RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 RALGDSQ12967 914 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 TRIM25Q14258 630 aaKnown RBP4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 LASP1Q14847 261 aaKnown RBP4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 RRS1Q15050 365 aaKnown RBP4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 TESK1Q15569 626 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 SLC10A6Q3KNW5 377 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 ZCWPW2Q504Y3 356 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 CMPK2Q5EBM0 449 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 C1orf141Q5JVX7 400 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 DGKKQ5KSL6 1271 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 THEM4Q5T1C6 240 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 CES4AQ5XG92 561 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 BTBD8Q5XKL5 378 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 E4F1Q66K89 784 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 IGFL4Q6B9Z1 124 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 PTRHD1Q6GMV3 140 aaKnown RBP4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 DCLRE1AQ6PJP8 1040 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 DEGS2Q6QHC5 323 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 CRELD2Q6UXH1 353 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 ZNF365Q70YC5 407 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 UTS2BQ765I0 119 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 PIWIL3Q7Z3Z3 882 aaKnown RBP4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 YTHDF3Q7Z739 585 aaKnown RBP4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 ZNF227Q86WZ6 799 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 PROSER1Q86XN7 944 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 PALB2Q86YC2 1186 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 CDKL3Q8IVW4 592 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 PM20D2Q8IYS1 436 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 TCAIMQ8N3R3 496 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 HDDC3Q8N4P3 179 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 CPA6Q8N4T0 437 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 CELF5Q8N6W0 485 aaKnown RBP4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 PLD5Q8N7P1 536 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 NUDT10Q8NFP7 164 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 ZNF671Q8TAW3 534 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 URGCPQ8TCY9 931 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 BTN2A2Q8WVV5 523 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 NSUN4Q96CB9 384 aaKnown RBP4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 SPACA9Q96E40 222 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 EDC3Q96F86 508 aaKnown RBP4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 NUDT11Q96G61 164 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 TMEM169Q96HH4 297 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 PIWIL1Q96J94 861 aaKnown RBP4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 FAM71F1Q96KD3 344 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 ZSCAN31Q96LW9 406 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 BBS4Q96RK4 519 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 RIT2Q99578 217 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 SLC29A1Q99808 456 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 TRIM15Q9C019 465 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 TMEM206Q9H813 350 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 JMJD4Q9H9V9 463 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 ZMAT3Q9HA38 289 aaKnown RBP4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 KLC4Q9NSK0 619 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 DDX28Q9NUL7 540 aaKnown RBP4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 HAUS2Q9NVX0 235 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 RMND1Q9NWS8 449 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 HACD3Q9P035 362 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 CFAP97Q9P2B7 532 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 ATP6V1HQ9UI12 483 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 CYTH4Q9UIA0 394 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 ADAM29Q9UKF5 820 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 AURKCQ9UQB9 309 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 PIN4Q9Y237 131 aaKnown RBP4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 CLDN16Q9Y5I7 305 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 CDC42BPAQ5VT25 1732 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 MROH2AA6NES4 1674 aa4.83□□□□□ -1.64
HMGB3P9-201ENST00000441799 SPATA31A6Q5VVP1 1343 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 SPATA31A3Q5VYP0 1347 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 ARGFXA6NJG6 315 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 A6NNZ2 444 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 E9PBE3 544 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 H7BY64 318 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 UBE2CO00762 179 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 IFIT3O14879 490 aaKnown RBP4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 BET1O15155 118 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 ATP9AO75110 1047 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 GPC4O75487 556 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 MYO1DO94832 1006 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 OTCP00480 354 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 ASS1P00966 412 aaKnown RBP4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 SCG5P05408 212 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 FYNP06241 537 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 ACAA1P09110 424 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 FAM153BP0C7A2 387 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 PRR35P0CG20 571 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 NR2F1P10589 423 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 CYP19A1P11511 503 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 APEHP13798 732 aaKnown RBP4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 IFNAR1P17181 557 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 PDIA3P30101 505 aaKnown RBP4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 LRPAP1P30533 357 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 PPM1AP35813 382 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 RGS2P41220 211 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 SLC1A1P43005 524 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 ZNF143P52747 638 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 ARL4CP56559 192 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 RAC3P60763 192 aa4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 RPP30P78346 268 aaKnown RBP4.82□□□□□ -1.64
HMGB3P9-201ENST00000441799 ATP8B2P98198 1209 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms