RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 NAA20P61599 178 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 KCNC4Q03721 635 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 FSTL1Q12841 308 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 GRSF1Q12849 480 aaKnown RBP eCLIP17.96■□□□□ 0.47
NUP54-205ENST00000507257 UGP2Q16851 508 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 SOWAHAQ2M3V2 549 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 DCLRE1AQ6PJP8 1040 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 CDR2LQ86X02 465 aaPredicted RBP17.96■□□□□ 0.47
NUP54-205ENST00000507257 AQP12AQ8IXF9 295 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 AFAP1L2Q8N4X5 818 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 PCDH20Q8N6Y1 951 aaKnown RBP17.96■□□□□ 0.47
NUP54-205ENST00000507257 ACVR1CQ8NER5 493 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 OR2T34Q8NGX1 318 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 OR2T3Q8NH03 318 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 TBC1D15Q8TC07 691 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 SPPL2BQ8TCT7 592 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 DQX1Q8TE96 717 aaKnown RBP17.96■□□□□ 0.47
NUP54-205ENST00000507257 ROPN1LQ96C74 230 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 GPR78Q96P69 363 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 TUBA1CQ9BQE3 449 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 NPLQ9BXD5 320 aaPredicted RBP17.96■□□□□ 0.47
NUP54-205ENST00000507257 ADAMTS10Q9H324 1103 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 RPF2Q9H7B2 306 aaKnown RBP17.96■□□□□ 0.47
NUP54-205ENST00000507257 MEAF6Q9HAF1 191 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 SLC38A7Q9NVC3 462 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 PLXNA1Q9UIW2 1896 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 C19orf81C9J6K1 198 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 DLGAP1O14490 977 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 NCAM2O15394 837 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 MTSS1O43312 755 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 SERPINB7O75635 380 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 SNRPB2P08579 225 aaKnown RBP17.96■□□□□ 0.47
NUP54-205ENST00000507257 PTPN3P26045 913 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 MATKP42679 507 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 CDH15P55291 814 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 MPP1Q00013 466 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 BST2Q10589 180 aaKnown RBP17.96■□□□□ 0.47
NUP54-205ENST00000507257 TGFBIQ15582 683 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 MOGQ16653 247 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 DGKDQ16760 1214 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 SLC25A52Q3SY17 297 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 TTC33Q6PID6 262 aaPredicted RBP17.96■□□□□ 0.47
NUP54-205ENST00000507257 CATSPERGQ6ZRH7 1159 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 NCCRP1Q6ZVX7 275 aaPredicted RBP17.96■□□□□ 0.47
NUP54-205ENST00000507257 PDZD4Q76G19 769 aaPredicted RBP17.96■□□□□ 0.47
NUP54-205ENST00000507257 BNIPLQ7Z465 357 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 DHFR2Q86XF0 187 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 ERO1BQ86YB8 467 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 CNTN4Q8IWV2 1026 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 PYROXD2Q8N2H3 581 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 TMEM130Q8N3G9 435 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 CHPT1Q8WUD6 406 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 THAP11Q96EK4 314 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 MFSD3Q96ES6 412 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 SLC45A3Q96JT2 553 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 SCYL1Q96KG9 808 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 MARK4Q96L34 752 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 MINDY3Q9H8M7 445 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 CXorf21Q9HAI6 301 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 SETD4Q9NVD3 440 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 KLHL8Q9P2G9 620 aaPredicted RBP17.96■□□□□ 0.47
NUP54-205ENST00000507257 GNPTGQ9UJJ9 305 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 CROTQ9UKG9 612 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 ACOT9Q9Y305 439 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 ZNF711Q9Y462 761 aa17.96■□□□□ 0.47
NUP54-205ENST00000507257 H3BMQ9 156 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 BOLA2-SMG1P6H3BVE0 249 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 SOCS2O14508 198 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 DCLK1O15075 740 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 SLC26A2P50443 739 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 PSMD7P51665 324 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 KPNA2P52292 529 aaKnown RBP17.95■□□□□ 0.46
NUP54-205ENST00000507257 SLC5A3P53794 718 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 BCAT1P54687 386 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 GSTM4Q03013 218 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 FASTKQ14296 549 aaKnown RBP17.95■□□□□ 0.46
NUP54-205ENST00000507257 USP10Q14694 798 aaKnown RBP17.95■□□□□ 0.46
NUP54-205ENST00000507257 AMHR2Q16671 573 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 SLC36A3Q495N2 470 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 TSTD2Q5T7W7 516 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 DCDC5Q6ZRR9 648 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 ACOT1Q86TX2 421 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 KLHDC8BQ8IXV7 354 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 CCNYQ8ND76 341 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 DDHD1Q8NEL9 900 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 HSFY1Q96LI6 401 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 COG8Q96MW5 612 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 ADI1Q9BV57 179 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 TDRD1Q9BXT4 1180 aaKnown RBP17.95■□□□□ 0.46
NUP54-205ENST00000507257 TRIM15Q9C019 465 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 GBA3Q9H227 469 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 CCDC68Q9H2F9 335 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 MRPL46Q9H2W6 279 aaKnown RBP17.95■□□□□ 0.46
NUP54-205ENST00000507257 IARS2Q9NSE4 1012 aaKnown RBP17.95■□□□□ 0.46
NUP54-205ENST00000507257 SEPT10Q9P0V9 454 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 XPR1Q9UBH6 696 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 B3GNT3Q9Y2A9 372 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 CITO14578 2027 aa17.95■□□□□ 0.46
NUP54-205ENST00000507257 SRP72O76094 671 aaKnown RBP17.94■□□□□ 0.46
NUP54-205ENST00000507257 ALDH2P05091 517 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms