RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 ZNF780BQ9Y6R6 833 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 EME2A4GXA9 379 aaPredicted RBP16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 SNX4O95219 450 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 HOXA7P31268 230 aaPredicted RBP16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 FDFT1P37268 417 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 LRRC73Q5JTD7 316 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 LIN54Q6MZP7 749 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 JAZF1Q86VZ6 243 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 OR10H5Q8NGA6 315 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 OSCP1Q8WVF1 389 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 JMJD4Q9H9V9 463 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 NCDNQ9UBB6 729 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 KCNK1O00180 336 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 ULK1O75385 1050 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 DDNO94850 711 aaPredicted RBP16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 TLX1P31314 330 aaPredicted RBP16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 SLC7A2P52569 658 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 CLCA4Q14CN2 919 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 ZNF470Q6ECI4 717 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 NPNTQ6UXI9 565 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 PSMA8Q8TAA3 256 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 ALG9Q9H6U8 611 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 FBXO6Q9NRD1 293 aaPredicted RBP16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 MBD2Q9UBB5 411 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 TUBGCP4Q9UGJ1 667 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 ATP7BP35670 1465 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 IGSF9BQ9UPX0 1349 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 ARHGEF33A8MVX0 844 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 FDPSP14324 419 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 MAXP61244 160 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 KRR1Q13601 381 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 STILQ15468 1287 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 SF1Q15637 639 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 FAM126BQ8IXS8 530 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 CITED4Q96RK1 184 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 ADAM7Q9H2U9 754 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 ELOVL2Q9NXB9 296 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 XPR1Q9UBH6 696 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 GIT1Q9Y2X7 761 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 MRPS23Q9Y3D9 190 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 BIVM-ERCC5R4GMW8 1640 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 ADM5C9JUS6 153 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 CLPTM1O96005 669 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 MYL6P60660 151 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 PPATQ06203 517 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 USP4Q13107 963 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 IL18R1Q13478 541 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 CERCAMQ5T4B2 595 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 MARC1Q5VT66 337 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 NAIF1Q69YI7 327 aaPredicted RBP16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 IGDCC4Q8TDY8 1250 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 GDPD5Q8WTR4 605 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 CNDP2Q96KP4 475 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 EVA1BQ9NVM1 165 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 PRR36Q9H6K5 1346 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 ZFYVE16Q7Z3T8 1539 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 OR10H3O60404 316 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 SCN1BQ07699 218 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 FBXO48Q5FWF7 155 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 METTL7BQ6UX53 244 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 ZCCHC7Q8N3Z6 543 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 BOLLQ8N9W6 283 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 DTNBP1Q96EV8 351 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 HEPHQ9BQS7 1158 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 WRAP53Q9BUR4 548 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 ZNF609O15014 1411 aa16.53■□□□□ 0.24
CACNA1A-238ENST00000637276 RIPK2O43353 540 aa16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 NT5EP21589 574 aa16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 RNF144AP50876 292 aaPredicted RBP16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 MPP2Q14168 576 aa16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 SUGP1Q8IWZ8 645 aaKnown RBP16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 RASGEF1AQ8N9B8 481 aa16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 MAGEB18Q96M61 343 aa16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 TBL1YQ9BQ87 522 aa16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 LDAHQ9H6V9 325 aa16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 PMF1-BGLAPU3KQ54 211 aa16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 H3BMM5 538 aa16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 TSPAN4O14817 238 aa16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 CCNDBP1O95273 360 aa16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 PDIA5Q14554 519 aa16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 UBXN2BQ14CS0 331 aa16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 MED22Q15528 200 aa16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 N4BP2L1Q5TBK1 243 aaPredicted RBP16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 RAB11FIP2Q7L804 512 aa16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 VPS33AQ96AX1 596 aa16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 EPS8L2Q9H6S3 715 aa16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 CCDC177Q9NQR7 707 aaPredicted RBP16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 CLIC5Q9NZA1 410 aa16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 NDUFAF1Q9Y375 327 aa16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 EFNA1P20827 205 aaPredicted RBP16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 RBM39Q14498 530 aaKnown RBP16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 SMARCD3Q6STE5 483 aa16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 CHRDL2Q6WN34 429 aa16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 KCNMB4Q86W47 210 aa16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 C1orf50Q9BV19 199 aa16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 OAS3Q9Y6K5 1087 aaKnown RBP16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 ADAMTS12P58397 1594 aa16.52■□□□□ 0.24
CACNA1A-238ENST00000637276 LGR5O75473 907 aa16.52■□□□□ 0.23
CACNA1A-238ENST00000637276 CYP2A6P11509 494 aaPredicted RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms