RNA–Protein interactions for RNA: ENST00000339089.10

PHF20-201, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-201ENST00000339089 NEK3P51956 506 aa12.9□□□□□ -0.34
PHF20-201ENST00000339089 WASHC5Q12768 1159 aa12.9□□□□□ -0.34
PHF20-201ENST00000339089 ZNF235Q14590 738 aa12.9□□□□□ -0.34
PHF20-201ENST00000339089 NOMO1Q15155 1222 aa12.9□□□□□ -0.34
PHF20-201ENST00000339089 ODF2Q5BJF6 829 aa12.9□□□□□ -0.34
PHF20-201ENST00000339089 LRRC73Q5JTD7 316 aa12.9□□□□□ -0.34
PHF20-201ENST00000339089 TCEAL6Q6IPX3 200 aa12.9□□□□□ -0.34
PHF20-201ENST00000339089 TIGD7Q6NT04 549 aaPredicted RBP12.9□□□□□ -0.34
PHF20-201ENST00000339089 CYP2U1Q7Z449 544 aa12.9□□□□□ -0.34
PHF20-201ENST00000339089 SYT12Q8IV01 421 aa12.9□□□□□ -0.34
PHF20-201ENST00000339089 SPOCK2Q92563 424 aa12.9□□□□□ -0.34
PHF20-201ENST00000339089 PIGKQ92643 395 aa12.9□□□□□ -0.34
PHF20-201ENST00000339089 FOXJ1Q92949 421 aa12.9□□□□□ -0.34
PHF20-201ENST00000339089 TCEAL3Q969E4 200 aa12.9□□□□□ -0.34
PHF20-201ENST00000339089 TUBGCP5Q96RT8 1024 aa12.9□□□□□ -0.34
PHF20-201ENST00000339089 CEP41Q9BYV8 373 aa12.9□□□□□ -0.34
PHF20-201ENST00000339089 KDM4CQ9H3R0 1056 aa12.9□□□□□ -0.34
PHF20-201ENST00000339089 C10orf88Q9H8K7 445 aa12.9□□□□□ -0.34
PHF20-201ENST00000339089 RXFP3Q9NSD7 469 aa12.9□□□□□ -0.34
PHF20-201ENST00000339089 SEMA4GQ9NTN9 838 aa12.9□□□□□ -0.34
PHF20-201ENST00000339089 RBM22Q9NW64 420 aaKnown RBP eCLIP12.9□□□□□ -0.341e-6■■□□□ 12.9
PHF20-201ENST00000339089 EIF2B4Q9UI10 523 aaKnown RBP12.9□□□□□ -0.34
PHF20-201ENST00000339089 ITM2BQ9Y287 266 aa12.9□□□□□ -0.34
PHF20-201ENST00000339089 CACNA1EQ15878 2313 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 DCHS1Q96JQ0 3298 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 APOC4-APOC2K7ER74 178 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 HTRA2O43464 458 aaPredicted RBP12.89□□□□□ -0.35
PHF20-201ENST00000339089 AP1G1O43747 822 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 NRDCO43847 1150 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 APOC2P02655 101 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 PTMAP06454 111 aaKnown RBP12.89□□□□□ -0.35
PHF20-201ENST00000339089 ZNF806P0C7X5 589 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 CCR5P51681 352 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 AP1S1P61966 158 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 DSC2Q02487 901 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 SFSWAPQ12872 951 aaKnown RBP12.89□□□□□ -0.35
PHF20-201ENST00000339089 TRAF2Q12933 501 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 FGL2Q14314 439 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 SF3A2Q15428 464 aaKnown RBP12.89□□□□□ -0.35
PHF20-201ENST00000339089 TMEM259Q4ZIN3 620 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 UBL4BQ8N7F7 174 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 ACTL9Q8TC94 416 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 ANP32BQ92688 251 aaKnown RBP12.89□□□□□ -0.35
PHF20-201ENST00000339089 ZNF641Q96N77 438 aaPredicted RBP12.89□□□□□ -0.35
PHF20-201ENST00000339089 FAM118BQ9BPY3 351 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 GMEB2Q9UKD1 530 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 R3HDM2Q9Y2K5 976 aaKnown RBP12.89□□□□□ -0.35
PHF20-201ENST00000339089 PCDHGC4Q9Y5F7 938 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 ANKRD36A6QL64 1941 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 PI4KAP42356 2102 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 KNL1Q8NG31 2342 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 TBC1D3DA0A087WVF3 549 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 TBC1D3IA0A087WXS9 549 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 TBC1D3EA0A087X179 549 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 TBC1D3KA0A087X1G2 549 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 TBC1D3FA6NER0 549 aaPredicted RBP12.89□□□□□ -0.35
PHF20-201ENST00000339089 LRRC72A6NJI9 287 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 TBC1D3LB9A6J9 549 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 FZD6O60353 706 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 LRP3O75074 770 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 FSBPO95073 299 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 TBC1D3HP0C7X1 549 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 PTPN3P26045 913 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 OTUD4Q01804 1114 aaKnown RBP12.89□□□□□ -0.35
PHF20-201ENST00000339089 BNC1Q01954 994 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 RAD51Q06609 339 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 AP1B1Q10567 949 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 CSRP2Q16527 193 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 ZNF284Q2VY69 593 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 SEL1L3Q68CR1 1132 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 TBC1D3GQ6DHY5 549 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 TBC1D3CQ6IPX1 549 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 ZC3H18Q86VM9 953 aaKnown RBP12.89□□□□□ -0.35
PHF20-201ENST00000339089 TRIM69Q86WT6 500 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 TBC1D3Q8IZP1 549 aaPredicted RBP12.89□□□□□ -0.35
PHF20-201ENST00000339089 HCAR2Q8TDS4 363 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 P3H4Q92791 437 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 TADA1Q96BN2 335 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 PPP1R16AQ96I34 528 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 QKIQ96PU8 341 aaKnown RBP eCLIP12.89□□□□□ -0.353e-6■■■■□ 21.4
PHF20-201ENST00000339089 SEMA3CQ99985 751 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 BRD8Q9H0E9 1235 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 PREBQ9HCU5 417 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 TRMT1Q9NXH9 659 aaKnown RBP12.89□□□□□ -0.35
PHF20-201ENST00000339089 AMACRQ9UHK6 382 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 SPTBN4Q9H254 2564 aa12.89□□□□□ -0.35
PHF20-201ENST00000339089 PLXNA2O75051 1894 aa12.88□□□□□ -0.35
PHF20-201ENST00000339089 PCDH15Q96QU1 1955 aa12.88□□□□□ -0.35
PHF20-201ENST00000339089 RNGTTO60942 597 aaKnown RBP12.88□□□□□ -0.35
PHF20-201ENST00000339089 PRLP01236 227 aa12.88□□□□□ -0.35
PHF20-201ENST00000339089 PRKCGP05129 697 aa12.88□□□□□ -0.35
PHF20-201ENST00000339089 CD27P26842 260 aa12.88□□□□□ -0.35
PHF20-201ENST00000339089 CD68P34810 354 aaPredicted RBP12.88□□□□□ -0.35
PHF20-201ENST00000339089 CCDC173Q0VFZ6 552 aa12.88□□□□□ -0.35
PHF20-201ENST00000339089 GRM3Q14832 879 aa12.88□□□□□ -0.35
PHF20-201ENST00000339089 PTPRRQ15256 657 aa12.88□□□□□ -0.35
PHF20-201ENST00000339089 FBXL19Q6PCT2 694 aa12.88□□□□□ -0.35
PHF20-201ENST00000339089 TRIM58Q8NG06 486 aa12.88□□□□□ -0.35
PHF20-201ENST00000339089 UBE2Q2Q8WVN8 375 aa12.88□□□□□ -0.35
PHF20-201ENST00000339089 SMIM14Q96QK8 99 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms