RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 CCNDBP1O95273 360 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 SNRPB2P08579 225 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 NUDT17P0C025 328 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 FMO4P31512 558 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 SPIDRQ14159 915 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 ZDHHC20Q5W0Z9 365 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 AGMOQ6ZNB7 445 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 SYT12Q8IV01 421 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 SYTL1Q8IYJ3 562 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 DMGDHQ9UI17 866 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 ABLIM1O14639 778 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 CABYRO75952 493 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 FGF19O95750 216 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 FTH1P02794 183 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 PPIBP23284 216 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 TLX1P31314 330 aaPredicted RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 SNRPD1P62314 119 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 PPIDQ08752 370 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 PDK4Q16654 411 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 ZNF57Q68EA5 555 aaPredicted RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 FAM117BQ6P1L5 589 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 CCDC149Q6ZUS6 474 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 SNRNP27Q8WVK2 155 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 PRMT6Q96LA8 375 aaPredicted RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 MTMR9Q96QG7 549 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 COQ7Q99807 217 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 C2orf49Q9BVC5 232 aaPredicted RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 ATP13A3Q9H7F0 1226 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 POLR1BQ9H9Y6 1135 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 DERAQ9Y315 318 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 NRCAMQ92823 1304 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 SNPHO15079 494 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 HIST1H2ABP04908 130 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 FAM153BP0C7A2 387 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 FLT3P36888 993 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 GRM3Q14832 879 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 FAM153CQ494X1 144 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 PABPC1LQ4VXU2 614 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 FNDC3BQ53EP0 1204 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 HIST3H2AQ7L7L0 130 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 KRT77Q7Z794 578 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 SCUBE3Q8IX30 993 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 PIWIL2Q8TC59 973 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 HIST1H2ACQ93077 130 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 BHMTQ93088 406 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 KCNMB3Q9NPA1 279 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 ARL15Q9NXU5 204 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 PCDHGA4Q9Y5G9 962 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 MAP2K7O14733 419 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 DCXO43602 365 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 NDUFB5O43674 189 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 COX4I1P13073 169 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 AKR1A1P14550 325 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 OGNP20774 298 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 ATP5F1P24539 256 aaPredicted RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 ADSSP30520 456 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 PTGES3Q15185 160 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 ZNHIT3Q15649 155 aaPredicted RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 FSCN1Q16658 493 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 LY6KQ17RY6 165 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 BMT2Q1RMZ1 405 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 PAN2Q504Q3 1202 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 TFAP2DQ7Z6R9 452 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 ILDR1Q86SU0 546 aaPredicted RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 RP9Q8TA86 221 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 PTCD2Q8WV60 388 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 EDEM1Q92611 657 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 CDRT15Q96T59 188 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 CCDC28BQ9BUN5 200 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 IDI2Q9BXS1 227 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 TKTL2Q9H0I9 626 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 CCNB1IP1Q9NPC3 277 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 ATP6V1HQ9UI12 483 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 PHLPP1O60346 1717 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 NALCNQ8IZF0 1738 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 RGSL1A5PLK6 1076 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 VAPBO95292 243 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 MAP3K6O95382 1288 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 PCSK2P16519 638 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 AMPD1P23109 780 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 HTR7P34969 479 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 RAB10P61026 200 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 BOP1Q14137 746 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 FAM171A1Q5VUB5 890 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 MACC1Q6ZN28 852 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 STK32CQ86UX6 486 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 CLVS1Q8IUQ0 354 aaPredicted RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 TCAIMQ8N3R3 496 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 ZNF513Q8N8E2 541 aaPredicted RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 HEXDCQ8WVB3 486 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 FTHL17Q9BXU8 183 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 ROGDIQ9GZN7 287 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 KLHL1Q9NR64 748 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 MARCH2Q9P0N8 246 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 ZNF624Q9P2J8 865 aaPredicted RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 TNFSF13BQ9Y275 285 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 C1orf232A0A0U1RR37 186 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 CCDC182A6NF36 153 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 MGRN1O60291 552 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms