RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 GIMAP4Q9NUV9 329 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 COQ4Q9Y3A0 265 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 HES2Q9Y543 173 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 PSAT1Q9Y617 370 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 BRCA1P38398 1863 aaKnown RBP10.31□□□□□ -0.76
SPIDR-224ENST00000524126 FAM172BPA6NC97 362 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 TRDMT1O14717 391 aaKnown RBP10.31□□□□□ -0.76
SPIDR-224ENST00000524126 SLC16A4O15374 487 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 GH2P01242 217 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 APRTP07741 180 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 MBL2P11226 248 aaPredicted RBP10.31□□□□□ -0.76
SPIDR-224ENST00000524126 ATP6V1B2P21281 511 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 GARTP22102 1010 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 CCND2P30279 289 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 SEPHS1P49903 392 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 LIG4P49917 911 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 SLC26A2P50443 739 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 HLCSP50747 726 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 LSM3P62310 102 aaKnown RBP10.31□□□□□ -0.76
SPIDR-224ENST00000524126 MMRN1Q13201 1228 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 ARHGEF6Q15052 776 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 FAM214AQ32MH5 1076 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 PUS10Q3MIT2 529 aaKnown RBP10.31□□□□□ -0.76
SPIDR-224ENST00000524126 CATSPEREQ5SY80 951 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 NEK5Q6P3R8 708 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 DNAJC24Q6P3W2 148 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 TMEM270Q6UE05 265 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 SLC16A12Q6ZSM3 486 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 OTOP1Q7RTM1 612 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 ERMP1Q7Z2K6 904 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 CMC1Q7Z7K0 106 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 USP37Q86T82 979 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 HACE1Q8IYU2 909 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 PLD6Q8N2A8 252 aaKnown RBP10.31□□□□□ -0.76
SPIDR-224ENST00000524126 TMC2Q8TDI7 906 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 VPS33AQ96AX1 596 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 HDAC11Q96DB2 347 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 TUBA1CQ9BQE3 449 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 WDR18Q9BV38 432 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 SUCOQ9UBS9 1254 aaKnown RBP10.31□□□□□ -0.76
SPIDR-224ENST00000524126 PCSK1NQ9UHG2 260 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 NUDT5Q9UKK9 219 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 OAZ3Q9UMX2 235 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 SPEF1Q9Y4P9 236 aa10.31□□□□□ -0.76
SPIDR-224ENST00000524126 COPG1Q9Y678 874 aaKnown RBP10.31□□□□□ -0.76
SPIDR-224ENST00000524126 ERVH48-1M5A8F1 160 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 EI24O14681 340 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 PAPSS1O43252 624 aaPredicted RBP10.3□□□□□ -0.76
SPIDR-224ENST00000524126 MAN1A2O60476 641 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 BMP2P12643 396 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 GLULP15104 373 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 KDELR1P24390 212 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 HTR1BP28222 390 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 CD40LGP29965 261 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 NOVP48745 357 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 CRADDP78560 199 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 ROR1Q01973 937 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 LRRC38Q5VT99 294 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 PRAMEF18Q5VWM3 479 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 ZCCHC8Q6NZY4 707 aaKnown RBP10.3□□□□□ -0.76
SPIDR-224ENST00000524126 MOXD1Q6UVY6 613 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 DLK2Q6UY11 383 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 OTOP3Q7RTS5 596 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 PHF13Q86YI8 300 aaPredicted RBP10.3□□□□□ -0.76
SPIDR-224ENST00000524126 ARFGAP1Q8N6T3 406 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 PSD4Q8NDX1 1056 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 FKBP10Q96AY3 582 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 ATXN7L3BQ96GX2 97 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 MAP6Q96JE9 813 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 GMLQ99445 158 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 KIFC3Q9BVG8 833 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 TMEM206Q9H813 350 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 TUFT1Q9NNX1 390 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 PLSCR3Q9NRY6 295 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 C1orf112Q9NSG2 853 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 PIH1D1Q9NWS0 290 aaKnown RBP10.3□□□□□ -0.76
SPIDR-224ENST00000524126 SLC9A2Q9UBY0 812 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 DSEQ9UL01 958 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 PCDHB4Q9Y5E5 795 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 SMCHD1A6NHR9 2005 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 FER1L6Q2WGJ9 1857 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 CCNKO75909 580 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 SNAP29O95721 258 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 LTFP02788 710 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 ARNTP27540 789 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 CLCNKBP51801 687 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 STX1BP61266 288 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 VAC14Q08AM6 782 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 FSTL1Q12841 308 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 ZNF773Q6PK81 442 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 TIFABQ6ZNK6 161 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 NEK10Q6ZWH5 1172 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 SPATC1Q76KD6 591 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 SAMD7Q7Z3H4 446 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 CAMK1DQ8IU85 385 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 SCML4Q8N228 414 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 TTC30BQ8N4P2 665 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 SEPT8Q92599 483 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 APBB2Q92870 758 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 PBXIP1Q96AQ6 731 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms