RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 IL1R2P27930 398 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 MAGEA1P43355 309 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 CCR5P51681 352 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 CCNHP51946 323 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-221ENST00000477561 VAV2P52735 878 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 TAS2R38P59533 333 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 RACK1P63244 317 aaKnown RBP8.42□□□□□ -1.06
HDAC6-221ENST00000477561 IL9RQ01113 521 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 KIF5AQ12840 1032 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 TEAD4Q15561 434 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 SMTNL2Q2TAL5 461 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 ATXN7L2Q5T6C5 722 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-221ENST00000477561 PIP5KL1Q5T9C9 394 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 CYP4V2Q6ZWL3 525 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-221ENST00000477561 PRPF39Q86UA1 669 aaKnown RBP8.42□□□□□ -1.06
HDAC6-221ENST00000477561 REXO1L1PQ8IX06 675 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 PCDH20Q8N6Y1 951 aaKnown RBP8.42□□□□□ -1.06
HDAC6-221ENST00000477561 FNIP1Q8TF40 1166 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 HSPH1Q92598 858 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 FAM131CQ96AQ9 280 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 SERAC1Q96JX3 654 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 PHF12Q96QT6 1004 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 MYOCQ99972 504 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 HEPHQ9BQS7 1158 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 NUP85Q9BW27 656 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 ZDHHC5Q9C0B5 715 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 CEP44Q9C0F1 390 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 SLC39A8Q9C0K1 460 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 SLC32A1Q9H598 525 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 RETREG1Q9H6L5 497 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 DYRK4Q9NR20 520 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 DNAAF2Q9NVR5 837 aaKnown RBP8.42□□□□□ -1.06
HDAC6-221ENST00000477561 ANAPC7Q9UJX3 599 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 CA5BQ9Y2D0 317 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 FNDC3AQ9Y2H6 1198 aaKnown RBP8.42□□□□□ -1.06
HDAC6-221ENST00000477561 MFHAS1Q9Y4C4 1052 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 PCDHA13Q9Y5I0 950 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 WASF2Q9Y6W5 498 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 NYNRINQ9P2P1 1898 aaKnown RBP8.42□□□□□ -1.06
HDAC6-221ENST00000477561 SPTBN2O15020 2390 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 PI4KAP42356 2102 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 SPAARA0A1B0GVQ0 90 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 A0A1W2PQU0 124 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 WASH4PA8MWX3 477 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 H0Y8X5 98 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 J3KR12 359 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 DFFAO00273 331 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 KRIT1O00522 736 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 SLC31A1O15431 190 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 INSIG1O15503 277 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 FGF10O15520 208 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-221ENST00000477561 SLC7A4O43246 635 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 KIF5CO60282 957 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 PCDH8O95206 1070 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 CYP1A2P05177 515 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 CEACAM1P13688 526 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 TNNT1P13805 278 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 PRLRP16471 622 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 ERCC2P18074 760 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 CD38P28907 300 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 SSR1P43307 286 aaKnown RBP8.41□□□□□ -1.06
HDAC6-221ENST00000477561 GRIA4P48058 902 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 PAPOLAP51003 745 aaKnown RBP8.41□□□□□ -1.06
HDAC6-221ENST00000477561 C21orf59P57076 290 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 GEMIN4P57678 1058 aaKnown RBP8.41□□□□□ -1.06
HDAC6-221ENST00000477561 YBEYP58557 167 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-221ENST00000477561 SNRPD1P62314 119 aaKnown RBP8.41□□□□□ -1.06
HDAC6-221ENST00000477561 FAM193AP78312 1265 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 SERINC3Q13530 473 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 CYTH1Q15438 398 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 MYLK3Q32MK0 819 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 PARP15Q460N3 678 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 TXNRD3NBQ6F5E7 133 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 IL27RAQ6UWB1 636 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 RFX8Q6ZV50 586 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 NYAP1Q6ZVC0 841 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 ERN2Q76MJ5 926 aaKnown RBP8.41□□□□□ -1.06
HDAC6-221ENST00000477561 PIP4P1Q86T03 277 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 CPNE8Q86YQ8 564 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 TP53INP2Q8IXH6 220 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 UMODL1-AS1Q8N2C9 162 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 OR2AP1Q8NGE2 309 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 SETD7Q8WTS6 366 aaKnown RBP8.41□□□□□ -1.06
HDAC6-221ENST00000477561 ISG20Q96AZ6 181 aaKnown RBP8.41□□□□□ -1.06
HDAC6-221ENST00000477561 EXOC2Q96KP1 924 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 C16orf45Q96MC5 204 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-221ENST00000477561 PACSIN1Q9BY11 444 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 OSGEPQ9NPF4 335 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 FZD3Q9NPG1 666 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 TM7SF3Q9NS93 570 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 CWC15Q9P013 229 aaKnown RBP8.41□□□□□ -1.06
HDAC6-221ENST00000477561 IP6K2Q9UHH9 426 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 NCOR2Q9Y618 2525 aa8.41□□□□□ -1.06
HDAC6-221ENST00000477561 PLXNA2O75051 1894 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 A0A1W2PR77 199 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 ZSCAN5CA6NGD5 496 aaPredicted RBP8.4□□□□□ -1.06
HDAC6-221ENST00000477561 C16orf96A6NNT2 1141 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 TMEM110-MUSTN1A8MSY1 372 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 C10orf142B7Z368 130 aa8.4□□□□□ -1.06
HDAC6-221ENST00000477561 VILLO15195 856 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms