RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 RAD51BO15315 384 aa20.92■□□□□ 0.94
HIF1A-206ENST00000553999 CBFA2T2O43439 604 aa20.92■□□□□ 0.94
HIF1A-206ENST00000553999 POP4O95707 220 aaKnown RBP20.92■□□□□ 0.94
HIF1A-206ENST00000553999 PAK4O96013 591 aaPredicted RBP20.92■□□□□ 0.94
HIF1A-206ENST00000553999 HNRNPA2B1P22626 353 aaKnown RBP20.92■□□□□ 0.94
HIF1A-206ENST00000553999 AMPD1P23109 780 aa20.92■□□□□ 0.94
HIF1A-206ENST00000553999 EPHA8P29322 1005 aaPredicted RBP20.92■□□□□ 0.94
HIF1A-206ENST00000553999 RGRP47804 291 aa20.92■□□□□ 0.94
HIF1A-206ENST00000553999 ST3GAL2Q16842 350 aa20.92■□□□□ 0.94
HIF1A-206ENST00000553999 ZNF542PQ5EBM4 170 aa20.92■□□□□ 0.94
HIF1A-206ENST00000553999 GCNT7Q6ZNI0 430 aa20.92■□□□□ 0.94
HIF1A-206ENST00000553999 ARHGAP12Q8IWW6 846 aa20.92■□□□□ 0.94
HIF1A-206ENST00000553999 PAF1Q8N7H5 531 aa20.92■□□□□ 0.94
HIF1A-206ENST00000553999 VOPP1Q96AW1 172 aa20.92■□□□□ 0.94
HIF1A-206ENST00000553999 WRAP53Q9BUR4 548 aaKnown RBP20.92■□□□□ 0.94
HIF1A-206ENST00000553999 PDFQ9HBH1 243 aa20.92■□□□□ 0.94
HIF1A-206ENST00000553999 ETNK2Q9NVF9 386 aa20.92■□□□□ 0.94
HIF1A-206ENST00000553999 FTSJ1Q9UET6 329 aa20.92■□□□□ 0.94
HIF1A-206ENST00000553999 H3BRJ5 948 aa20.91■□□□□ 0.94
HIF1A-206ENST00000553999 SPINT1O43278 529 aa20.91■□□□□ 0.94
HIF1A-206ENST00000553999 PRAMEF11O60813 436 aa20.91■□□□□ 0.94
HIF1A-206ENST00000553999 RARAP10276 462 aa20.91■□□□□ 0.94
HIF1A-206ENST00000553999 ARRB1P49407 418 aaPredicted RBP20.91■□□□□ 0.94
HIF1A-206ENST00000553999 NDST2P52849 883 aa20.91■□□□□ 0.94
HIF1A-206ENST00000553999 CLDN6P56747 220 aa20.91■□□□□ 0.94
HIF1A-206ENST00000553999 HNRNPDQ14103 355 aaKnown RBP20.91■□□□□ 0.94
HIF1A-206ENST00000553999 TMEM259Q4ZIN3 620 aa20.91■□□□□ 0.94
HIF1A-206ENST00000553999 SPECC1LQ69YQ0 1117 aa20.91■□□□□ 0.94
HIF1A-206ENST00000553999 TTC7BQ86TV6 843 aa20.91■□□□□ 0.94
HIF1A-206ENST00000553999 TMEM145Q8NBT3 493 aa20.91■□□□□ 0.94
HIF1A-206ENST00000553999 BAHD1Q8TBE0 780 aaPredicted RBP20.91■□□□□ 0.94
HIF1A-206ENST00000553999 ZNF564Q8TBZ8 553 aaPredicted RBP20.91■□□□□ 0.94
HIF1A-206ENST00000553999 IQCDQ96DY2 449 aa20.91■□□□□ 0.94
HIF1A-206ENST00000553999 FEM1CQ96JP0 617 aa20.91■□□□□ 0.94
HIF1A-206ENST00000553999 SLC17A9Q9BYT1 436 aa20.91■□□□□ 0.94
HIF1A-206ENST00000553999 DEF6Q9H4E7 631 aa20.91■□□□□ 0.94
HIF1A-206ENST00000553999 CTTNBP2NLQ9P2B4 639 aa20.91■□□□□ 0.94
HIF1A-206ENST00000553999 TPX2Q9ULW0 747 aaKnown RBP20.91■□□□□ 0.94
HIF1A-206ENST00000553999 APOBEC2Q9Y235 224 aaKnown RBP20.91■□□□□ 0.94
HIF1A-206ENST00000553999 TTC24A2A3L6 582 aaPredicted RBP20.9■□□□□ 0.94
HIF1A-206ENST00000553999 PCDHGA12O60330 932 aa20.9■□□□□ 0.94
HIF1A-206ENST00000553999 MMP20O60882 483 aa20.9■□□□□ 0.94
HIF1A-206ENST00000553999 CYP1A2P05177 515 aa20.9■□□□□ 0.94
HIF1A-206ENST00000553999 XPAP23025 273 aaPredicted RBP20.9■□□□□ 0.94
HIF1A-206ENST00000553999 ARL4AP40617 200 aa20.9■□□□□ 0.94
HIF1A-206ENST00000553999 ADKP55263 362 aaKnown RBP20.9■□□□□ 0.94
HIF1A-206ENST00000553999 RPS21P63220 83 aaKnown RBP20.9■□□□□ 0.94
HIF1A-206ENST00000553999 RAD51Q06609 339 aa20.9■□□□□ 0.94
HIF1A-206ENST00000553999 MMRN1Q13201 1228 aa20.9■□□□□ 0.94
HIF1A-206ENST00000553999 DNAJC3Q13217 504 aa20.9■□□□□ 0.94
HIF1A-206ENST00000553999 DPYSQ14117 519 aa20.9■□□□□ 0.94
HIF1A-206ENST00000553999 KRT81Q14533 505 aa20.9■□□□□ 0.94
HIF1A-206ENST00000553999 UNQ6494/PRO21346Q6UXR6 183 aa20.9■□□□□ 0.94
HIF1A-206ENST00000553999 TSEN2Q8NCE0 465 aaKnown RBP20.9■□□□□ 0.94
HIF1A-206ENST00000553999 CINPQ9BW66 212 aaPredicted RBP20.9■□□□□ 0.94
HIF1A-206ENST00000553999 IP6K2Q9UHH9 426 aa20.9■□□□□ 0.94
HIF1A-206ENST00000553999 COQ6Q9Y2Z9 468 aa20.9■□□□□ 0.94
HIF1A-206ENST00000553999 PCNX2A6NKB5 2137 aa20.9■□□□□ 0.94
HIF1A-206ENST00000553999 FFAR2O15552 330 aa20.89■□□□□ 0.93
HIF1A-206ENST00000553999 PALMO75781 387 aa20.89■□□□□ 0.93
HIF1A-206ENST00000553999 HTR7P34969 479 aa20.89■□□□□ 0.93
HIF1A-206ENST00000553999 PCK1P35558 622 aa20.89■□□□□ 0.93
HIF1A-206ENST00000553999 NUDT1P36639 197 aa20.89■□□□□ 0.93
HIF1A-206ENST00000553999 SGCGQ13326 291 aa20.89■□□□□ 0.93
HIF1A-206ENST00000553999 PIGHQ14442 188 aaPredicted RBP20.89■□□□□ 0.93
HIF1A-206ENST00000553999 INAVAQ3KP66 663 aa20.89■□□□□ 0.93
HIF1A-206ENST00000553999 CFAP58Q5T655 872 aa20.89■□□□□ 0.93
HIF1A-206ENST00000553999 KIAA1161Q6NSJ0 714 aa20.89■□□□□ 0.93
HIF1A-206ENST00000553999 NEK5Q6P3R8 708 aa20.89■□□□□ 0.93
HIF1A-206ENST00000553999 Q6ZSR6 202 aa20.89■□□□□ 0.93
HIF1A-206ENST00000553999 CAMK1DQ8IU85 385 aa20.89■□□□□ 0.93
HIF1A-206ENST00000553999 SAP25Q8TEE9 199 aa20.89■□□□□ 0.93
HIF1A-206ENST00000553999 CASKIN2Q8WXE0 1202 aa20.89■□□□□ 0.93
HIF1A-206ENST00000553999 CNDP2Q96KP4 475 aaKnown RBP20.89■□□□□ 0.93
HIF1A-206ENST00000553999 CDC6Q99741 560 aa20.89■□□□□ 0.93
HIF1A-206ENST00000553999 OSBPL1AQ9BXW6 950 aa20.89■□□□□ 0.93
HIF1A-206ENST00000553999 PCDH18Q9HCL0 1135 aa20.89■□□□□ 0.93
HIF1A-206ENST00000553999 SPTLC3Q9NUV7 552 aa20.89■□□□□ 0.93
HIF1A-206ENST00000553999 TOR4AQ9NXH8 423 aa20.89■□□□□ 0.93
HIF1A-206ENST00000553999 POM121BA6NF01 834 aa20.88■□□□□ 0.93
HIF1A-206ENST00000553999 DFNA5O60443 496 aa20.88■□□□□ 0.93
HIF1A-206ENST00000553999 CD48P09326 243 aa20.88■□□□□ 0.93
HIF1A-206ENST00000553999 CDH6P55285 790 aa20.88■□□□□ 0.93
HIF1A-206ENST00000553999 SLC25A11Q02978 314 aaKnown RBP20.88■□□□□ 0.93
HIF1A-206ENST00000553999 ATP13A4Q4VNC1 1196 aa20.88■□□□□ 0.93
HIF1A-206ENST00000553999 INO80DQ53TQ3 878 aaPredicted RBP20.88■□□□□ 0.93
HIF1A-206ENST00000553999 TMCO3Q6UWJ1 677 aa20.88■□□□□ 0.93
HIF1A-206ENST00000553999 DBX2Q6ZNG2 339 aa20.88■□□□□ 0.93
HIF1A-206ENST00000553999 POLNQ7Z5Q5 900 aa20.88■□□□□ 0.93
HIF1A-206ENST00000553999 RAB44Q7Z6P3 723 aaPredicted RBP20.88■□□□□ 0.93
HIF1A-206ENST00000553999 VSTM4Q8IW00 320 aa20.88■□□□□ 0.93
HIF1A-206ENST00000553999 PLPP6Q8IY26 295 aa20.88■□□□□ 0.93
HIF1A-206ENST00000553999 SLC22A18ASQ8N1D0 253 aa20.88■□□□□ 0.93
HIF1A-206ENST00000553999 LRIG1Q96JA1 1093 aa20.88■□□□□ 0.93
HIF1A-206ENST00000553999 CSPG4P5Q96PW8 444 aa20.88■□□□□ 0.93
HIF1A-206ENST00000553999 UCKL1Q9NWZ5 548 aa20.88■□□□□ 0.93
HIF1A-206ENST00000553999 DNAJC28Q9NX36 388 aa20.88■□□□□ 0.93
HIF1A-206ENST00000553999 IPO11Q9UI26 975 aaKnown RBP20.88■□□□□ 0.93
HIF1A-206ENST00000553999 FAM149AA5PLN7 773 aa20.87■□□□□ 0.93
HIF1A-206ENST00000553999 A6NNZ2 444 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms