RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 RCOR3Q9P2K3 495 aaPredicted RBP8.55□□□□□ -1.04
MSL3-201ENST00000312196 CNOT1A5YKK6 2376 aaKnown RBP8.55□□□□□ -1.04
MSL3-201ENST00000312196 NEMP2A6NFY4 417 aa8.55□□□□□ -1.04
MSL3-201ENST00000312196 ARHGAP42A6NI28 874 aa8.55□□□□□ -1.04
MSL3-201ENST00000312196 C16orf96A6NNT2 1141 aa8.55□□□□□ -1.04
MSL3-201ENST00000312196 RASA4BC9J798 803 aa8.55□□□□□ -1.04
MSL3-201ENST00000312196 FPGTO14772 594 aa8.55□□□□□ -1.04
MSL3-201ENST00000312196 RASA4O43374 803 aa8.55□□□□□ -1.04
MSL3-201ENST00000312196 PIAS2O75928 621 aa8.55□□□□□ -1.04
MSL3-201ENST00000312196 CSF2P04141 144 aa8.55□□□□□ -1.04
MSL3-201ENST00000312196 THEGLP0DJG4 465 aa8.55□□□□□ -1.04
MSL3-201ENST00000312196 NME1P15531 152 aaKnown RBP8.55□□□□□ -1.04
MSL3-201ENST00000312196 PBX1P40424 430 aa8.55□□□□□ -1.04
MSL3-201ENST00000312196 ERVPABLB-1P60509 514 aa8.55□□□□□ -1.04
MSL3-201ENST00000312196 CYP4F3Q08477 520 aa8.55□□□□□ -1.04
MSL3-201ENST00000312196 MAMLD1Q13495 774 aa8.55□□□□□ -1.04
MSL3-201ENST00000312196 NR1I3Q14994 352 aa8.55□□□□□ -1.04
MSL3-201ENST00000312196 CLPPQ16740 277 aaPredicted RBP8.55□□□□□ -1.04
MSL3-201ENST00000312196 PARS2Q7L3T8 475 aaKnown RBP8.55□□□□□ -1.04
MSL3-201ENST00000312196 DNAAF5Q86Y56 855 aa8.55□□□□□ -1.04
MSL3-201ENST00000312196 CCDC185Q8N715 623 aa8.55□□□□□ -1.04
MSL3-201ENST00000312196 EMC1Q8N766 993 aa8.55□□□□□ -1.04
MSL3-201ENST00000312196 FGF11Q92914 225 aa8.55□□□□□ -1.04
MSL3-201ENST00000312196 KLF6Q99612 283 aaPredicted RBP8.55□□□□□ -1.04
MSL3-201ENST00000312196 SPON2Q9BUD6 331 aa8.55□□□□□ -1.04
MSL3-201ENST00000312196 KLC2Q9H0B6 622 aa8.55□□□□□ -1.04
MSL3-201ENST00000312196 LHX3Q9UBR4 397 aa8.55□□□□□ -1.04
MSL3-201ENST00000312196 SPTY2D1-AS1A0A0U1RR47 76 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 K7ERQ8 282 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 CBX4O00257 560 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 KPNA3O00505 521 aaPredicted RBP8.54□□□□□ -1.04
MSL3-201ENST00000312196 SCAMP1O15126 338 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 SRGAP2O75044 1071 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 RRM1P23921 792 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 ACVRL1P37023 503 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 TPM4P67936 248 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 ATP11AP98196 1134 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 IL10RBQ08334 325 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 IQCB1Q15051 598 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 CYTH1Q15438 398 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 C15orf59Q2T9L4 293 aaPredicted RBP8.54□□□□□ -1.04
MSL3-201ENST00000312196 TBC1D25Q3MII6 688 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 BOLA3Q53S33 107 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 ERMARDQ5T6L9 678 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 BRAT1Q6PJG6 821 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 TFAP2DQ7Z6R9 452 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 FSTL5Q8N475 847 aaPredicted RBP8.54□□□□□ -1.04
MSL3-201ENST00000312196 MDM1Q8TC05 714 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 CENPTQ96BT3 561 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 BMFQ96LC9 184 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 PCMTD1Q96MG8 357 aaPredicted RBP8.54□□□□□ -1.04
MSL3-201ENST00000312196 ZNF487B1APH4 448 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 FAM72CH0Y354 149 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 ERVH48-1M5A8F1 160 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 SPINT1O43278 529 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 GIMD1P0DJR0 217 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 JUPP14923 745 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 TIMP2P16035 220 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 CES1P23141 567 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 METAP1P53582 386 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 FAM72AQ5TYM5 149 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 FAM72DQ6L9T8 149 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 C19orf48Q6RUI8 117 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 TMC6Q7Z403 805 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 NLRP8Q86W28 1048 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 FAM72BQ86X60 149 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 OR6C4Q8NGE1 309 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 GLMNQ92990 594 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 ECHDC3Q96DC8 303 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 ERLEC1Q96DZ1 483 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 B3GNT4Q9C0J1 378 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 AMACRQ9UHK6 382 aa8.54□□□□□ -1.04
MSL3-201ENST00000312196 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.53□□□□□ -1.04
MSL3-201ENST00000312196 TMCC1O94876 653 aa8.53□□□□□ -1.04
MSL3-201ENST00000312196 GLDCP23378 1020 aa8.53□□□□□ -1.04
MSL3-201ENST00000312196 DGKAP23743 735 aa8.53□□□□□ -1.04
MSL3-201ENST00000312196 NFKBIAP25963 317 aa8.53□□□□□ -1.04
MSL3-201ENST00000312196 HNRNPH3P31942 346 aaKnown RBP8.53□□□□□ -1.04
MSL3-201ENST00000312196 ABL2P42684 1182 aa8.53□□□□□ -1.04
MSL3-201ENST00000312196 KIAA1024LP59773 190 aa8.53□□□□□ -1.04
MSL3-201ENST00000312196 AP1S1P61966 158 aa8.53□□□□□ -1.04
MSL3-201ENST00000312196 SGCGQ13326 291 aa8.53□□□□□ -1.04
MSL3-201ENST00000312196 FZD2Q14332 565 aa8.53□□□□□ -1.04
MSL3-201ENST00000312196 HS1BP3Q53T59 392 aa8.53□□□□□ -1.04
MSL3-201ENST00000312196 DCUN1D2Q6PH85 259 aa8.53□□□□□ -1.04
MSL3-201ENST00000312196 MACC1Q6ZN28 852 aa8.53□□□□□ -1.04
MSL3-201ENST00000312196 PARGQ86W56 976 aa8.53□□□□□ -1.04
MSL3-201ENST00000312196 VSIG1Q86XK7 387 aa8.53□□□□□ -1.04
MSL3-201ENST00000312196 CACUL1Q86Y37 369 aa8.53□□□□□ -1.04
MSL3-201ENST00000312196 AOPEPQ8N6M6 819 aa8.53□□□□□ -1.04
MSL3-201ENST00000312196 PNPLA1Q8N8W4 532 aa8.53□□□□□ -1.04
MSL3-201ENST00000312196 CCDC97Q96F63 343 aaPredicted RBP8.53□□□□□ -1.04
MSL3-201ENST00000312196 TMPRSS4Q9NRS4 437 aa8.53□□□□□ -1.04
MSL3-201ENST00000312196 SPASTQ9UBP0 616 aa8.53□□□□□ -1.04
MSL3-201ENST00000312196 UBA2Q9UBT2 640 aaPredicted RBP8.53□□□□□ -1.04
MSL3-201ENST00000312196 NENFQ9UMX5 172 aa8.53□□□□□ -1.04
MSL3-201ENST00000312196 TMX2-CTNND1H3BSU7 103 aa8.53□□□□□ -1.04
MSL3-201ENST00000312196 TNFRSF10CO14798 259 aa8.53□□□□□ -1.04
MSL3-201ENST00000312196 BUB1O43683 1085 aa8.53□□□□□ -1.04
MSL3-201ENST00000312196 RNF8O76064 485 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms