RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 SERPIND1P05546 499 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 PURAQ00577 322 aaKnown RBP11.65□□□□□ -0.54
PTCH1-208ENST00000430669 NFYCQ13952 458 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 DEFB107AQ8IZN7 70 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 OR4L1Q8NH43 312 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 CEP44Q9C0F1 390 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 PNPLA8Q9NP80 782 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 RAP2CQ9Y3L5 183 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 SCN1AP35498 2009 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 CCDC166P0CW27 439 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 FNDC3BQ53EP0 1204 aaKnown RBP11.65□□□□□ -0.54
PTCH1-208ENST00000430669 FUT10Q6P4F1 479 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 SLC41A1Q8IVJ1 513 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 C8orf4Q9NR00 106 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 RABGEF1Q9UJ41 708 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 PCDHB1Q9Y5F3 818 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 HCAR3P49019 387 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 CDH4P55283 916 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 FNDC5Q8NAU1 212 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 SEMA3CQ99985 751 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 GLOD4Q9HC38 313 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 MSRAQ9UJ68 235 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 PAPPA2Q9BXP8 1791 aa11.65□□□□□ -0.54
PTCH1-208ENST00000430669 LOC100653049A0A140TA62 436 aa11.65□□□□□ -0.55
PTCH1-208ENST00000430669 TSPAN3O60637 253 aa11.65□□□□□ -0.55
PTCH1-208ENST00000430669 KRT34O76011 436 aa11.65□□□□□ -0.55
PTCH1-208ENST00000430669 UNC5CO95185 931 aa11.65□□□□□ -0.55
PTCH1-208ENST00000430669 CLDN10P78369 228 aa11.65□□□□□ -0.55
PTCH1-208ENST00000430669 SGCGQ13326 291 aa11.65□□□□□ -0.55
PTCH1-208ENST00000430669 SLC39A4Q6P5W5 647 aa11.65□□□□□ -0.55
PTCH1-208ENST00000430669 IL1RL2Q9HB29 575 aa11.65□□□□□ -0.55
PTCH1-208ENST00000430669 AGO1Q9UL18 857 aaKnown RBP11.65□□□□□ -0.55
PTCH1-208ENST00000430669 MATN3O15232 486 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 FKBP9O95302 570 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 SLC18A1P54219 525 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 NCALDP61601 193 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 CRHR2Q13324 411 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 TARBP2Q15633 366 aaKnown RBP11.64□□□□□ -0.55
PTCH1-208ENST00000430669 FKBP9P1Q75LS8 142 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 TCAIMQ8N3R3 496 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 CMASQ8NFW8 434 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-208ENST00000430669 CSGALNACT1Q8TDX6 532 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 RMDN2Q96LZ7 410 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 TMEM175Q9BSA9 504 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 SLC25A51Q9H1U9 297 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 MAGEH1Q9H213 219 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 SCHIP1Q9P0W5 487 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-208ENST00000430669 NCKAP1Q9Y2A7 1128 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 IRAK2O43187 625 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 PSMC3P17980 439 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 DRD4P21917 467 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 C16orf87Q6PH81 154 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 CRELD2Q6UXH1 353 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-208ENST00000430669 TFAP2BQ92481 460 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 MED8Q96G25 268 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 SUSD3Q96L08 255 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 SNX15Q9NRS6 342 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 SNTNA6NMZ2 147 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 MYBL2P10244 700 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 FLT3P36888 993 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 GRIA4P48058 902 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 PPIGQ13427 754 aaKnown RBP eCLIP11.64□□□□□ -0.55
PTCH1-208ENST00000430669 MPPE1Q53F39 396 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 VARS2Q5ST30 1063 aaKnown RBP11.64□□□□□ -0.55
PTCH1-208ENST00000430669 CYP4Z1Q86W10 505 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 USP6NLQ92738 828 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 B3GNT5Q9BYG0 378 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 ADNPQ9H2P0 1102 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 SYBUQ9NX95 663 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 DTNAQ9Y4J8 743 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 SOAT1P35610 550 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 IRX1P78414 480 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-208ENST00000430669 DUSP4Q13115 394 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 PEX6Q13608 980 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 CES5AQ6NT32 575 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 NECAB2Q7Z6G3 386 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 CRYBG2Q8N1P7 616 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 HTATIP2Q9BUP3 242 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 UGT2B28Q9BY64 529 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 MIEF1Q9NQG6 463 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-208ENST00000430669 GRM6O15303 877 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 SGTAO43765 313 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 CTNNB1P35222 781 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 ANKS1BQ7Z6G8 1248 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 FAM228AQ86W67 206 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 AGO3Q9H9G7 860 aaKnown RBP11.64□□□□□ -0.55
PTCH1-208ENST00000430669 FMO4P31512 558 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 ARL4DP49703 201 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 TPGS2Q68CL5 300 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 MILR1Q7Z6M3 343 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 ACE2Q9BYF1 805 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-208ENST00000430669 ARHGEF4Q9NR80 690 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 TMEM216Q9P0N5 145 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 TCN1P20061 433 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-208ENST00000430669 SERPINB3P29508 390 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 NEK3P51956 506 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 DAOAP59103 153 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 SLC20A2Q08357 652 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 PDE1CQ14123 709 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms