RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 CYP2A13Q16696 494 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 KYAT1Q16773 422 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 TRIM16LQ309B1 348 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 USP43Q70EL4 1123 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 STRA8Q7Z7C7 330 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 NATD1Q8N6N6 113 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 GDPD5Q8WTR4 605 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 SARS2Q9NP81 518 aaKnown RBP12.47□□□□□ -0.41
USP11-206ENST00000469080 NT5MQ9NPB1 228 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 LOC105371267A0A1B0GV96 52 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 SEC24DO94855 1032 aaPredicted RBP12.47□□□□□ -0.41
USP11-206ENST00000469080 SMIM18P0DKX4 95 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 SLC12A2P55011 1212 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 NR1H3Q13133 447 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 UBXN11Q5T124 520 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 C4orf22Q6V702 233 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 ALYREFQ86V81 257 aaKnown RBP12.47□□□□□ -0.41
USP11-206ENST00000469080 PDSS2Q86YH6 399 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 LRRC52Q8N7C0 313 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 DTX3Q8N9I9 347 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 ATP2A3Q93084 1043 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 MTBPQ96DY7 904 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 PRR11Q96HE9 360 aaPredicted RBP12.47□□□□□ -0.41
USP11-206ENST00000469080 ZNF778Q96MU6 729 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 KATNBL1Q9H079 304 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 ZNF304Q9HCX3 659 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 FKBP14Q9NWM8 211 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 ATP11BQ9Y2G3 1177 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 TRAFD1O14545 582 aaPredicted RBP12.47□□□□□ -0.41
USP11-206ENST00000469080 LRIG2O94898 1065 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 NOS2P35228 1153 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 ACADSBP45954 432 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 CTXN3Q4LDR2 81 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 TAF2Q6P1X5 1199 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 ATPAF2Q8N5M1 289 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 ZNF512Q96ME7 567 aaPredicted RBP12.47□□□□□ -0.41
USP11-206ENST00000469080 RPRD1AQ96P16 312 aaPredicted RBP12.47□□□□□ -0.41
USP11-206ENST00000469080 TLE6Q9H808 572 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 CHST12Q9NRB3 414 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 MORF4L1Q9UBU8 362 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 STARD13Q9Y3M8 1113 aa12.47□□□□□ -0.41
USP11-206ENST00000469080 J3QRK9 145 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 PEX14O75381 377 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 VAPBO95292 243 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 PRKCGP05129 697 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 ODC1P11926 461 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 PEX2P28328 305 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 ADRA1BP35368 520 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 PGFP49763 221 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 VWA5B1Q5TIE3 1220 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 TMC5Q6UXY8 1006 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 CYP4V2Q6ZWL3 525 aaPredicted RBP12.46□□□□□ -0.41
USP11-206ENST00000469080 TAC4Q86UU9 113 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 LRRTM3Q86VH5 581 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 SLC26A11Q86WA9 606 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 ERI1Q8IV48 349 aaKnown RBP12.46□□□□□ -0.41
USP11-206ENST00000469080 REM2Q8IYK8 340 aaPredicted RBP12.46□□□□□ -0.41
USP11-206ENST00000469080 ZNF567Q8N184 647 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 SNX31Q8N9S9 440 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 FBXL8Q96CD0 374 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 ZFRQ96KR1 1074 aaKnown RBP12.46□□□□□ -0.41
USP11-206ENST00000469080 MARK4Q96L34 752 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 RBM22Q9NW64 420 aaKnown RBP eCLIP12.46□□□□□ -0.41
USP11-206ENST00000469080 TCRBV5S1A1TA0A578 114 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 HNRNPCL1O60812 293 aaKnown RBP12.46□□□□□ -0.41
USP11-206ENST00000469080 CRYZL1O95825 349 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 CPA3P15088 417 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 GLULP15104 373 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 AQP5P55064 265 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 ITGADQ13349 1161 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 PDK1Q15118 436 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 PSMD5Q16401 504 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 N4BP2L1Q5TBK1 243 aaPredicted RBP12.46□□□□□ -0.41
USP11-206ENST00000469080 NCBP2-AS2Q69YL0 99 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 PDZD4Q76G19 769 aaPredicted RBP12.46□□□□□ -0.41
USP11-206ENST00000469080 PLEKHA8Q96JA3 519 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 CCDC138Q96M89 665 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 FICDQ9BVA6 458 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 SLC4A5Q9BY07 1137 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 CYLDQ9NQC7 956 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 SAR1AQ9NR31 198 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 SLC38A7Q9NVC3 462 aa12.46□□□□□ -0.41
USP11-206ENST00000469080 A0A0U1RQS6 177 aa12.46□□□□□ -0.42
USP11-206ENST00000469080 TPP1O14773 563 aa12.46□□□□□ -0.42
USP11-206ENST00000469080 AQP9O43315 295 aa12.46□□□□□ -0.42
USP11-206ENST00000469080 ICMTO60725 284 aa12.46□□□□□ -0.42
USP11-206ENST00000469080 ADSLP30566 484 aaPredicted RBP12.46□□□□□ -0.42
USP11-206ENST00000469080 INCA1Q0VD86 236 aa12.46□□□□□ -0.42
USP11-206ENST00000469080 STK11Q15831 433 aa12.46□□□□□ -0.42
USP11-206ENST00000469080 FASTKD1Q53R41 847 aaKnown RBP12.46□□□□□ -0.42
USP11-206ENST00000469080 HABP4Q5JVS0 413 aaKnown RBP12.46□□□□□ -0.42
USP11-206ENST00000469080 PTAR1Q7Z6K3 402 aaPredicted RBP12.46□□□□□ -0.42
USP11-206ENST00000469080 RNF148Q8N7C7 305 aa12.46□□□□□ -0.42
USP11-206ENST00000469080 FERD3LQ96RJ6 166 aa12.46□□□□□ -0.42
USP11-206ENST00000469080 COLEC11Q9BWP8 271 aa12.46□□□□□ -0.42
USP11-206ENST00000469080 ACSS3Q9H6R3 686 aa12.46□□□□□ -0.42
USP11-206ENST00000469080 SLC12A8A0AV02 714 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 ZNF12P17014 697 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 CDH2P19022 906 aaPredicted RBP12.45□□□□□ -0.42
USP11-206ENST00000469080 MSX2P35548 267 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms