RNA–Protein interactions for RNA: ENST00000581497.1

SRSF1-203, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-203ENST00000581497 ACACBO00763 2458 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 SYNJ2BP-COX16A0A087WUM0 186 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 A0A1B0GVM2 712 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 A0A1B0GVT2 93 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 TMEM8BA6NDV4 472 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 TCAF2A6NFQ2 919 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 TTC34A8MYJ7 566 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 FOXN3O00409 490 aaPredicted RBP8.05□□□□□ -1.12
SRSF1-203ENST00000581497 PES1O00541 588 aaKnown RBP8.05□□□□□ -1.12
SRSF1-203ENST00000581497 GRAP2O75791 330 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 FSBPO95073 299 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 PDGFRAP16234 1089 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 CD27P26842 260 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 GRIA4P48058 902 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 CSNK1EP49674 416 aaKnown RBP8.05□□□□□ -1.12
SRSF1-203ENST00000581497 PITX1P78337 314 aaPredicted RBP8.05□□□□□ -1.12
SRSF1-203ENST00000581497 SLC6A3Q01959 620 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 RAPGEF1Q13905 1077 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 TAF5Q15542 800 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 CST6Q15828 149 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 SPRED3Q2MJR0 410 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 HLA-BQ31612 363 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 DPCR1Q3MIW9 517 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 CT47A1Q5JQC4 288 aaPredicted RBP8.05□□□□□ -1.12
SRSF1-203ENST00000581497 C9orf64Q5T6V5 341 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 OLFML1Q6UWY5 402 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 FAM183BPQ6ZVS7 135 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 SLC26A9Q7LBE3 791 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 SLC47A2Q86VL8 602 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 ZDHHC17Q8IUH5 632 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 MMAAQ8IVH4 418 aaKnown RBP8.05□□□□□ -1.12
SRSF1-203ENST00000581497 NAXDQ8IW45 347 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 FAM71AQ8IYT1 594 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 CCAR2Q8N163 923 aaKnown RBP8.05□□□□□ -1.12
SRSF1-203ENST00000581497 TMEM35BQ8NCS4 154 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 C1orf131Q8NDD1 294 aaKnown RBP8.05□□□□□ -1.12
SRSF1-203ENST00000581497 ZNF397Q8NF99 534 aaPredicted RBP8.05□□□□□ -1.12
SRSF1-203ENST00000581497 BIRC7Q96CA5 298 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 RPRD1AQ96P16 312 aaPredicted RBP8.05□□□□□ -1.12
SRSF1-203ENST00000581497 PRMT1Q99873 361 aaKnown RBP8.05□□□□□ -1.12
SRSF1-203ENST00000581497 OMDQ99983 421 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 NUP62CLQ9H1M0 184 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 PDCL3Q9H2J4 239 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 MTG2Q9H4K7 406 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 TM7SF3Q9NS93 570 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 FBXL12Q9NXK8 326 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 COX16Q9P0S2 106 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 TPX2Q9ULW0 747 aaKnown RBP8.05□□□□□ -1.12
SRSF1-203ENST00000581497 NEUROG3Q9Y4Z2 214 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 PCDHGB2Q9Y5G2 931 aa8.05□□□□□ -1.12
SRSF1-203ENST00000581497 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.04□□□□□ -1.12
SRSF1-203ENST00000581497 A0A1W2PP55 124 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 FAM47DPA6NHR8 397 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 LRRC72A6NJI9 287 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 M0QYT0 321 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 MID1O15344 667 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 FLRT2O43155 660 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 CLDN11O75508 207 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 DAB1O75553 588 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 RNASEH2AO75792 299 aaKnown RBP8.04□□□□□ -1.12
SRSF1-203ENST00000581497 TOP3BO95985 862 aaKnown RBP8.04□□□□□ -1.12
SRSF1-203ENST00000581497 ERBB2P04626 1255 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 C1QTNF9P0C862 333 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 C5AR1P21730 350 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 SLC8A1P32418 973 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 PLK1P53350 603 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 RACK1P63244 317 aaKnown RBP8.04□□□□□ -1.12
SRSF1-203ENST00000581497 FAM193AP78312 1265 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 BNC1Q01954 994 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 NME3Q13232 169 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 ZNF177Q13360 481 aaPredicted RBP8.04□□□□□ -1.12
SRSF1-203ENST00000581497 AUHQ13825 339 aaKnown RBP8.04□□□□□ -1.12
SRSF1-203ENST00000581497 KCNJ12Q14500 433 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 DRAP1Q14919 205 aaPredicted RBP8.04□□□□□ -1.12
SRSF1-203ENST00000581497 PTPN20Q4JDL3 420 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 MIIPQ5JXC2 388 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 ACBD5Q5T8D3 534 aaPredicted RBP8.04□□□□□ -1.12
SRSF1-203ENST00000581497 KLHDC7AQ5VTJ3 777 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 KIAA0895LQ68EN5 471 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 FBXL22Q6P050 247 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 SND1Q7KZF4 910 aaKnown RBP eCLIP8.04□□□□□ -1.12
SRSF1-203ENST00000581497 ADAT2Q7Z6V5 191 aaKnown RBP8.04□□□□□ -1.12
SRSF1-203ENST00000581497 DSG4Q86SJ6 1040 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 APCDD1Q8J025 514 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 STK40Q8N2I9 435 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 FAM181AQ8N9Y4 354 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 MSANTD4Q8NCY6 345 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 LRRN4CLQ8ND94 238 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 OR2T34Q8NGX1 318 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 SETD7Q8WTS6 366 aaKnown RBP8.04□□□□□ -1.12
SRSF1-203ENST00000581497 PTPRN2Q92932 1015 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 SKA1Q96BD8 255 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 RPL10LQ96L21 214 aaKnown RBP8.04□□□□□ -1.12
SRSF1-203ENST00000581497 CAMK1GQ96NX5 476 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 FAM129BQ96TA1 746 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 NEUROG2Q9H2A3 272 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 WDCPQ9H6R7 721 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 LIN7BQ9HAP6 207 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 IL21RQ9HBE5 538 aa8.04□□□□□ -1.12
SRSF1-203ENST00000581497 TM9SF3Q9HD45 589 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms