RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 PSMB4P28070 264 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 IFI35P80217 286 aaPredicted RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 ATP1A4Q13733 1029 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 SLC15A2Q16348 729 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 PSMD5Q16401 504 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 STXBP5Q5T5C0 1151 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 TTC23Q5W5X9 447 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 C15orf52Q6ZUT6 534 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 FAM183BPQ6ZVS7 135 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 C1orf186Q6ZWK4 172 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 DHDDSQ86SQ9 333 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 ADAMTSL2Q86TH1 951 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 TSPAN14Q8NG11 270 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 CERS2Q96G23 380 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 WDR12Q9GZL7 423 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 PIF1Q9H611 641 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 PSME2Q9UL46 239 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 TDRKHQ9Y2W6 561 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 C2CD2Q9Y426 696 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 A0A0B4J269 797 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 TSC22D2O75157 780 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 UNC5CO95185 931 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 ANXA5P08758 320 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 ALOX12P18054 663 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 GABRB2P47870 512 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 CLK3P49761 638 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 ATP6V0D1P61421 351 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 GTF2BQ00403 316 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 TAF13Q15543 124 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 TTMPQ5BVD1 217 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 CELF3Q5SZQ8 465 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 ANXA8L1Q5VT79 327 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 NEPROQ6NW34 567 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 ZNF621Q6ZSS3 439 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 HELQQ8TDG4 1101 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 PPP1R14AQ96A00 147 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 MYLPFQ96A32 169 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 HSFY1Q96LI6 401 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 MRIQ9BWK5 157 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 OXCT2Q9BYC2 517 aaPredicted RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 PRDM8Q9NQV8 689 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 SETD4Q9NVD3 440 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 ZMYM5Q9UJ78 669 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 POLR1DQ9Y2S0 133 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 LRRC10BA6NIK2 292 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 PDHXO00330 501 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 FGRP09769 529 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 SSTR1P30872 391 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 NR1H2P55055 460 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 ACSM2AQ08AH3 577 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 PFKFB4Q16877 469 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 SLC39A12Q504Y0 691 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 PPM1LQ5SGD2 360 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 OTUD3Q5T2D3 398 aaPredicted RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 ACSM2BQ68CK6 577 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 OR7A2PQ8NGA2 310 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 EPS8L1Q8TE68 723 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 DNAJB3Q8WWF6 145 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 FAM163AQ96GL9 167 aaPredicted RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 RTKNQ9BST9 563 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 CIPCQ9C0C6 399 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.61□□□□□ -1.671e-6■■■■■ 28.4
CHD9-221ENST00000615216 CCDC167Q9P0B6 97 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 LAMB4A4D0S4 1761 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 E5RJQ4 531 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 TRIM38O00635 465 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 DNAJA2O60884 412 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 ERN1O75460 977 aaKnown RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 OTCP00480 354 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 ADORA2AP29274 412 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 RPL22P35268 128 aaKnown RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 ACLYP53396 1101 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 ADARP55265 1226 aaKnown RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 MRPS6P82932 125 aaKnown RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 RGS21Q2M5E4 152 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 FAM92BQ6ZTR7 304 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 C3orf67Q6ZVT6 689 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 COMMD2Q86X83 199 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 SLC41A1Q8IVJ1 513 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 DEFB106AQ8N104 65 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 HJURPQ8NCD3 748 aaPredicted RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 MKL1Q969V6 931 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 FAM136AQ96C01 138 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 ITCHQ96J02 903 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 KIFC1Q9BW19 673 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 SPATA2Q9UM82 520 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 LOXHD1Q8IVV2 1947 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 NFAT5O94916 1531 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 ASTN1O14525 1302 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 PIGNO95427 931 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 CATP04040 527 aaKnown RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 PROCP04070 461 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 ASGR1P07306 291 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 FGFR1P11362 822 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 TPP2P29144 1249 aaPredicted RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 PSMD4P55036 377 aaKnown RBP4.61□□□□□ -1.67
CHD9-221ENST00000615216 COPZ1P61923 177 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 PPATQ06203 517 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 TCEAL5Q5H9L2 206 aa4.61□□□□□ -1.67
CHD9-221ENST00000615216 GALNT18Q6P9A2 607 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms