RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 PSMA2P25787 234 aa18■□□□□ 0.47
HDDC3-201ENST00000330334 GKP32189 559 aa18■□□□□ 0.47
HDDC3-201ENST00000330334 SUOXP51687 545 aa18■□□□□ 0.47
HDDC3-201ENST00000330334 ZNF135P52742 658 aaPredicted RBP18■□□□□ 0.47
HDDC3-201ENST00000330334 SGCGQ13326 291 aa18■□□□□ 0.47
HDDC3-201ENST00000330334 PROX2Q3B8N5 592 aa18■□□□□ 0.47
HDDC3-201ENST00000330334 ERMARDQ5T6L9 678 aa18■□□□□ 0.47
HDDC3-201ENST00000330334 GDPD4Q6W3E5 623 aa18■□□□□ 0.47
HDDC3-201ENST00000330334 KYAT3Q6YP21 454 aaKnown RBP18■□□□□ 0.47
HDDC3-201ENST00000330334 Q6ZSR6 202 aa18■□□□□ 0.47
HDDC3-201ENST00000330334 SLC22A18ASQ8N1D0 253 aa18■□□□□ 0.47
HDDC3-201ENST00000330334 CACTIN-AS1Q8N1I8 211 aa18■□□□□ 0.47
HDDC3-201ENST00000330334 ARFGAP1Q8N6T3 406 aa18■□□□□ 0.47
HDDC3-201ENST00000330334 PDCD7Q8N8D1 485 aaKnown RBP18■□□□□ 0.47
HDDC3-201ENST00000330334 DENND6BQ8NEG7 585 aa18■□□□□ 0.47
HDDC3-201ENST00000330334 OR6K2Q8NGY2 324 aa18■□□□□ 0.47
HDDC3-201ENST00000330334 KLF6Q99612 283 aaPredicted RBP18■□□□□ 0.47
HDDC3-201ENST00000330334 KLC2Q9H0B6 622 aa18■□□□□ 0.47
HDDC3-201ENST00000330334 LRRC19Q9H756 370 aa18■□□□□ 0.47
HDDC3-201ENST00000330334 FZD3Q9NPG1 666 aa18■□□□□ 0.47
HDDC3-201ENST00000330334 GOLGA4Q13439 2230 aaKnown RBP18■□□□□ 0.47
HDDC3-201ENST00000330334 TRPM6Q9BX84 2022 aa17.99■□□□□ 0.47
HDDC3-201ENST00000330334 TP53BP1Q12888 1972 aaPredicted RBP17.99■□□□□ 0.47
HDDC3-201ENST00000330334 IGLON5A6NGN9 336 aa17.99■□□□□ 0.47
HDDC3-201ENST00000330334 TMCO5BA8MYB1 307 aa17.99■□□□□ 0.47
HDDC3-201ENST00000330334 DDX3XO00571 662 aaKnown RBP eCLIP17.99■□□□□ 0.476e-21■■■■□ 21.8
HDDC3-201ENST00000330334 RNF8O76064 485 aa17.99■□□□□ 0.47
HDDC3-201ENST00000330334 IGSF6O95976 241 aa17.99■□□□□ 0.47
HDDC3-201ENST00000330334 UGT2B4P06133 528 aa17.99■□□□□ 0.47
HDDC3-201ENST00000330334 MYBL1P10243 752 aa17.99■□□□□ 0.47
HDDC3-201ENST00000330334 ACP1P24666 158 aa17.99■□□□□ 0.47
HDDC3-201ENST00000330334 ABL2P42684 1182 aa17.99■□□□□ 0.47
HDDC3-201ENST00000330334 RABIFP47224 123 aa17.99■□□□□ 0.47
HDDC3-201ENST00000330334 CLDN2P57739 230 aa17.99■□□□□ 0.47
HDDC3-201ENST00000330334 TPI1P60174 286 aa17.99■□□□□ 0.47
HDDC3-201ENST00000330334 KLHL30Q0D2K2 578 aa17.99■□□□□ 0.47
HDDC3-201ENST00000330334 DNAJC3Q13217 504 aa17.99■□□□□ 0.47
HDDC3-201ENST00000330334 MAPK8IP2Q13387 824 aaPredicted RBP17.99■□□□□ 0.47
HDDC3-201ENST00000330334 GRM3Q14832 879 aa17.99■□□□□ 0.47
HDDC3-201ENST00000330334 ATXN7L2Q5T6C5 722 aaPredicted RBP17.99■□□□□ 0.47
HDDC3-201ENST00000330334 LEKR1Q6ZMV7 388 aa17.99■□□□□ 0.47
HDDC3-201ENST00000330334 ZNF354CQ86Y25 554 aa17.99■□□□□ 0.47
HDDC3-201ENST00000330334 SYN2Q92777 582 aaPredicted RBP17.99■□□□□ 0.47
HDDC3-201ENST00000330334 TRIM11Q96F44 468 aa17.99■□□□□ 0.47
HDDC3-201ENST00000330334 KLHL32Q96NJ5 620 aa17.99■□□□□ 0.47
HDDC3-201ENST00000330334 MYOCQ99972 504 aa17.99■□□□□ 0.47
HDDC3-201ENST00000330334 ISCUQ9H1K1 167 aa17.99■□□□□ 0.47
HDDC3-201ENST00000330334 AP4E1Q9UPM8 1137 aa17.99■□□□□ 0.47
HDDC3-201ENST00000330334 LAMA5O15230 3695 aa17.99■□□□□ 0.47
HDDC3-201ENST00000330334 ACACAQ13085 2346 aa17.98■□□□□ 0.47
HDDC3-201ENST00000330334 SPTY2D1-AS1A0A0U1RR47 76 aa17.98■□□□□ 0.47
HDDC3-201ENST00000330334 POM121BA6NF01 834 aa17.98■□□□□ 0.47
HDDC3-201ENST00000330334 TRABD2BA6NFA1 517 aa17.98■□□□□ 0.47
HDDC3-201ENST00000330334 NEMP2A6NFY4 417 aa17.98■□□□□ 0.47
HDDC3-201ENST00000330334 NEMP1O14524 444 aa17.98■□□□□ 0.47
HDDC3-201ENST00000330334 FPGTO14772 594 aa17.98■□□□□ 0.47
HDDC3-201ENST00000330334 RAD51BO15315 384 aa17.98■□□□□ 0.47
HDDC3-201ENST00000330334 PIAS2O75928 621 aa17.98■□□□□ 0.47
HDDC3-201ENST00000330334 SERPINC1P01008 464 aa17.98■□□□□ 0.47
HDDC3-201ENST00000330334 HNF1BP35680 557 aa17.98■□□□□ 0.47
HDDC3-201ENST00000330334 HCAR3P49019 387 aa17.98■□□□□ 0.47
HDDC3-201ENST00000330334 RHOAP61586 193 aa17.98■□□□□ 0.47
HDDC3-201ENST00000330334 ACAP1Q15027 740 aa17.98■□□□□ 0.47
HDDC3-201ENST00000330334 CYTH1Q15438 398 aa17.98■□□□□ 0.47
HDDC3-201ENST00000330334 E4F1Q66K89 784 aaPredicted RBP17.98■□□□□ 0.47
HDDC3-201ENST00000330334 TTC7BQ86TV6 843 aa17.98■□□□□ 0.47
HDDC3-201ENST00000330334 OR4C6Q8NH72 309 aa17.98■□□□□ 0.47
HDDC3-201ENST00000330334 RFFLQ8WZ73 363 aa17.98■□□□□ 0.47
HDDC3-201ENST00000330334 CALN1Q9BXU9 219 aa17.98■□□□□ 0.47
HDDC3-201ENST00000330334 PDFQ9HBH1 243 aa17.98■□□□□ 0.47
HDDC3-201ENST00000330334 MRPL47Q9HD33 250 aaKnown RBP17.98■□□□□ 0.47
HDDC3-201ENST00000330334 BZW2Q9Y6E2 419 aaKnown RBP17.98■□□□□ 0.47
HDDC3-201ENST00000330334 SCINQ9Y6U3 715 aa17.98■□□□□ 0.47
HDDC3-201ENST00000330334 APC2O95996 2303 aa17.98■□□□□ 0.47
HDDC3-201ENST00000330334 A0A1W2PQJ5 194 aa17.97■□□□□ 0.47
HDDC3-201ENST00000330334 TRIM38O00635 465 aa17.97■□□□□ 0.47
HDDC3-201ENST00000330334 TOR1BO14657 336 aa17.97■□□□□ 0.47
HDDC3-201ENST00000330334 SPINT1O43278 529 aa17.97■□□□□ 0.47
HDDC3-201ENST00000330334 SIGLEC6O43699 453 aa17.97■□□□□ 0.47
HDDC3-201ENST00000330334 PRAMEF11O60813 436 aa17.97■□□□□ 0.47
HDDC3-201ENST00000330334 SDC3O75056 442 aa17.97■□□□□ 0.47
HDDC3-201ENST00000330334 CSF2P04141 144 aa17.97■□□□□ 0.47
HDDC3-201ENST00000330334 PFN3P60673 137 aa17.97■□□□□ 0.47
HDDC3-201ENST00000330334 HNRNPKP61978 463 aaKnown RBP eCLIP17.97■□□□□ 0.47
HDDC3-201ENST00000330334 E2F1Q01094 437 aa17.97■□□□□ 0.47
HDDC3-201ENST00000330334 FZD2Q14332 565 aa17.97■□□□□ 0.47
HDDC3-201ENST00000330334 KLHL40Q2TBA0 621 aa17.97■□□□□ 0.47
HDDC3-201ENST00000330334 HS1BP3Q53T59 392 aa17.97■□□□□ 0.47
HDDC3-201ENST00000330334 CCDC157Q569K6 752 aa17.97■□□□□ 0.47
HDDC3-201ENST00000330334 AFMIDQ63HM1 303 aa17.97■□□□□ 0.47
HDDC3-201ENST00000330334 DNAAF5Q86Y56 855 aa17.97■□□□□ 0.47
HDDC3-201ENST00000330334 CENPTQ96BT3 561 aa17.97■□□□□ 0.47
HDDC3-201ENST00000330334 LHX3Q9UBR4 397 aa17.97■□□□□ 0.47
HDDC3-201ENST00000330334 UBA2Q9UBT2 640 aaPredicted RBP17.97■□□□□ 0.47
HDDC3-201ENST00000330334 CNOT8Q9UFF9 292 aaKnown RBP17.97■□□□□ 0.47
HDDC3-201ENST00000330334 ZFYVE26Q68DK2 2539 aa17.96■□□□□ 0.47
HDDC3-201ENST00000330334 FAM149AA5PLN7 773 aa17.96■□□□□ 0.47
HDDC3-201ENST00000330334 ARHGAP42A6NI28 874 aa17.96■□□□□ 0.47
HDDC3-201ENST00000330334 EEF2KO00418 725 aaKnown RBP17.96■□□□□ 0.47
HDDC3-201ENST00000330334 RIOK3O14730 519 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms