RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 MOCS1Q9NZB8 636 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 IL37Q9NZH6 218 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 RNF103-CHMP3A0A140T963 221 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 K7ENM7 598 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 EI24O14681 340 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 UPK1BO75841 260 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 TSPAN9O75954 239 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 HSPA4LO95757 839 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 ASNSP08243 561 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 GSTM1P09488 218 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 ATP6V1B2P21281 511 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 EEF1B2P24534 225 aaKnown RBP9.64□□□□□ -0.87
SF3A3-201ENST00000373019 HIBADHP31937 336 aaKnown RBP9.64□□□□□ -0.87
SF3A3-201ENST00000373019 CCR10P46092 362 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 ADPRMQ3LIE5 342 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 CMTR2Q8IYT2 770 aaKnown RBP9.64□□□□□ -0.87
SF3A3-201ENST00000373019 SLC22A15Q8IZD6 547 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 OR2T34Q8NGX1 318 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 PSMA8Q8TAA3 256 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.64□□□□□ -0.87
SF3A3-201ENST00000373019 PBXIP1Q96AQ6 731 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 SIGLEC10Q96LC7 697 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 RRAGCQ9HB90 399 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 SYTL2Q9HCH5 934 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 MTMR4Q9NYA4 1195 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 SARDHQ9UL12 918 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 SPDYE2BA6NHP3 402 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.64□□□□□ -0.87
SF3A3-201ENST00000373019 G3V2L1 256 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 MEN1O00255 615 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 ITGBL1O95965 494 aaPredicted RBP9.64□□□□□ -0.87
SF3A3-201ENST00000373019 SPDYE6P0CI01 402 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 HSPA1AP0DMV8 641 aaKnown RBP9.64□□□□□ -0.87
SF3A3-201ENST00000373019 HSPA1BP0DMV9 641 aaKnown RBP9.64□□□□□ -0.87
SF3A3-201ENST00000373019 OSBPP22059 807 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 MPSTP25325 297 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 OR3A3P47888 321 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 HTRA3P83110 453 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 SNRNP35Q16560 246 aaKnown RBP9.64□□□□□ -0.87
SF3A3-201ENST00000373019 SPDYE2Q495Y8 402 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 PXDC1Q5TGL8 231 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 BROXQ5VW32 411 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 DCUN1D2Q6PH85 259 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 ZNF534Q76KX8 674 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 SV2AQ7L0J3 742 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 UBE2Q1Q7Z7E8 422 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 ABRAQ8N0Z2 381 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 SFRP1Q8N474 314 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 FBXL6Q8N531 539 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 DHRSXQ8N5I4 330 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 JPH3Q8WXH2 748 aaPredicted RBP9.64□□□□□ -0.87
SF3A3-201ENST00000373019 FRMD8P1Q9BZ68 369 aaPredicted RBP9.64□□□□□ -0.87
SF3A3-201ENST00000373019 MTMR10Q9NXD2 777 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 STMN3Q9NZ72 180 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 SCN4AP35499 1836 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 CEP350Q5VT06 3117 aa9.64□□□□□ -0.87
SF3A3-201ENST00000373019 E2F8A0AVK6 867 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 RAD51BO15315 384 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 KRT8P05787 483 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 MAGEA3P43357 314 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 ACOT2P49753 483 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 SLC25A11Q02978 314 aaKnown RBP9.63□□□□□ -0.87
SF3A3-201ENST00000373019 C1QBPQ07021 282 aaKnown RBP9.63□□□□□ -0.87
SF3A3-201ENST00000373019 LAMC2Q13753 1193 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 POLD3Q15054 466 aaPredicted RBP9.63□□□□□ -0.87
SF3A3-201ENST00000373019 BRMS1LQ5PSV4 323 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 TMEM236Q5W0B7 351 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 TRAF7Q6Q0C0 670 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 GK5Q6ZS86 529 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 OTOP1Q7RTM1 612 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 MUS81Q96NY9 551 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 CITED4Q96RK1 184 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 VPS33BQ9H267 617 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 ABCB10Q9NRK6 738 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 RAB6BQ9NRW1 208 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 GIMAP4Q9NUV9 329 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 ZNF221Q9UK13 617 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 AGTPBP1Q9UPW5 1226 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 HEATR9A2RTY3 570 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 ISPDA4D126 451 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 SNTNA6NMZ2 147 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 SHOXO15266 292 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 HDAC3O15379 428 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 MTSS1O43312 755 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 GSNP06396 782 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 C7P10643 843 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 HDCP19113 662 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 SEPHS1P49903 392 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 CNTN2Q02246 1040 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 PPP1R3AQ16821 1122 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 AGAP6Q5VW22 663 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 NPNTQ6UXI9 565 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 SPATC1Q76KD6 591 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 PLD6Q8N2A8 252 aaKnown RBP9.63□□□□□ -0.87
SF3A3-201ENST00000373019 CELF2-AS1Q8N7Q2 184 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 LEMD2Q8NC56 503 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 OR5H6Q8NGV6 325 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 LILRB1Q8NHL6 650 aaPredicted RBP9.63□□□□□ -0.87
SF3A3-201ENST00000373019 AGAP4Q96P64 663 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 CHID1Q9BWS9 393 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms