RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 ADAMTS3O15072 1205 aa17.22■□□□□ 0.35
TRAPPC11-201ENST00000334690 TNK2Q07912 1038 aa17.22■□□□□ 0.35
TRAPPC11-201ENST00000334690 C16orf72Q14CZ0 275 aa17.22■□□□□ 0.35
TRAPPC11-201ENST00000334690 MARK4Q96L34 752 aa17.22■□□□□ 0.35
TRAPPC11-201ENST00000334690 GRIP2Q9C0E4 1043 aa17.22■□□□□ 0.35
TRAPPC11-201ENST00000334690 RAD21L1Q9H4I0 556 aa17.22■□□□□ 0.35
TRAPPC11-201ENST00000334690 GNPTGQ9UJJ9 305 aa17.22■□□□□ 0.35
TRAPPC11-201ENST00000334690 ADCY6O43306 1168 aa17.22■□□□□ 0.35
TRAPPC11-201ENST00000334690 PQBP1O60828 265 aaKnown RBP17.22■□□□□ 0.35
TRAPPC11-201ENST00000334690 EPN2O95208 641 aa17.22■□□□□ 0.35
TRAPPC11-201ENST00000334690 PURAQ00577 322 aaKnown RBP17.22■□□□□ 0.35
TRAPPC11-201ENST00000334690 SPIRE1Q08AE8 756 aa17.22■□□□□ 0.35
TRAPPC11-201ENST00000334690 B3GNT6Q6ZMB0 384 aa17.22■□□□□ 0.35
TRAPPC11-201ENST00000334690 PTCD2Q8WV60 388 aaKnown RBP17.22■□□□□ 0.35
TRAPPC11-201ENST00000334690 TFAP2BQ92481 460 aa17.22■□□□□ 0.35
TRAPPC11-201ENST00000334690 SLC4A5Q9BY07 1137 aa17.22■□□□□ 0.35
TRAPPC11-201ENST00000334690 OSGEPL1Q9H4B0 414 aa17.22■□□□□ 0.35
TRAPPC11-201ENST00000334690 PDZD7Q9H5P4 517 aa17.22■□□□□ 0.35
TRAPPC11-201ENST00000334690 APOBEC3GQ9HC16 384 aaKnown RBP17.22■□□□□ 0.35
TRAPPC11-201ENST00000334690 SNX6Q9UNH7 406 aa17.22■□□□□ 0.35
TRAPPC11-201ENST00000334690 PRR23D1E9PI22 279 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 HSMCR30P0CW71 290 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 PRR23D2P0DMB1 279 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 HNRNPLP14866 589 aaKnown RBP eCLIP17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 CERCAMQ5T4B2 595 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 PMF1Q6P1K2 205 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 C16orf59Q7L2K0 433 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 METTL3Q86U44 580 aaKnown RBP17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 C8orf59Q8N0T1 100 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 OR52K2Q8NGK3 314 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 RTKNQ9BST9 563 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 TBCDQ9BTW9 1192 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 YIPF2Q9BWQ6 316 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 PACSIN3Q9UKS6 424 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 DUSP12Q9UNI6 340 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 PTGES3LE9PB15 166 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 ABLIM1O14639 778 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 PGK1P00558 417 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 FNBP1LQ5T0N5 605 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 GPRIN3Q6ZVF9 776 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 ATL1Q8WXF7 558 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 LPPQ93052 612 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 REEP1Q9H902 201 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 C1orf232A0A0U1RR37 186 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 GCATO75600 419 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 PABPC1P11940 636 aaKnown RBP17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 CDC25CP30307 473 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 HPCAL1P37235 193 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 POLD2P49005 469 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 MAXP61244 160 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 KLF10Q13118 480 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 ARMCX4Q5H9R4 360 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 TSPAN14Q8NG11 270 aa17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 CORO1CQ9ULV4 474 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC11-201ENST00000334690 ATP6AP2A0A1C7CYW4 349 aa17.21■□□□□ 0.34
TRAPPC11-201ENST00000334690 C2CD4BA6NLJ0 364 aa17.21■□□□□ 0.34
TRAPPC11-201ENST00000334690 KPNA5O15131 536 aa17.21■□□□□ 0.34
TRAPPC11-201ENST00000334690 ATP6AP2O75787 350 aa17.21■□□□□ 0.34
TRAPPC11-201ENST00000334690 TM7SF2O76062 418 aa17.21■□□□□ 0.34
TRAPPC11-201ENST00000334690 RPN2P04844 631 aa17.21■□□□□ 0.34
TRAPPC11-201ENST00000334690 HTR7P34969 479 aa17.21■□□□□ 0.34
TRAPPC11-201ENST00000334690 SNRPD1P62314 119 aaKnown RBP17.21■□□□□ 0.34
TRAPPC11-201ENST00000334690 DCTN2Q13561 401 aaKnown RBP17.21■□□□□ 0.34
TRAPPC11-201ENST00000334690 MAGEE2Q8TD90 523 aaPredicted RBP17.21■□□□□ 0.34
TRAPPC11-201ENST00000334690 SLCO2A1Q92959 643 aa17.21■□□□□ 0.34
TRAPPC11-201ENST00000334690 TSC22D4Q9Y3Q8 395 aa17.21■□□□□ 0.34
TRAPPC11-201ENST00000334690 MFSD11O43934 449 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 PAGE1O75459 146 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 OTCP00480 354 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 IDO1P14902 403 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 ALDH9A1P49189 494 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 FKBP1BP68106 108 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 POU5F1Q01860 360 aaKnown RBP17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 HSPA14Q0VDF9 509 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 PAGE2BQ5JRK9 111 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 DNAJB14Q8TBM8 379 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 C3orf18Q9UK00 162 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 CNTNAP1P78357 1384 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 ATRNL1Q5VV63 1379 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 SLIT2O94813 1529 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 OR6C75A6NL08 312 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 SNAP91O60641 907 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 AP2A1O95782 977 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 ABCB1P08183 1280 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 CD52P31358 61 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 INTS11Q5TA45 600 aaKnown RBP17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 ANKRD22Q5VYY1 191 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 GSTCDQ8NEC7 633 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 OR4L1Q8NH43 312 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 TRAF6Q9Y4K3 522 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 LTN1O94822 1766 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 ST13P50502 369 aaKnown RBP17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 PQLC1Q8N2U9 271 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 CDYL2Q8N8U2 506 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 ZDHHC18Q9NUE0 388 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 KLHL3Q9UH77 587 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 LMO7Q8WWI1 1683 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 TULP2O00295 520 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 TRIM24O15164 1050 aa17.2■□□□□ 0.34
TRAPPC11-201ENST00000334690 TLR5O60602 858 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms