RNA–Protein interactions for RNA: ENST00000617219.1

CFHR3-206, Transcript of complement factor H related 3, humanhuman

TSL 5 BASIC

Gene CFHR3, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-206ENST00000617219 KRTAP4-4Q9BYR3 166 aa4.73□□□□□ -1.65
CFHR3-206ENST00000617219 TPSD1Q9BZJ3 242 aa4.73□□□□□ -1.65
CFHR3-206ENST00000617219 INO80BQ9C086 356 aaPredicted RBP4.73□□□□□ -1.65
CFHR3-206ENST00000617219 MS4A7Q9GZW8 240 aaPredicted RBP4.73□□□□□ -1.65
CFHR3-206ENST00000617219 BTBD1Q9H0C5 482 aa4.73□□□□□ -1.65
CFHR3-206ENST00000617219 TLE6Q9H808 572 aa4.73□□□□□ -1.65
CFHR3-206ENST00000617219 ANKEF1Q9NU02 776 aa4.73□□□□□ -1.65
CFHR3-206ENST00000617219 TBC1D13Q9NVG8 400 aa4.73□□□□□ -1.65
CFHR3-206ENST00000617219 LRIT1Q9P2V4 623 aa4.73□□□□□ -1.65
CFHR3-206ENST00000617219 CPNE7Q9UBL6 633 aa4.73□□□□□ -1.65
CFHR3-206ENST00000617219 DNAJB4Q9UDY4 337 aa4.73□□□□□ -1.65
CFHR3-206ENST00000617219 CDH22Q9UJ99 828 aa4.73□□□□□ -1.65
CFHR3-206ENST00000617219 NOL7Q9UMY1 257 aaKnown RBP4.73□□□□□ -1.65
CFHR3-206ENST00000617219 PCDHGB6Q9Y5F9 930 aa4.73□□□□□ -1.65
CFHR3-206ENST00000617219 COL4A3Q01955 1670 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 ARID2Q68CP9 1835 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 GRID2IPA4D2P6 1211 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 ARHGEF35A5YM69 484 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 LRRIQ4A6NIV6 560 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 F8W810 466 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 YY2O15391 372 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 DDHD2O94830 711 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 ERLIN2O94905 339 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 EDN1P05305 212 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 MYL1P05976 194 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 PPP3CBP16298 524 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 ARF4P18085 180 aaPredicted RBP4.72□□□□□ -1.65
CFHR3-206ENST00000617219 SP100P23497 879 aaPredicted RBP4.72□□□□□ -1.65
CFHR3-206ENST00000617219 U2AF2P26368 475 aaKnown RBP eCLIP4.72□□□□□ -1.65
CFHR3-206ENST00000617219 CCT6AP40227 531 aaKnown RBP4.72□□□□□ -1.65
CFHR3-206ENST00000617219 MLH1P40692 756 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 FOLR3P41439 243 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 SLC11A1P49279 550 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 LILRA4P59901 499 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 KRT17Q04695 432 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 RNASELQ05823 741 aaKnown RBP4.72□□□□□ -1.65
CFHR3-206ENST00000617219 BOP1Q14137 746 aaKnown RBP4.72□□□□□ -1.65
CFHR3-206ENST00000617219 TFDP1Q14186 410 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 GALEQ14376 348 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 MXD4Q14582 209 aaPredicted RBP4.72□□□□□ -1.65
CFHR3-206ENST00000617219 ZRSR1Q15695 479 aaKnown RBP4.72□□□□□ -1.65
CFHR3-206ENST00000617219 DUSP6Q16828 381 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 ERCC6LQ2NKX8 1250 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 TEDDM1Q5T9Z0 273 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 ICE2Q659A1 982 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 NOTUMQ6P988 496 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 VWA1Q6PCB0 445 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 ERMNQ8TAM6 284 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 MRPS27Q92552 414 aaKnown RBP4.72□□□□□ -1.65
CFHR3-206ENST00000617219 FAM136AQ96C01 138 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 NMD3Q96D46 503 aaKnown RBP4.72□□□□□ -1.65
CFHR3-206ENST00000617219 FBXL20Q96IG2 436 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 MSLNLQ96KJ4 702 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 POLR3CQ9BUI4 534 aaPredicted RBP4.72□□□□□ -1.65
CFHR3-206ENST00000617219 PTDSS2Q9BVG9 487 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 VN1R3Q9BXE9 311 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 MRPL9Q9BYD2 267 aaKnown RBP4.72□□□□□ -1.65
CFHR3-206ENST00000617219 TOR3AQ9H497 397 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 NXF3Q9H4D5 531 aaKnown RBP4.72□□□□□ -1.65
CFHR3-206ENST00000617219 EPHX3Q9H6B9 360 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 UPF2Q9HAU5 1272 aaKnown RBP4.72□□□□□ -1.65
CFHR3-206ENST00000617219 TUFT1Q9NNX1 390 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 CHST12Q9NRB3 414 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 DDX19AQ9NUU7 478 aaKnown RBP4.72□□□□□ -1.65
CFHR3-206ENST00000617219 SYBUQ9NX95 663 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 SPG21Q9NZD8 308 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 CACNG4Q9UBN1 327 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 LRWD1Q9UFC0 647 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 CD207Q9UJ71 328 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 PACSIN3Q9UKS6 424 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 FAM50BQ9Y247 325 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 PRG3Q9Y2Y8 225 aaPredicted RBP4.72□□□□□ -1.65
CFHR3-206ENST00000617219 SNX13Q9Y5W8 968 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 KAT6AQ92794 2004 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 LOXHD1Q8IVV2 1947 aa4.72□□□□□ -1.65
CFHR3-206ENST00000617219 FNDC1Q4ZHG4 1894 aaPredicted RBP4.71□□□□□ -1.65
CFHR3-206ENST00000617219 PLXNA4Q9HCM2 1894 aa4.71□□□□□ -1.65
CFHR3-206ENST00000617219 TTC28Q96AY4 2481 aa4.71□□□□□ -1.66
CFHR3-206ENST00000617219 MBD3L4A6NDZ8 208 aaPredicted RBP4.71□□□□□ -1.66
CFHR3-206ENST00000617219 MBD3L3A6NE82 208 aaPredicted RBP4.71□□□□□ -1.66
CFHR3-206ENST00000617219 ARL5CA6NH57 179 aa4.71□□□□□ -1.66
CFHR3-206ENST00000617219 E9PMD0 336 aa4.71□□□□□ -1.66
CFHR3-206ENST00000617219 H3BQV1 296 aa4.71□□□□□ -1.66
CFHR3-206ENST00000617219 DCLK1O15075 740 aa4.71□□□□□ -1.66
CFHR3-206ENST00000617219 MBTPS2O43462 519 aa4.71□□□□□ -1.66
CFHR3-206ENST00000617219 PROM1O43490 865 aa4.71□□□□□ -1.66
CFHR3-206ENST00000617219 GALTP07902 379 aa4.71□□□□□ -1.66
CFHR3-206ENST00000617219 RPA1P27694 616 aa4.71□□□□□ -1.66
CFHR3-206ENST00000617219 PPIFP30405 207 aaKnown RBP4.71□□□□□ -1.66
CFHR3-206ENST00000617219 PPM1AP35813 382 aa4.71□□□□□ -1.66
CFHR3-206ENST00000617219 TRAPPC10P48553 1259 aa4.71□□□□□ -1.66
CFHR3-206ENST00000617219 ALDH7A1P49419 539 aaKnown RBP4.71□□□□□ -1.66
CFHR3-206ENST00000617219 SEC24CP53992 1094 aa4.71□□□□□ -1.66
CFHR3-206ENST00000617219 TBX4P57082 545 aa4.71□□□□□ -1.66
CFHR3-206ENST00000617219 MRPS35P82673 323 aaKnown RBP4.71□□□□□ -1.66
CFHR3-206ENST00000617219 FMO1Q01740 532 aa4.71□□□□□ -1.66
CFHR3-206ENST00000617219 UBE3AQ05086 875 aa4.71□□□□□ -1.66
CFHR3-206ENST00000617219 E2F2Q14209 437 aa4.71□□□□□ -1.66
CFHR3-206ENST00000617219 HAUS3Q68CZ6 603 aa4.71□□□□□ -1.66
CFHR3-206ENST00000617219 C11orf96Q7Z7L8 435 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms