RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 CD59P13987 128 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 ERCC2P18074 760 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 HCAR3P49019 387 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 CCT8P50990 548 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 BNC1Q01954 994 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 SLC18A3Q16572 532 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 HADHQ16836 314 aaKnown RBP11.39□□□□□ -0.59
RFFL-204ENST00000414419 SMTNL2Q2TAL5 461 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 MYLK3Q32MK0 819 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 KCNT1Q5JUK3 1230 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 PIP5KL1Q5T9C9 394 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 NAPEPLDQ6IQ20 393 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 LAYNQ6UX15 382 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 H2AFVQ71UI9 128 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 LZTR1Q8N653 840 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 OR6K2Q8NGY2 324 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 ZNF564Q8TBZ8 553 aaPredicted RBP11.39□□□□□ -0.59
RFFL-204ENST00000414419 HSPH1Q92598 858 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 CELF6Q96J87 481 aaKnown RBP11.39□□□□□ -0.59
RFFL-204ENST00000414419 FEM1CQ96JP0 617 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 CCDC42Q96M95 316 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 DNAJC7Q99615 494 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 ORAI3Q9BRQ5 295 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 OSBPL1AQ9BXW6 950 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 TRIM5Q9C035 493 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 IL21RQ9HBE5 538 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 A0A1W2PQU0 124 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 SSU72P8A0A1W2PR75 194 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 C16orf96A6NNT2 1141 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 PRAMEF26H0Y7S4 382 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 DFFAO00273 331 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 NEMP1O14524 444 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 KCNK3O14649 394 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 SH3BP5O60239 455 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 UGT2B4P06133 528 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 ADRB3P13945 408 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 CTSKP43235 329 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 PAPOLAP51003 745 aaKnown RBP11.38□□□□□ -0.59
RFFL-204ENST00000414419 ADKP55263 362 aaKnown RBP11.38□□□□□ -0.59
RFFL-204ENST00000414419 TAS2R38P59533 333 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 MAPK8IP2Q13387 824 aaPredicted RBP11.38□□□□□ -0.59
RFFL-204ENST00000414419 KRT81Q14533 505 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 ZNF805Q5CZA5 627 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 ATXN7L2Q5T6C5 722 aaPredicted RBP11.38□□□□□ -0.59
RFFL-204ENST00000414419 GDPD4Q6W3E5 623 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 PIP4P1Q86T03 277 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 HORMAD1Q86X24 394 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 CNGA4Q8IV77 575 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 NAXDQ8IW45 347 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 NIPA2Q8N8Q9 360 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 MFSD2AQ8NA29 543 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 RAB7BQ96AH8 199 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 ARHGEF26Q96DR7 871 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 BTBD6Q96KE9 485 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 KLHL32Q96NJ5 620 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 SLC39A8Q9C0K1 460 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 KLC2Q9H0B6 622 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 LRRC19Q9H756 370 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 SP110Q9HB58 689 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 GDF3Q9NR23 364 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 ABHD10Q9NUJ1 306 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.38□□□□□ -0.59
RFFL-204ENST00000414419 CWC15Q9P013 229 aaKnown RBP11.38□□□□□ -0.59
RFFL-204ENST00000414419 UVRAGQ9P2Y5 699 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 LCMT1Q9UIC8 334 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 FNDC3AQ9Y2H6 1198 aaKnown RBP11.38□□□□□ -0.59
RFFL-204ENST00000414419 PCDHGB2Q9Y5G2 931 aa11.38□□□□□ -0.59
RFFL-204ENST00000414419 AKR1B15C9JRZ8 316 aaPredicted RBP11.37□□□□□ -0.59
RFFL-204ENST00000414419 H0Y8X5 98 aa11.37□□□□□ -0.59
RFFL-204ENST00000414419 J3KR12 359 aa11.37□□□□□ -0.59
RFFL-204ENST00000414419 TLR4O00206 839 aa11.37□□□□□ -0.59
RFFL-204ENST00000414419 RNF103O00237 685 aa11.37□□□□□ -0.59
RFFL-204ENST00000414419 SLC31A1O15431 190 aa11.37□□□□□ -0.59
RFFL-204ENST00000414419 FLRT2O43155 660 aa11.37□□□□□ -0.59
RFFL-204ENST00000414419 PRAMEF11O60813 436 aa11.37□□□□□ -0.59
RFFL-204ENST00000414419 PALMO75781 387 aa11.37□□□□□ -0.59
RFFL-204ENST00000414419 RARAP10276 462 aa11.37□□□□□ -0.59
RFFL-204ENST00000414419 XPAP23025 273 aaPredicted RBP11.37□□□□□ -0.59
RFFL-204ENST00000414419 IL1R2P27930 398 aa11.37□□□□□ -0.59
RFFL-204ENST00000414419 AKT2P31751 481 aa11.37□□□□□ -0.59
RFFL-204ENST00000414419 GKP32189 559 aa11.37□□□□□ -0.59
RFFL-204ENST00000414419 ARRB1P49407 418 aaPredicted RBP11.37□□□□□ -0.59
RFFL-204ENST00000414419 RPS21P63220 83 aaKnown RBP11.37□□□□□ -0.59
RFFL-204ENST00000414419 SIM1P81133 766 aaPredicted RBP11.37□□□□□ -0.59
RFFL-204ENST00000414419 OVGP1Q12889 678 aa11.37□□□□□ -0.59
RFFL-204ENST00000414419 SGCGQ13326 291 aa11.37□□□□□ -0.59
RFFL-204ENST00000414419 GRM3Q14832 879 aa11.37□□□□□ -0.59
RFFL-204ENST00000414419 TRIP6Q15654 476 aaKnown RBP11.37□□□□□ -0.59
RFFL-204ENST00000414419 DPYSL2Q16555 572 aa11.37□□□□□ -0.59
RFFL-204ENST00000414419 INAVAQ3KP66 663 aa11.37□□□□□ -0.59
RFFL-204ENST00000414419 ZFYVE27Q5T4F4 411 aa11.37□□□□□ -0.59
RFFL-204ENST00000414419 CFAP58Q5T655 872 aa11.37□□□□□ -0.59
RFFL-204ENST00000414419 KIAA1161Q6NSJ0 714 aa11.37□□□□□ -0.59
RFFL-204ENST00000414419 TMCO3Q6UWJ1 677 aa11.37□□□□□ -0.59
RFFL-204ENST00000414419 CYP4V2Q6ZWL3 525 aaPredicted RBP11.37□□□□□ -0.59
RFFL-204ENST00000414419 PARS2Q7L3T8 475 aaKnown RBP11.37□□□□□ -0.59
RFFL-204ENST00000414419 TTC7BQ86TV6 843 aa11.37□□□□□ -0.59
RFFL-204ENST00000414419 PAF1Q8N7H5 531 aa11.37□□□□□ -0.59
RFFL-204ENST00000414419 NETO2Q8NC67 525 aa11.37□□□□□ -0.59
RFFL-204ENST00000414419 RHBDD1Q8TEB9 315 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms