RNA–Protein interactions for RNA: ENST00000539128.5

CYB561A3-212, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-212ENST00000539128 SNX19Q92543 992 aa11.33□□□□□ -0.6
CYB561A3-212ENST00000539128 ZNF419Q96HQ0 510 aaPredicted RBP11.33□□□□□ -0.6
CYB561A3-212ENST00000539128 ZNF599Q96NL3 588 aa11.33□□□□□ -0.6
CYB561A3-212ENST00000539128 CINPQ9BW66 212 aaPredicted RBP11.33□□□□□ -0.6
CYB561A3-212ENST00000539128 TM6SF2Q9BZW4 377 aa11.33□□□□□ -0.6
CYB561A3-212ENST00000539128 TSGA10Q9BZW7 698 aa11.33□□□□□ -0.6
CYB561A3-212ENST00000539128 ZDHHC6Q9H6R6 413 aa11.33□□□□□ -0.6
CYB561A3-212ENST00000539128 ALG6Q9Y672 507 aa11.33□□□□□ -0.6
CYB561A3-212ENST00000539128 IGF2RP11717 2491 aa11.33□□□□□ -0.6
CYB561A3-212ENST00000539128 PKD1L2Q7Z442 2459 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 TBC1D3DA0A087WVF3 549 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 TBC1D3IA0A087WXS9 549 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 TBC1D3EA0A087X179 549 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 TBC1D3KA0A087X1G2 549 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 TBC1D3FA6NER0 549 aaPredicted RBP11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 METTL12A8MUP2 240 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 TBC1D3LB9A6J9 549 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 LEFTY1O75610 366 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 FSBPO95073 299 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 ZRANB2O95218 330 aaKnown RBP eCLIP11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 TBC1D3HP0C7X1 549 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 ZNF806P0C7X5 589 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 KDELR1P24390 212 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 NUDT1P36639 197 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 HSPA9P38646 679 aaKnown RBP11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 PTGER3P43115 390 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 MAPK8P45983 427 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 ARSEP51690 589 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 TFDP2Q14188 446 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 ZNF235Q14590 738 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 DUOXA1Q1HG43 343 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 ATP13A4Q4VNC1 1196 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 ARSIQ5FYB1 569 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 TBC1D3GQ6DHY5 549 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 TBC1D3CQ6IPX1 549 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 FBXL19Q6PCT2 694 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 ARHGAP12Q8IWW6 846 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 RCOR2Q8IZ40 523 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 TBC1D3Q8IZP1 549 aaPredicted RBP11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 DEFB119Q8N690 84 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 ACRBPQ8NEB7 543 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 TPCN2Q8NHX9 752 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 UBE2Q2Q8WVN8 375 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 TSC1Q92574 1164 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 SKA1Q96BD8 255 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 NUSAP1Q9BXS6 441 aaKnown RBP11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 NEUROG2Q9H2A3 272 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 KLHL11Q9NVR0 708 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 SEPT3Q9UH03 358 aa11.32□□□□□ -0.6
CYB561A3-212ENST00000539128 RALGAPA1Q6GYQ0 2036 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 J3KR12 359 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 NEMP1O14524 444 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 APOL1O14791 398 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 PJA2O43164 708 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 KRT86O43790 486 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 CD160O95971 181 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 CFIP05156 583 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 PROS1P07225 676 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 CD48P09326 243 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 XPAP23025 273 aaPredicted RBP11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 ITPKAP23677 461 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 ITGB7P26010 798 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 ACSL1P33121 698 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 NEK3P51956 506 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 ATXN3P54252 364 aaPredicted RBP11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 CNTN1Q12860 1018 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 MMRN1Q13201 1228 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 LBRQ14739 615 aaKnown RBP11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 PAFAH1B3Q15102 231 aaKnown RBP11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 TEAD4Q15561 434 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 POM121L1PQ3SYA9 428 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 AASDHQ4L235 1098 aaPredicted RBP11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 MARC1Q5VT66 337 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 DCAF12L1Q5VU92 463 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 KIAA0895LQ68EN5 471 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 ERN2Q76MJ5 926 aaKnown RBP11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 PRPF39Q86UA1 669 aaKnown RBP11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 RFX6Q8HWS3 928 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 CCDC50Q8IVM0 306 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 AADATQ8N5Z0 425 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 NPWQ8N729 165 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 CHST14Q8NCH0 376 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 PCDH19Q8TAB3 1148 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 RAPGEF5Q92565 580 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 RAB7BQ96AH8 199 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 FAF2Q96CS3 445 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 RBM41Q96IZ5 413 aaKnown RBP11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 RNF157Q96PX1 679 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 HDAC8Q9BY41 377 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 KLC2Q9H0B6 622 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 MIR1-1HGQ9H1L0 117 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 PDFQ9HBH1 243 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 PREBQ9HCU5 417 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 MFHAS1Q9Y4C4 1052 aa11.31□□□□□ -0.6
CYB561A3-212ENST00000539128 LAMA1P25391 3075 aa11.3□□□□□ -0.6
CYB561A3-212ENST00000539128 A0A1B0GTW7 788 aa11.3□□□□□ -0.6
CYB561A3-212ENST00000539128 MACROD2A1Z1Q3 448 aa11.3□□□□□ -0.6
CYB561A3-212ENST00000539128 CCDC66A2RUB6 948 aa11.3□□□□□ -0.6
CYB561A3-212ENST00000539128 BCAT2O15382 392 aaPredicted RBP11.3□□□□□ -0.6
CYB561A3-212ENST00000539128 ZNF821O75541 412 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms