RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 CYP4F12Q9HCS2 524 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 Q9Y3F1 56 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 TLL2Q9Y6L7 1015 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 CDH23Q9H251 3354 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 MANSC4A6NHS7 340 aaPredicted RBP14.95□□□□□ -0.02
DDX55-209ENST00000542286 E9PAM4 449 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 TNFRSF10BO14763 440 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 NCAM2O15394 837 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 GRIA4P48058 902 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 AP2B1P63010 937 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 EFEMP1Q12805 493 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 MAP7Q14244 749 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 PSMD5Q16401 504 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 ZNF470Q6ECI4 717 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 RGMBQ6NW40 437 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 MRPL10Q7Z7H8 261 aaKnown RBP14.95□□□□□ -0.02
DDX55-209ENST00000542286 HPS6Q86YV9 775 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 FSTL5Q8N475 847 aaPredicted RBP14.95□□□□□ -0.02
DDX55-209ENST00000542286 RNF148Q8N7C7 305 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 SOCS4Q8WXH5 440 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 NOL6Q9H6R4 1146 aaKnown RBP14.95□□□□□ -0.02
DDX55-209ENST00000542286 SUDS3Q9H7L9 328 aaPredicted RBP14.95□□□□□ -0.02
DDX55-209ENST00000542286 ZFYVE28Q9HCC9 887 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 NT5MQ9NPB1 228 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 XPR1Q9UBH6 696 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 TRHDEQ9UKU6 1024 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 KCTD3Q9Y597 815 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 ZNF236Q9UL36 1845 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 MAGEC1O60732 1142 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 PFDN1O60925 122 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 TM7SF2O76062 418 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 PIGNO95427 931 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 IGLV3-25P01717 112 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 ASLP04424 464 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 PIRTP0C851 137 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 TSPY1Q01534 308 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 SLC10A7Q0GE19 358 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 MBTPS1Q14703 1052 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 ARL13AQ5H913 290 aaPredicted RBP14.94□□□□□ -0.02
DDX55-209ENST00000542286 ACBD5Q5T8D3 534 aaPredicted RBP14.94□□□□□ -0.02
DDX55-209ENST00000542286 NAPEPLDQ6IQ20 393 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 CNSTQ6PJW8 725 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 NMD3Q96D46 503 aaKnown RBP14.94□□□□□ -0.02
DDX55-209ENST00000542286 C1QTNF1Q9BXJ1 281 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 FSD1LQ9BXM9 530 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 CHST12Q9NRB3 414 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 ZDHHC2Q9UIJ5 367 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 hCG_2014768A0A024R1R8 64 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 NT5C1B-RDH14C9J2C7 533 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 PRKAR2AP13861 404 aaKnown RBP14.94□□□□□ -0.02
DDX55-209ENST00000542286 TSPAN8P19075 237 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 CCR1P32246 355 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 HARS2P49590 506 aaKnown RBP14.94□□□□□ -0.02
DDX55-209ENST00000542286 PRPSAP1Q14558 356 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 MYLK4Q86YV6 388 aaPredicted RBP14.94□□□□□ -0.02
DDX55-209ENST00000542286 DEFB107AQ8IZN7 70 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 RAB3IL1Q8TBN0 382 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 MRGPRX2Q96LB1 330 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 TSPAN18Q96SJ8 248 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 RHBDL2Q9NX52 303 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 ARHGEF38Q9NXL2 777 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 GMIPQ9P107 970 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 TLK1Q9UKI8 766 aa14.94□□□□□ -0.02
DDX55-209ENST00000542286 M0QZQ0 153 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 TRIM13O60858 407 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 MT-CO1P00395 513 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 FAM163BP0C2L3 166 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 HNRNPLP14866 589 aaKnown RBP eCLIP14.93□□□□□ -0.02
DDX55-209ENST00000542286 GRIA2P42262 883 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 NPY2RP49146 381 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 AIF1P55008 147 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 SH3BGRP55822 239 aaPredicted RBP14.93□□□□□ -0.02
DDX55-209ENST00000542286 TAS2R39P59534 338 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 DSC2Q02487 901 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 DSC3Q14574 896 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 CLLU1OSQ5K130 101 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 PKN3Q6P5Z2 889 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 NET1Q7Z628 596 aaPredicted RBP14.93□□□□□ -0.02
DDX55-209ENST00000542286 HMCESQ96FZ2 354 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 ELMO2Q96JJ3 720 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 MCMBPQ9BTE3 642 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 CDH19Q9H159 772 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 CLIC5Q9NZA1 410 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 IPO11Q9UI26 975 aaKnown RBP14.93□□□□□ -0.02
DDX55-209ENST00000542286 PCDHB12Q9Y5F1 795 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 CIB2O75838 187 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 HDCP19113 662 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 AOC1P19801 751 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 EIF4EBP2Q13542 120 aaPredicted RBP14.93□□□□□ -0.02
DDX55-209ENST00000542286 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.93□□□□□ -0.02
DDX55-209ENST00000542286 C6orf163Q5TEZ5 329 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 NXNQ6DKJ4 435 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 ISLR2Q6UXK2 745 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 RNF111Q6ZNA4 994 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 OR6Y1Q8NGX8 325 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 LINC01599Q8WXQ3 324 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 MPP4Q96JB8 637 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 LENG8Q96PV6 779 aaPredicted RBP14.93□□□□□ -0.02
DDX55-209ENST00000542286 KIFC1Q9BW19 673 aa14.93□□□□□ -0.02
DDX55-209ENST00000542286 SPC25Q9HBM1 224 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms