RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 CHRNB2P17787 502 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 EPHA3P29320 983 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 ARL4DP49703 201 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 ATP6V0D1P61421 351 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 GBE1Q04446 702 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 CRY1Q16526 586 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 FAM187BQ17R55 369 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 TEX44Q53QW1 395 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 RORBQ92753 470 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 ZFYVE19Q96K21 471 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 NXF3Q9H4D5 531 aaKnown RBP17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 MAN1C1Q9NR34 630 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 ZMYM5Q9UJ78 669 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 ZNF180Q9UJW8 692 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 PEAK1Q9H792 1746 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 PSMB9P28065 219 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 WNT3AP56704 352 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 CMC1Q7Z7K0 106 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 TRIM48Q8IWZ4 208 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 GRHL1Q9NZI5 618 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 CATP04040 527 aaKnown RBP17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 ANXA5P08758 320 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 CCDC159P0C7I6 412 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 PTPN9P43378 593 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 UBAP2LQ14157 1087 aaKnown RBP17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 PTPRNQ16849 979 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 AFTPHQ6ULP2 937 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 PLEKHM3Q6ZWE6 761 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 ZNF467Q7Z7K2 595 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 MON1AQ86VX9 555 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 AADATQ8N5Z0 425 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 MPP4Q96JB8 637 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 C7orf26Q96N11 449 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 XPNPEP1Q9NQW7 623 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 DNMT3LQ9UJW3 386 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 ST3GAL5Q9UNP4 418 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 SF3B1O75533 1304 aaKnown RBP eCLIP17.25■□□□□ 0.356e-6■■■■■ 75.8
TRAPPC11-201ENST00000334690 CARNS1A5YM72 827 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 PEX1O43933 1283 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 COL6A2P12110 1019 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 PRKG2Q13237 762 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 CTBP1Q13363 440 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 BTG3Q14201 252 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 TTC23Q5W5X9 447 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 TTC7BQ86TV6 843 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 ALYREFQ86V81 257 aaKnown RBP17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 ECHDC2Q86YB7 292 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 ADHFE1Q8IWW8 467 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 MTMR14Q8NCE2 650 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 TRPC4APQ8TEL6 797 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 FCRL2Q96LA5 508 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 OMDQ99983 421 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 PALMDQ9NP74 551 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 FAM105AQ9NUU6 356 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 ADPRHL2Q9NX46 363 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 USE1Q9NZ43 259 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 INVSQ9Y283 1065 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 SMIM28A0A1B0GU29 152 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 PRR5-ARHGAP8B1AHC4 643 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 FGF1P05230 155 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 GRIA3P42263 894 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 ATN1P54259 1190 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 ARHGAP8P85298 464 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 TGM3Q08188 693 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 DDR2Q16832 855 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 KCTD19Q17RG1 926 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 DEFB128Q7Z7B8 93 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 CLYBLQ8N0X4 340 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 FAM13CQ8NE31 585 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 KRCC1Q9NPI7 259 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 MRPL42Q9Y6G3 142 aaKnown RBP17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 FAM220BPB1ANY3 271 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 CLDN5O00501 218 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 HS6ST1O60243 411 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 ZMPSTE24O75844 475 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 ALDH1A2O94788 518 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 IMPDH2P12268 514 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 PAX7P23759 505 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 METTL21CQ5VZV1 264 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 DCLRE1AQ6PJP8 1040 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 CCDC103Q8IW40 242 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 TRPM4Q8TD43 1214 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 REPS1Q96D71 796 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 CDH19Q9H159 772 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 CYLDQ9NQC7 956 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 VWA7Q9Y334 891 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 GSC2O15499 205 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 PAPSS1O43252 624 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 PEX11AO75192 247 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 CKBP12277 381 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 GPR15P49685 360 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 CDK18Q07002 472 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 NRF1Q16656 503 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 ADAMTSL2Q86TH1 951 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 ROGDIQ9GZN7 287 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 NMUR2Q9GZQ4 415 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 SEMA6AQ9H2E6 1030 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 GLOD4Q9HC38 313 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 KLHL28Q9NXS3 571 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms