RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 FCGRTP55899 365 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 MZT2AQ6P582 158 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 PAGE2Q7Z2X7 111 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 RALGPS2Q86X27 583 aaPredicted RBP16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 ELOA2Q8IYF1 753 aaPredicted RBP16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 DAW1Q8N136 415 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 GMCL1Q96IK5 515 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 TRNAU1APQ9NX07 287 aaKnown RBP16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 UBA2Q9UBT2 640 aaPredicted RBP16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 GPSM3Q9Y4H4 160 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 ATF4P18848 351 aaPredicted RBP16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 CCNA2P20248 432 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 ZNF613Q6PF04 617 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 FAM131AQ6UXB0 335 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 RPTNQ6XPR3 784 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 PLEKHH3Q7Z736 793 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 ALG2Q9H553 416 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 ASB8Q9H765 288 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 ZNF224Q9NZL3 707 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 RSL24D1Q9UHA3 163 aaKnown RBP16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 PCDHB5Q9Y5E4 795 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 UNC5CO95185 931 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 CCDC115Q96NT0 180 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 ACAT2Q9BWD1 397 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 FAM126AQ9BYI3 521 aaPredicted RBP16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 CNOT6Q9ULM6 557 aaKnown RBP16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 SLC26A3P40879 764 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 SLC12A3P55017 1021 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 PSMD4P55036 377 aaKnown RBP16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 CNTN2Q02246 1040 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 CAMK1DQ8IU85 385 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 ANKRD13AQ8IZ07 590 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 LENG1Q96BZ8 264 aaPredicted RBP16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 SMARCD1Q96GM5 515 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 SAR1AQ9NR31 198 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 POLR3HQ9Y535 204 aaPredicted RBP16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 AP4B1Q9Y6B7 739 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 SMIM22K7EJ46 135 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 LTA4HP09960 611 aaKnown RBP16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 ADSSP30520 456 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 PPP3CAQ08209 521 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 FIGNQ5HY92 759 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 CMC1Q7Z7K0 106 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 C12orf56Q8IXR9 622 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 SOHLH2Q9NX45 425 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 ABHD14A-ACY1A0A1B0GW23 586 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 CHRM5P08912 532 aaPredicted RBP16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 MTTPP55157 894 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 BACE1P56817 501 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 CXorf57Q6NSI4 855 aaKnown RBP16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 KAT2AQ92830 837 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 ERAL1O75616 437 aaKnown RBP16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 HIST1H2ABP04908 130 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 GJB1P08034 283 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 TNFSF9P41273 254 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 IRF8Q02556 426 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 CPSF6Q16630 551 aaKnown RBP eCLIP16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 FAM187BQ17R55 369 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 FAM182AQ5T1J6 154 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 HIST3H2AQ7L7L0 130 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 PIWIL2Q8TC59 973 aaKnown RBP16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 HIST1H2ACQ93077 130 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 AAASQ9NRG9 546 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 STARD13Q9Y3M8 1113 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 SAMHD1Q9Y3Z3 626 aaKnown RBP16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 CD3EAPO15446 510 aaKnown RBP16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 RECQL5O94762 991 aaPredicted RBP16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 CDH3P22223 829 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 RARRES1P49788 294 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 MAPKAPK3Q16644 382 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 ARMC12Q5T9G4 340 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 NEPROQ6NW34 567 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 COLGALT2Q8IYK4 626 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 LGMNQ99538 433 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 LRMDAQ9H2I8 198 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 MTIF3Q9H2K0 278 aaKnown RBP16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 KLF15Q9UIH9 416 aa16.93■□□□□ 0.3
TSPAN3-201ENST00000267970 OMPP47874 163 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 DENND5AQ6IQ26 1287 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 SLCO6A1Q86UG4 719 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 DENND1CQ8IV53 801 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 LNX1Q8TBB1 728 aaPredicted RBP16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 GAL3ST1Q99999 423 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 EQTNQ9NQ60 294 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 ARL8BQ9NVJ2 186 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 MTF2Q9Y483 593 aaPredicted RBP16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 KPNA6O60684 536 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 NR2F1P10589 423 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 RPL22P35268 128 aaKnown RBP16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 TRIM28Q13263 835 aaKnown RBP16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 MAMLD1Q13495 774 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 SPPL2CQ8IUH8 684 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 ATL1Q8WXF7 558 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 WDR55Q9H6Y2 383 aaPredicted RBP16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 SPAG4Q9NPE6 437 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 OR12D3Q9UGF7 316 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 SLC27A5Q9Y2P5 690 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 SF3B1O75533 1304 aaKnown RBP eCLIP16.92■□□□□ 0.31e-6■■■■■ 66.8
TSPAN3-201ENST00000267970 A0A075B6Q4 140 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 FFAR2O15552 330 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms