RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 ZNF805Q5CZA5 627 aa11.73□□□□□ -0.53
PRPF40B-212ENST00000551111 PERM1Q5SV97 790 aa11.73□□□□□ -0.53
PRPF40B-212ENST00000551111 WDR59Q6PJI9 974 aa11.73□□□□□ -0.53
PRPF40B-212ENST00000551111 LRRC69Q6ZNQ3 347 aa11.73□□□□□ -0.53
PRPF40B-212ENST00000551111 FAM181AQ8N9Y4 354 aa11.73□□□□□ -0.53
PRPF40B-212ENST00000551111 IFI44Q8TCB0 444 aa11.73□□□□□ -0.53
PRPF40B-212ENST00000551111 FAM172AQ8WUF8 416 aa11.73□□□□□ -0.53
PRPF40B-212ENST00000551111 SLC39A7Q92504 469 aa11.73□□□□□ -0.53
PRPF40B-212ENST00000551111 FUBP1Q96AE4 644 aaKnown RBP11.73□□□□□ -0.53
PRPF40B-212ENST00000551111 ISG20Q96AZ6 181 aaKnown RBP11.73□□□□□ -0.53
PRPF40B-212ENST00000551111 CENPTQ96BT3 561 aa11.73□□□□□ -0.53
PRPF40B-212ENST00000551111 IFT43Q96FT9 208 aa11.73□□□□□ -0.53
PRPF40B-212ENST00000551111 PPP1R16AQ96I34 528 aa11.73□□□□□ -0.53
PRPF40B-212ENST00000551111 LENG8Q96PV6 779 aaPredicted RBP11.73□□□□□ -0.53
PRPF40B-212ENST00000551111 TMEM248Q9NWD8 314 aa11.73□□□□□ -0.53
PRPF40B-212ENST00000551111 SIK3Q9Y2K2 1263 aa11.73□□□□□ -0.53
PRPF40B-212ENST00000551111 COQ6Q9Y2Z9 468 aa11.73□□□□□ -0.53
PRPF40B-212ENST00000551111 PIEZO2Q9H5I5 2752 aa11.72□□□□□ -0.53
PRPF40B-212ENST00000551111 CPED1A4D0V7 1026 aa11.72□□□□□ -0.53
PRPF40B-212ENST00000551111 RRP8O43159 456 aaKnown RBP11.72□□□□□ -0.53
PRPF40B-212ENST00000551111 TMCC1O94876 653 aa11.72□□□□□ -0.53
PRPF40B-212ENST00000551111 TIMP2P16035 220 aa11.72□□□□□ -0.53
PRPF40B-212ENST00000551111 SDC4P31431 198 aa11.72□□□□□ -0.53
PRPF40B-212ENST00000551111 SOX5P35711 763 aa11.72□□□□□ -0.53
PRPF40B-212ENST00000551111 HNRNPKP61978 463 aaKnown RBP eCLIP11.72□□□□□ -0.53
PRPF40B-212ENST00000551111 GABREP78334 506 aa11.72□□□□□ -0.53
PRPF40B-212ENST00000551111 CCDC15Q0P6D6 951 aa11.72□□□□□ -0.53
PRPF40B-212ENST00000551111 TCEA2Q15560 299 aa11.72□□□□□ -0.53
PRPF40B-212ENST00000551111 MYLK3Q32MK0 819 aa11.72□□□□□ -0.53
PRPF40B-212ENST00000551111 CDKAL1Q5VV42 579 aa11.72□□□□□ -0.53
PRPF40B-212ENST00000551111 KCTD16Q68DU8 428 aa11.72□□□□□ -0.53
PRPF40B-212ENST00000551111 VPS36Q86VN1 386 aa11.72□□□□□ -0.53
PRPF40B-212ENST00000551111 OR2AP1Q8NGE2 309 aa11.72□□□□□ -0.53
PRPF40B-212ENST00000551111 LMX1AQ8TE12 382 aa11.72□□□□□ -0.53
PRPF40B-212ENST00000551111 HIC2Q96JB3 615 aa11.72□□□□□ -0.53
PRPF40B-212ENST00000551111 EXOC2Q96KP1 924 aa11.72□□□□□ -0.53
PRPF40B-212ENST00000551111 UBL7Q96S82 380 aaPredicted RBP11.72□□□□□ -0.53
PRPF40B-212ENST00000551111 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.72□□□□□ -0.53
PRPF40B-212ENST00000551111 CLPBQ9H078 707 aa11.72□□□□□ -0.53
PRPF40B-212ENST00000551111 NUP62CLQ9H1M0 184 aa11.72□□□□□ -0.53
PRPF40B-212ENST00000551111 CPNE5Q9HCH3 593 aa11.72□□□□□ -0.53
PRPF40B-212ENST00000551111 ASCL3Q9NQ33 180 aa11.72□□□□□ -0.53
PRPF40B-212ENST00000551111 AHCTF1Q8WYP5 2266 aa11.72□□□□□ -0.53
PRPF40B-212ENST00000551111 ZNF462Q96JM2 2506 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 ZFC3H1O60293 1989 aaKnown RBP11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 TCRBV5S1A1TA0A578 114 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 NEMP1O14524 444 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 FPGTO14772 594 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 ATXN7O15265 892 aaPredicted RBP11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 AQP9O43315 295 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 TSPAN6O43657 245 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 KDELR3O43731 214 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 POP4O95707 220 aaKnown RBP11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 GSRP00390 522 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 EEF1GP26641 437 aaKnown RBP11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 ACTN2P35609 894 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 PTPN9P43378 593 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 RABIFP47224 123 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 MAPKAPK2P49137 400 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 RPL7AP62424 266 aaKnown RBP11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 CXADRP78310 365 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 SGCGQ13326 291 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 POLD3Q15054 466 aaPredicted RBP11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 CYTH1Q15438 398 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 ISXQ2M1V0 245 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 PRRT3Q5FWE3 981 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 ACBD5Q5T8D3 534 aaPredicted RBP11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 EFL1Q7Z2Z2 1120 aaKnown RBP11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 TTC7BQ86TV6 843 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 PARGQ86W56 976 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 DNAAF5Q86Y56 855 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 DCP2Q8IU60 420 aaKnown RBP11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 PLPP6Q8IY26 295 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 SLC35F3Q8IY50 421 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 MAPK15Q8TD08 544 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 TBC1D31Q96DN5 1066 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 HMCESQ96FZ2 354 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 ATXN7L3BQ96GX2 97 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 PRR11Q96HE9 360 aaPredicted RBP11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 WRAP53Q9BUR4 548 aaKnown RBP11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 MAGEH1Q9H213 219 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 LMBRD1Q9NUN5 540 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 FANCLQ9NW38 375 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 CHMP5Q9NZZ3 219 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 IPO11Q9UI26 975 aaKnown RBP11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 SATB2Q9UPW6 733 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 ENTPD2Q9Y5L3 495 aa11.71□□□□□ -0.53
PRPF40B-212ENST00000551111 TENM4Q6N022 2769 aa11.71□□□□□ -0.54
PRPF40B-212ENST00000551111 NEMP2A6NFY4 417 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 EIF4E1BA6NMX2 242 aaKnown RBP11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 MUSKO15146 869 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 CCP110O43303 1012 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 BUB1O43683 1085 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 RAMP2O60895 175 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 PIGNO95427 931 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 ALPPL2P10696 532 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 KRT3P12035 628 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 LSSP48449 732 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 PDX1P52945 283 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 ADKP55263 362 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms