RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 LPCAT2Q7L5N7 544 aa19.68■□□□□ 0.74
DDX55-207ENST00000540763 SRLQ86TD4 932 aa19.68■□□□□ 0.74
DDX55-207ENST00000540763 HDDC3Q8N4P3 179 aa19.68■□□□□ 0.74
DDX55-207ENST00000540763 SUMF1Q8NBK3 374 aa19.68■□□□□ 0.74
DDX55-207ENST00000540763 CADM4Q8NFZ8 388 aa19.68■□□□□ 0.74
DDX55-207ENST00000540763 OR6K2Q8NGY2 324 aa19.68■□□□□ 0.74
DDX55-207ENST00000540763 TFB1MQ8WVM0 346 aaKnown RBP19.68■□□□□ 0.74
DDX55-207ENST00000540763 TOE1Q96GM8 510 aaKnown RBP19.68■□□□□ 0.74
DDX55-207ENST00000540763 EXOC2Q96KP1 924 aa19.68■□□□□ 0.74
DDX55-207ENST00000540763 ZNF641Q96N77 438 aaPredicted RBP19.68■□□□□ 0.74
DDX55-207ENST00000540763 HERPUD2Q9BSE4 406 aa19.68■□□□□ 0.74
DDX55-207ENST00000540763 POLR1EQ9GZS1 481 aaKnown RBP19.68■□□□□ 0.74
DDX55-207ENST00000540763 DKK3Q9UBP4 350 aa19.68■□□□□ 0.74
DDX55-207ENST00000540763 EVLQ9UI08 416 aaPredicted RBP19.68■□□□□ 0.74
DDX55-207ENST00000540763 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.67■□□□□ 0.74
DDX55-207ENST00000540763 MUSKO15146 869 aa19.67■□□□□ 0.74
DDX55-207ENST00000540763 MAP3K13O43283 966 aa19.67■□□□□ 0.74
DDX55-207ENST00000540763 NDUFS2O75306 463 aa19.67■□□□□ 0.74
DDX55-207ENST00000540763 RNASEH2AO75792 299 aaKnown RBP19.67■□□□□ 0.74
DDX55-207ENST00000540763 LMNAP02545 664 aaKnown RBP19.67■□□□□ 0.74
DDX55-207ENST00000540763 RGRP47804 291 aa19.67■□□□□ 0.74
DDX55-207ENST00000540763 ID4P47928 161 aa19.67■□□□□ 0.74
DDX55-207ENST00000540763 NEK3P51956 506 aa19.67■□□□□ 0.74
DDX55-207ENST00000540763 AP1B1Q10567 949 aa19.67■□□□□ 0.74
DDX55-207ENST00000540763 AGBL4Q5VU57 503 aa19.67■□□□□ 0.74
DDX55-207ENST00000540763 LAIR1Q6GTX8 287 aa19.67■□□□□ 0.74
DDX55-207ENST00000540763 AADACL2Q6P093 401 aa19.67■□□□□ 0.74
DDX55-207ENST00000540763 GDPD4Q6W3E5 623 aa19.67■□□□□ 0.74
DDX55-207ENST00000540763 ERN2Q76MJ5 926 aaKnown RBP19.67■□□□□ 0.74
DDX55-207ENST00000540763 PGBD5Q8N414 524 aa19.67■□□□□ 0.74
DDX55-207ENST00000540763 FAM160A2Q8N612 972 aaPredicted RBP19.67■□□□□ 0.74
DDX55-207ENST00000540763 FRMD1Q8N878 549 aa19.67■□□□□ 0.74
DDX55-207ENST00000540763 GANCQ8TET4 914 aa19.67■□□□□ 0.74
DDX55-207ENST00000540763 SPOCK2Q92563 424 aa19.67■□□□□ 0.74
DDX55-207ENST00000540763 FOXJ1Q92949 421 aa19.67■□□□□ 0.74
DDX55-207ENST00000540763 ARRDC3Q96B67 414 aa19.67■□□□□ 0.74
DDX55-207ENST00000540763 ZNF419Q96HQ0 510 aaPredicted RBP19.67■□□□□ 0.74
DDX55-207ENST00000540763 QKIQ96PU8 341 aaKnown RBP eCLIP19.67■□□□□ 0.74
DDX55-207ENST00000540763 NEUROG2Q9H2A3 272 aa19.67■□□□□ 0.74
DDX55-207ENST00000540763 ATP13A3Q9H7F0 1226 aa19.67■□□□□ 0.74
DDX55-207ENST00000540763 SAE1Q9UBE0 346 aaPredicted RBP19.67■□□□□ 0.74
DDX55-207ENST00000540763 SERGEFQ9UGK8 458 aa19.67■□□□□ 0.74
DDX55-207ENST00000540763 ZNF292O60281 2723 aa19.66■□□□□ 0.74
DDX55-207ENST00000540763 A0A1W2PQ67 120 aa19.66■□□□□ 0.74
DDX55-207ENST00000540763 TSPAN11A1L157 253 aa19.66■□□□□ 0.74
DDX55-207ENST00000540763 C10orf142B7Z368 130 aa19.66■□□□□ 0.74
DDX55-207ENST00000540763 KCNK3O14649 394 aa19.66■□□□□ 0.74
DDX55-207ENST00000540763 PLRG1O43660 514 aaKnown RBP19.66■□□□□ 0.74
DDX55-207ENST00000540763 SOCS5O75159 536 aa19.66■□□□□ 0.74
DDX55-207ENST00000540763 NEBLO76041 1014 aa19.66■□□□□ 0.74
DDX55-207ENST00000540763 SEMA4FO95754 770 aa19.66■□□□□ 0.74
DDX55-207ENST00000540763 SERPINA4P29622 427 aa19.66■□□□□ 0.74
DDX55-207ENST00000540763 DPP6P42658 865 aa19.66■□□□□ 0.74
DDX55-207ENST00000540763 SUOXP51687 545 aa19.66■□□□□ 0.74
DDX55-207ENST00000540763 METAP1P53582 386 aa19.66■□□□□ 0.74
DDX55-207ENST00000540763 ADPRHP54922 357 aa19.66■□□□□ 0.74
DDX55-207ENST00000540763 OTUD4Q01804 1114 aaKnown RBP19.66■□□□□ 0.74
DDX55-207ENST00000540763 RPL6Q02878 288 aaKnown RBP19.66■□□□□ 0.74
DDX55-207ENST00000540763 CNTN1Q12860 1018 aa19.66■□□□□ 0.74
DDX55-207ENST00000540763 SLC45A4Q5BKX6 768 aa19.66■□□□□ 0.74
DDX55-207ENST00000540763 ZNF569Q5MCW4 686 aa19.66■□□□□ 0.74
DDX55-207ENST00000540763 PRR23BQ6ZRT6 265 aa19.66■□□□□ 0.74
DDX55-207ENST00000540763 ERMP1Q7Z2K6 904 aa19.66■□□□□ 0.74
DDX55-207ENST00000540763 ACTL9Q8TC94 416 aa19.66■□□□□ 0.74
DDX55-207ENST00000540763 RAB7BQ96AH8 199 aa19.66■□□□□ 0.74
DDX55-207ENST00000540763 VAT1Q99536 393 aa19.66■□□□□ 0.74
DDX55-207ENST00000540763 FERMT1Q9BQL6 677 aa19.66■□□□□ 0.74
DDX55-207ENST00000540763 FRMD8P1Q9BZ68 369 aaPredicted RBP19.66■□□□□ 0.74
DDX55-207ENST00000540763 NT5MQ9NPB1 228 aa19.66■□□□□ 0.74
DDX55-207ENST00000540763 RBM22Q9NW64 420 aaKnown RBP eCLIP19.66■□□□□ 0.743e-13■■■■■ 30.2
DDX55-207ENST00000540763 INVSQ9Y283 1065 aa19.66■□□□□ 0.74
DDX55-207ENST00000540763 ATP8A1Q9Y2Q0 1164 aa19.66■□□□□ 0.74
DDX55-207ENST00000540763 LRRC72A6NJI9 287 aa19.65■□□□□ 0.74
DDX55-207ENST00000540763 USP27XA6NNY8 438 aa19.65■□□□□ 0.74
DDX55-207ENST00000540763 UGT2B4P06133 528 aa19.65■□□□□ 0.74
DDX55-207ENST00000540763 ACSL1P33121 698 aa19.65■□□□□ 0.74
DDX55-207ENST00000540763 SCNN1BP51168 640 aa19.65■□□□□ 0.74
DDX55-207ENST00000540763 PIP5KL1Q5T9C9 394 aa19.65■□□□□ 0.74
DDX55-207ENST00000540763 NCEH1Q6PIU2 408 aa19.65■□□□□ 0.74
DDX55-207ENST00000540763 BRAT1Q6PJG6 821 aa19.65■□□□□ 0.74
DDX55-207ENST00000540763 FAM124AQ86V42 546 aa19.65■□□□□ 0.74
DDX55-207ENST00000540763 ZSCAN30Q86W11 494 aa19.65■□□□□ 0.74
DDX55-207ENST00000540763 CDKL3Q8IVW4 592 aaPredicted RBP19.65■□□□□ 0.74
DDX55-207ENST00000540763 SLC35F6Q8N357 371 aa19.65■□□□□ 0.74
DDX55-207ENST00000540763 OR2T34Q8NGX1 318 aa19.65■□□□□ 0.74
DDX55-207ENST00000540763 HAUS1Q96CS2 278 aa19.65■□□□□ 0.74
DDX55-207ENST00000540763 ECHDC3Q96DC8 303 aa19.65■□□□□ 0.74
DDX55-207ENST00000540763 PREBQ9HCU5 417 aa19.65■□□□□ 0.74
DDX55-207ENST00000540763 SCUBE2Q9NQ36 999 aa19.65■□□□□ 0.74
DDX55-207ENST00000540763 PCDHGA5Q9Y5G8 931 aa19.65■□□□□ 0.74
DDX55-207ENST00000540763 RALGAPA1Q6GYQ0 2036 aa19.64■□□□□ 0.74
DDX55-207ENST00000540763 OTOGLQ3ZCN5 2332 aa19.64■□□□□ 0.74
DDX55-207ENST00000540763 KCNK1O00180 336 aa19.64■□□□□ 0.73
DDX55-207ENST00000540763 RNF103O00237 685 aa19.64■□□□□ 0.73
DDX55-207ENST00000540763 INSIG1O15503 277 aa19.64■□□□□ 0.73
DDX55-207ENST00000540763 AP1G1O43747 822 aa19.64■□□□□ 0.73
DDX55-207ENST00000540763 EPN2O95208 641 aa19.64■□□□□ 0.73
DDX55-207ENST00000540763 HLA-DQB2P05538 268 aa19.64■□□□□ 0.73
DDX55-207ENST00000540763 ADRB3P13945 408 aa19.64■□□□□ 0.73
DDX55-207ENST00000540763 GKP32189 559 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms