RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 IRF5Q13568 498 aa13.22□□□□□ -0.29
PTPRN2-202ENST00000389416 CBX2Q14781 532 aaPredicted RBP13.22□□□□□ -0.29
PTPRN2-202ENST00000389416 TMCO2Q7Z6W1 182 aaPredicted RBP13.22□□□□□ -0.29
PTPRN2-202ENST00000389416 SRLQ86TD4 932 aa13.22□□□□□ -0.29
PTPRN2-202ENST00000389416 PARP9Q8IXQ6 854 aa13.22□□□□□ -0.29
PTPRN2-202ENST00000389416 TNS4Q8IZW8 715 aa13.22□□□□□ -0.29
PTPRN2-202ENST00000389416 TRIM45Q9H8W5 580 aaPredicted RBP13.22□□□□□ -0.29
PTPRN2-202ENST00000389416 NDST3O95803 873 aa13.22□□□□□ -0.29
PTPRN2-202ENST00000389416 SLC2A4P14672 509 aa13.22□□□□□ -0.29
PTPRN2-202ENST00000389416 CES1P23141 567 aa13.22□□□□□ -0.29
PTPRN2-202ENST00000389416 DGKAP23743 735 aa13.22□□□□□ -0.29
PTPRN2-202ENST00000389416 PTPN3P26045 913 aa13.22□□□□□ -0.29
PTPRN2-202ENST00000389416 HNRNPDQ14103 355 aaKnown RBP13.22□□□□□ -0.29
PTPRN2-202ENST00000389416 EML3Q32P44 896 aa13.22□□□□□ -0.29
PTPRN2-202ENST00000389416 FNBP1LQ5T0N5 605 aa13.22□□□□□ -0.29
PTPRN2-202ENST00000389416 LRRC8BQ6P9F7 803 aa13.22□□□□□ -0.29
PTPRN2-202ENST00000389416 EXOC3L1Q86VI1 746 aa13.22□□□□□ -0.29
PTPRN2-202ENST00000389416 IFNLR1Q8IU57 520 aaPredicted RBP13.22□□□□□ -0.29
PTPRN2-202ENST00000389416 KCTD13Q8WZ19 329 aa13.22□□□□□ -0.29
PTPRN2-202ENST00000389416 JADE3Q92613 823 aa13.22□□□□□ -0.29
PTPRN2-202ENST00000389416 IGSF21Q96ID5 467 aa13.22□□□□□ -0.29
PTPRN2-202ENST00000389416 COPS8Q99627 209 aa13.22□□□□□ -0.29
PTPRN2-202ENST00000389416 SEMA4BQ9NPR2 832 aaPredicted RBP13.22□□□□□ -0.29
PTPRN2-202ENST00000389416 ANKRD6Q9Y2G4 727 aa13.22□□□□□ -0.29
PTPRN2-202ENST00000389416 CLUHO75153 1309 aa13.22□□□□□ -0.29
PTPRN2-202ENST00000389416 C5orf60A6NFR6 353 aa13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 MGAT4DA6NG13 374 aa13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 UBDO15205 165 aa13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 CD3EAPO15446 510 aaKnown RBP13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 TPST1O60507 370 aa13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 BAIAP3O94812 1187 aa13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 SLC25A14O95258 325 aaPredicted RBP13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 MAPK9P45984 424 aa13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 FBXL22Q6P050 247 aa13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 PACS1Q6VY07 963 aa13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 RNF19BQ6ZMZ0 732 aa13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 MILR1Q7Z6M3 343 aa13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 LDB1Q86U70 411 aaPredicted RBP13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 SLC44A2Q8IWA5 706 aaPredicted RBP13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 NIPA2Q8N8Q9 360 aa13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 STAG3L4Q8TBR4 150 aa13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 CATSPER2Q96P56 530 aa13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 FAM126AQ9BYI3 521 aaPredicted RBP13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 ZFYVE1Q9HBF4 777 aa13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 KLC4Q9NSK0 619 aa13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 PGAP2Q9UHJ9 254 aa13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 TLR6Q9Y2C9 796 aa13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 AKAP10O43572 662 aa13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 TSPAN8P19075 237 aa13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 CDK7P50613 346 aa13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 FAM46CQ5VWP2 391 aa13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 FBXW10Q5XX13 1052 aa13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 GRAMD4Q6IC98 578 aa13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 CXorf38Q8TB03 319 aa13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 TBATAQ96M53 351 aa13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 MRPL46Q9H2W6 279 aaKnown RBP13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 COPS7BQ9H9Q2 264 aaPredicted RBP13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 ASB3Q9Y575 518 aa13.21□□□□□ -0.29
PTPRN2-202ENST00000389416 MBLAC1A4D2B0 266 aaPredicted RBP13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 TTC36A6NLP5 189 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 NR5A2O00482 541 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 PTGESO14684 152 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 UBOX5O94941 541 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 AP2A1O95782 977 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 THRAP10827 490 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 HTR7P34969 479 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 INPP5AQ14642 412 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 CNSTQ6PJW8 725 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 SLC39A5Q6ZMH5 540 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 IQCKQ8N0W5 287 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 TAGAPQ8N103 731 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 PLD4Q96BZ4 506 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 PIWIL1Q96J94 861 aaKnown RBP13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 CYP2S1Q96SQ9 504 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 SGIP1Q9BQI5 828 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 HGH1Q9BTY7 390 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 SLC25A51Q9H1U9 297 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 GBA3Q9H227 469 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 EFCAB1Q9HAE3 211 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 PARVBQ9HBI1 364 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 ANLNQ9NQW6 1124 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 GIMAP4Q9NUV9 329 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 H3BMM5 538 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 TPSB2P20231 275 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 MAPKAPK2P49137 400 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 TPSAB1Q15661 275 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 FAM45BPQ6NSW5 357 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 FAM45AQ8TCE6 357 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 POF1BQ8WVV4 589 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 NTAN1Q96AB6 310 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 HAPLN3Q96S86 360 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 OPTCQ9UBM4 332 aa13.21□□□□□ -0.3
PTPRN2-202ENST00000389416 TBC1D3DA0A087WVF3 549 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 TBC1D3IA0A087WXS9 549 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 TBC1D3EA0A087X179 549 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 TBC1D3KA0A087X1G2 549 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 TBC1D3FA6NER0 549 aaPredicted RBP13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 TBC1D3LB9A6J9 549 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 SOCS7O14512 581 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 FAM155BO75949 473 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms