RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 PDFQ9HBH1 243 aa16.13■□□□□ 0.17
RABGGTA-206ENST00000558649 SEMA4GQ9NTN9 838 aa16.13■□□□□ 0.17
RABGGTA-206ENST00000558649 PPM1HQ9ULR3 514 aa16.13■□□□□ 0.17
RABGGTA-206ENST00000558649 SHROOM3Q8TF72 1996 aa16.13■□□□□ 0.17
RABGGTA-206ENST00000558649 CXorf51AA0A1B0GTR3 108 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 RNF103O00237 685 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 MFSD11O43934 449 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 FSBPO95073 299 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 MAP3K6O95382 1288 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 GSRP00390 522 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 PRNPP04156 253 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 KDELR1P24390 212 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 MAOBP27338 520 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 DRD3P35462 400 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 SNRPD1P62314 119 aaKnown RBP16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 CNTN1Q12860 1018 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 SF3A2Q15428 464 aaKnown RBP16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 SPDYCQ5MJ68 293 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 SYCP2LQ5T4T6 812 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 DCAF12L1Q5VU92 463 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 TCEAL6Q6IPX3 200 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 ATPAF2Q8N5M1 289 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 OR2AP1Q8NGE2 309 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 TPCN2Q8NHX9 752 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 PCDH19Q8TAB3 1148 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 CASKIN2Q8WXE0 1202 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 FOXJ1Q92949 421 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 TCEAL3Q969E4 200 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 ISG20Q96AZ6 181 aaKnown RBP16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 RNF25Q96BH1 459 aaPredicted RBP16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 GDAP1L1Q96MZ0 367 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 HEPHQ9BQS7 1158 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 MIR1-1HGQ9H1L0 117 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 SGK2Q9HBY8 427 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 DYRK4Q9NR20 520 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 TRIM10Q9UDY6 481 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 IPO11Q9UI26 975 aaKnown RBP16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 FZD4Q9ULV1 537 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 PCDHGA5Q9Y5G8 931 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 ALG6Q9Y672 507 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 WASF2Q9Y6W5 498 aa16.12■□□□□ 0.17
RABGGTA-206ENST00000558649 A0A0U1RQJ8 604 aa16.11■□□□□ 0.17
RABGGTA-206ENST00000558649 MACROD2A1Z1Q3 448 aa16.11■□□□□ 0.17
RABGGTA-206ENST00000558649 PATE3B3GLJ2 98 aa16.11■□□□□ 0.17
RABGGTA-206ENST00000558649 PALMO75781 387 aa16.11■□□□□ 0.17
RABGGTA-206ENST00000558649 IGSF6O95976 241 aa16.11■□□□□ 0.17
RABGGTA-206ENST00000558649 CYTH1Q15438 398 aa16.11■□□□□ 0.17
RABGGTA-206ENST00000558649 INO80DQ53TQ3 878 aaPredicted RBP16.11■□□□□ 0.17
RABGGTA-206ENST00000558649 NCBP2-AS2Q69YL0 99 aa16.11■□□□□ 0.17
RABGGTA-206ENST00000558649 C11orf63Q6NUN7 778 aa16.11■□□□□ 0.17
RABGGTA-206ENST00000558649 NCEH1Q6PIU2 408 aa16.11■□□□□ 0.17
RABGGTA-206ENST00000558649 C12orf50Q8NA57 414 aaPredicted RBP16.11■□□□□ 0.17
RABGGTA-206ENST00000558649 TMIEQ8NEW7 156 aa16.11■□□□□ 0.17
RABGGTA-206ENST00000558649 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.11■□□□□ 0.17
RABGGTA-206ENST00000558649 ARRDC3Q96B67 414 aa16.11■□□□□ 0.17
RABGGTA-206ENST00000558649 ZNF419Q96HQ0 510 aaPredicted RBP16.11■□□□□ 0.17
RABGGTA-206ENST00000558649 PPP1R16AQ96I34 528 aa16.11■□□□□ 0.17
RABGGTA-206ENST00000558649 CINPQ9BW66 212 aaPredicted RBP16.11■□□□□ 0.17
RABGGTA-206ENST00000558649 TMEM74BQ9NUR3 256 aa16.11■□□□□ 0.17
RABGGTA-206ENST00000558649 DDX56Q9NY93 547 aaKnown RBP16.11■□□□□ 0.17
RABGGTA-206ENST00000558649 LHX3Q9UBR4 397 aa16.11■□□□□ 0.17
RABGGTA-206ENST00000558649 EVLQ9UI08 416 aaPredicted RBP16.11■□□□□ 0.17
RABGGTA-206ENST00000558649 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.11■□□□□ 0.17
RABGGTA-206ENST00000558649 NUMA1Q14980 2115 aa16.1■□□□□ 0.17
RABGGTA-206ENST00000558649 LRRC72A6NJI9 287 aa16.1■□□□□ 0.17
RABGGTA-206ENST00000558649 PSTPIP1O43586 416 aa16.1■□□□□ 0.17
RABGGTA-206ENST00000558649 LRP3O75074 770 aa16.1■□□□□ 0.17
RABGGTA-206ENST00000558649 CFIP05156 583 aa16.1■□□□□ 0.17
RABGGTA-206ENST00000558649 C7P10643 843 aa16.1■□□□□ 0.17
RABGGTA-206ENST00000558649 MARCKSL1P49006 195 aa16.1■□□□□ 0.17
RABGGTA-206ENST00000558649 ADPRHP54922 357 aa16.1■□□□□ 0.17
RABGGTA-206ENST00000558649 IL10RBQ08334 325 aa16.1■□□□□ 0.17
RABGGTA-206ENST00000558649 KIF5AQ12840 1032 aa16.1■□□□□ 0.17
RABGGTA-206ENST00000558649 CSRP2Q16527 193 aa16.1■□□□□ 0.17
RABGGTA-206ENST00000558649 WDR45BQ5MNZ6 344 aa16.1■□□□□ 0.17
RABGGTA-206ENST00000558649 LRRC38Q5VT99 294 aa16.1■□□□□ 0.17
RABGGTA-206ENST00000558649 AGBL4Q5VU57 503 aa16.1■□□□□ 0.17
RABGGTA-206ENST00000558649 PRR23CQ6ZRP0 262 aa16.1■□□□□ 0.17
RABGGTA-206ENST00000558649 RFX6Q8HWS3 928 aa16.1■□□□□ 0.17
RABGGTA-206ENST00000558649 SYT12Q8IV01 421 aa16.1■□□□□ 0.17
RABGGTA-206ENST00000558649 TXLNBQ8N3L3 684 aa16.1■□□□□ 0.17
RABGGTA-206ENST00000558649 CADM4Q8NFZ8 388 aa16.1■□□□□ 0.17
RABGGTA-206ENST00000558649 MAK16Q9BXY0 300 aaKnown RBP16.1■□□□□ 0.17
RABGGTA-206ENST00000558649 VPS45Q9NRW7 570 aa16.1■□□□□ 0.17
RABGGTA-206ENST00000558649 PILRBQ9UKJ0 227 aa16.1■□□□□ 0.17
RABGGTA-206ENST00000558649 PLXNA2O75051 1894 aa16.1■□□□□ 0.17
RABGGTA-206ENST00000558649 TBC1D3DA0A087WVF3 549 aa16.09■□□□□ 0.17
RABGGTA-206ENST00000558649 TBC1D3IA0A087WXS9 549 aa16.09■□□□□ 0.17
RABGGTA-206ENST00000558649 TBC1D3EA0A087X179 549 aa16.09■□□□□ 0.17
RABGGTA-206ENST00000558649 TBC1D3KA0A087X1G2 549 aa16.09■□□□□ 0.17
RABGGTA-206ENST00000558649 TBC1D3FA6NER0 549 aaPredicted RBP16.09■□□□□ 0.17
RABGGTA-206ENST00000558649 C3orf70A6NLC5 250 aaPredicted RBP16.09■□□□□ 0.17
RABGGTA-206ENST00000558649 METTL12A8MUP2 240 aa16.09■□□□□ 0.17
RABGGTA-206ENST00000558649 BTNL10A8MVZ5 291 aa16.09■□□□□ 0.17
RABGGTA-206ENST00000558649 TBC1D3LB9A6J9 549 aa16.09■□□□□ 0.17
RABGGTA-206ENST00000558649 INSIG1O15503 277 aa16.09■□□□□ 0.17
RABGGTA-206ENST00000558649 PJA2O43164 708 aa16.09■□□□□ 0.17
RABGGTA-206ENST00000558649 UGT2B4P06133 528 aa16.09■□□□□ 0.17
RABGGTA-206ENST00000558649 TBC1D3HP0C7X1 549 aa16.09■□□□□ 0.17
RABGGTA-206ENST00000558649 ZNF806P0C7X5 589 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms