RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 YWHAHQ04917 246 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 SSRP1Q08945 709 aaKnown RBP4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 STRN3Q13033 797 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 CHIT1Q13231 466 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 DRP2Q13474 957 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 VEPH1Q14D04 833 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 ZMYND11Q15326 602 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 SF1Q15637 639 aaKnown RBP4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 TSC22D1Q15714 1073 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 KLHL40Q2TBA0 621 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 FAM98BQ52LJ0 330 aaKnown RBP4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 EMC4Q5J8M3 183 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 FAM209BQ5JX69 171 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 TMEM240Q5SV17 173 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 PHF19Q5T6S3 580 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 STEAP3Q658P3 488 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 TRMT10BQ6PF06 316 aaKnown RBP4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 FOXR2Q6PJQ5 311 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 KLHL24Q6TFL4 600 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 TMC5Q6UXY8 1006 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 ZNF852Q6ZMS4 543 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 RFX8Q6ZV50 586 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 TMTC3Q6ZXV5 915 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 SPATC1Q76KD6 591 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 SLFN11Q7Z7L1 901 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 NEK8Q86SG6 692 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 PRPF39Q86UA1 669 aaKnown RBP4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 UNC5CLQ8IV45 518 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 MAP7D3Q8IWC1 876 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 PHC2Q8IXK0 858 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 CCDC36Q8IYA8 594 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 DIS3L2Q8IYB7 885 aaKnown RBP4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 SLC38A6Q8IZM9 456 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 BBS5Q8N3I7 341 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 CSGALNACT2Q8N6G5 542 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 ARFGAP2Q8N6H7 521 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 ZNF527Q8NB42 609 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 EXD1Q8NHP7 514 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 ADAMTS16Q8TE57 1224 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 ZNF384Q8TF68 577 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 CCDC127Q96BQ5 260 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 RMND5BQ96G75 393 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 LRGUKQ96M69 825 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 GNRHR2Q96P88 292 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 TMEM209Q96SK2 561 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 NUP88Q99567 741 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 CDC6Q99741 560 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 DHRS4Q9BTZ2 278 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 FRMD8P1Q9BZ68 369 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 OSBPL6Q9BZF3 934 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 HSD3B7Q9H2F3 369 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 CDIP1Q9H305 208 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 OR51B5Q9H339 312 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 WDR26Q9H7D7 661 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 TRPC7Q9HCX4 862 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 MID1IP1Q9NPA3 183 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 SNTG1Q9NSN8 517 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 SLC35D1Q9NTN3 355 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 NINJ2Q9NZG7 142 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 VPS54Q9P1Q0 977 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 RCOR3Q9P2K3 495 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 STX18Q9P2W9 335 aaKnown RBP4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 CACNG4Q9UBN1 327 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 FTSJ1Q9UET6 329 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 IPO11Q9UI26 975 aaKnown RBP4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 DNAI1Q9UI46 699 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 MAD2L2Q9UI95 211 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 VPS51Q9UID3 782 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 PCDHA7Q9UN72 937 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 ARHGAP26Q9UNA1 814 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 AGAP1Q9UPQ3 857 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 MTMR6Q9Y217 621 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 NAALAD2Q9Y3Q0 740 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 PCDHGA9Q9Y5G4 932 aaKnown RBP4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 HEY1Q9Y5J3 304 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 USP16Q9Y5T5 823 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 CYP46A1Q9Y6A2 500 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 FAM169AQ9Y6X4 670 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 LAMC1P11047 1609 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 RGS12O14924 1447 aa4.81□□□□□ -1.64
HMGB3P9-201ENST00000441799 E9PCH4 1651 aa4.81□□□□□ -1.64
HMGB3P9-201ENST00000441799 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P9-201ENST00000441799 LOC100506127A0A0U1RQW1 187 aa4.81□□□□□ -1.64
HMGB3P9-201ENST00000441799 PI4KAP2A4QPH2 592 aa4.81□□□□□ -1.64
HMGB3P9-201ENST00000441799 VWA3AA6NCI4 1184 aa4.81□□□□□ -1.64
HMGB3P9-201ENST00000441799 TMEM210A6NLX4 147 aa4.81□□□□□ -1.64
HMGB3P9-201ENST00000441799 FOXO6A8MYZ6 492 aa4.81□□□□□ -1.64
HMGB3P9-201ENST00000441799 NPIPB8E9PQR5 432 aa4.81□□□□□ -1.64
HMGB3P9-201ENST00000441799 O00370 1275 aa4.81□□□□□ -1.64
HMGB3P9-201ENST00000441799 CXCL11O14625 94 aa4.81□□□□□ -1.64
HMGB3P9-201ENST00000441799 SLC9A3R1O14745 358 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P9-201ENST00000441799 TPP1O14773 563 aa4.81□□□□□ -1.64
HMGB3P9-201ENST00000441799 KCNN4O15554 427 aa4.81□□□□□ -1.64
HMGB3P9-201ENST00000441799 HCRTR2O43614 444 aa4.81□□□□□ -1.64
HMGB3P9-201ENST00000441799 FOXS1O43638 330 aa4.81□□□□□ -1.64
HMGB3P9-201ENST00000441799 SSX5O60225 188 aa4.81□□□□□ -1.64
HMGB3P9-201ENST00000441799 MED24O75448 989 aa4.81□□□□□ -1.64
HMGB3P9-201ENST00000441799 CYP7B1O75881 506 aa4.81□□□□□ -1.64
HMGB3P9-201ENST00000441799 IPO13O94829 963 aaKnown RBP4.81□□□□□ -1.64
HMGB3P9-201ENST00000441799 CAMTA2O94983 1202 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms