP1Q9H6P5 420 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 TMEM184CQ9NVA4 438 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 MTMR6Q9Y217 621 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 TMEM5Q9Y2B1 443 aa5.69□□□□□ -1.5
SSR3-208ENST00000496050 AAR2Q9Y312 384 aaKnown RBP5.69□□□□□ -1.5
SSR3-208ENST00000496050 KLRF2D3W0D1 207 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 TLR2O60603 784 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 CSH1P0DML2 217 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 CSH2P0DML3 217 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 PORP16435 677 aaPredicted RBP5.68□□□□□ -1.5
SSR3-208ENST00000496050 ACTN2P35609 894 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 HADHAP40939 763 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 ARHGAP25P42331 645 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 ITGADQ13349 1161 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 DUSP28Q4G0W2 176 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 PAPD7Q5XG87 772 aaKnown RBP5.68□□□□□ -1.5
SSR3-208ENST00000496050 HEPHL1Q6MZM0 1159 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 ANKRD13BQ86YJ7 626 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 TICAM1Q8IUC6 712 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 DHX40Q8IX18 779 aaKnown RBP5.68□□□□□ -1.5
SSR3-208ENST00000496050 HORMAD2Q8N7B1 307 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 EME1Q96AY2 570 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 OTULINQ96BN8 352 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 ERP27Q96DN0 273 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 ZC3HAV1LQ96H79 300 aaKnown RBP5.68□□□□□ -1.5
SSR3-208ENST00000496050 ZFYVE19Q96K21 471 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 YME1L1Q96TA2 773 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 POLR1BQ9H9Y6 1135 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 KIF9Q9HAQ2 790 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 SCPEP1Q9HB40 452 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 SMYD2Q9NRG4 433 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 SLC6A13Q9NSD5 602 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 RRP7BPQ9NSQ0 103 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 NKIRAS2Q9NYR9 191 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 NDRG3Q9UGV2 375 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 ADAM18Q9Y3Q7 739 aa5.68□□□□□ -1.5
SSR3-208ENST00000496050 LSM4Q9Y4Z0 139 aaKnown RBP5.68□□□□□ -1.5
SSR3-208ENST00000496050 FAM237AA0A1B0GTK4 181 aa5.67□□□□□ -1.5
SSR3-208ENST00000496050 FRMD3A2A2Y4 597 aa5.67□□□□□ -1.5
SSR3-208ENST00000496050 B4DLN1 442 aa5.67□□□□□ -1.5
SSR3-208ENST00000496050 STMND1H3BQB6 276 aa5.67□□□□□ -1.5
SSR3-208ENST00000496050 SNAP23O00161 211 aa5.67□□□□□ -1.5
SSR3-208ENST00000496050 TLX3O43711 291 aaPredicted RBP5.67□□□□□ -1.5
SSR3-208ENST00000496050 AHCYL1O43865 530 aa5.67□□□□□ -1.5
SSR3-208ENST00000496050 KRT10P13645 584 aa5.67□□□□□ -1.5
SSR3-208ENST00000496050 SRD5A1P18405 259 aa5.67□□□□□ -1.5
SSR3-208ENST00000496050 EPHB2P29323 1055 aa5.67□□□□□ -1.5
SSR3-208ENST00000496050 CLCN5P51795 746 aa5.67□□□□□ -1.5
SSR3-208ENST00000496050 HDAC4P56524 1084 aa5.67□□□□□ -1.5
SSR3-208ENST00000496050 NLRP5P59047 1200 aa5.67□□□□□ -1.5
SSR3-208ENST00000496050 EPS8Q12929 822 aa5.67□□□□□ -1.5
SSR3-208ENST00000496050 FGFBP1Q14512 234 aa5.67□□□□□ -1.5
SSR3-208ENST00000496050 DRAP1Q14919 205 aaPredicted RBP5.67□□□□□ -1.5
SSR3-208ENST00000496050 PLEKHS1Q5SXH7 462 aa5.67□□□□□ -1.5
SSR3-208ENST00000496050 YTHDF3Q7Z739 585 aaKnown RBP5.67□□□□□ -1.5
SSR3-208ENST00000496050 TDRPQ86YL5 185 aa5.67□□□□□ -1.5
SSR3-208ENST00000496050 ADGRF2Q8IZF7 708 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms