RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 TIPRLO75663 272 aa6.74□□□□□ -1.33
LEMD3-206ENST00000545026 SEC14L2O76054 403 aa6.74□□□□□ -1.33
LEMD3-206ENST00000545026 TUBB4AP04350 444 aa6.74□□□□□ -1.33
LEMD3-206ENST00000545026 CENPBP07199 599 aaPredicted RBP6.74□□□□□ -1.33
LEMD3-206ENST00000545026 SPARCP09486 303 aa6.74□□□□□ -1.33
LEMD3-206ENST00000545026 CPOXP36551 454 aa6.74□□□□□ -1.33
LEMD3-206ENST00000545026 CTCFP49711 727 aaPredicted RBP6.74□□□□□ -1.33
LEMD3-206ENST00000545026 PMPCAQ10713 525 aa6.74□□□□□ -1.33
LEMD3-206ENST00000545026 FOXF2Q12947 444 aa6.74□□□□□ -1.33
LEMD3-206ENST00000545026 MAMLD1Q13495 774 aa6.74□□□□□ -1.33
LEMD3-206ENST00000545026 EDRF1Q3B7T1 1238 aa6.74□□□□□ -1.33
LEMD3-206ENST00000545026 CEP78Q5JTW2 689 aa6.74□□□□□ -1.33
LEMD3-206ENST00000545026 AAGABQ6PD74 315 aa6.74□□□□□ -1.33
LEMD3-206ENST00000545026 GALNT16Q8N428 558 aa6.74□□□□□ -1.33
LEMD3-206ENST00000545026 TMEM170AQ8WVE7 144 aa6.74□□□□□ -1.33
LEMD3-206ENST00000545026 USP6NLQ92738 828 aa6.74□□□□□ -1.33
LEMD3-206ENST00000545026 NEUROD6Q96NK8 337 aa6.74□□□□□ -1.33
LEMD3-206ENST00000545026 SH2D3AQ9BRG2 576 aa6.74□□□□□ -1.33
LEMD3-206ENST00000545026 SDF4Q9BRK5 362 aa6.74□□□□□ -1.33
LEMD3-206ENST00000545026 GLIS2Q9BZE0 524 aaPredicted RBP6.74□□□□□ -1.33
LEMD3-206ENST00000545026 GHITMQ9H3K2 345 aa6.74□□□□□ -1.33
LEMD3-206ENST00000545026 RIOX1Q9H6W3 641 aa6.74□□□□□ -1.33
LEMD3-206ENST00000545026 KLHL13Q9P2N7 655 aa6.74□□□□□ -1.33
LEMD3-206ENST00000545026 GPR34Q9UPC5 381 aa6.74□□□□□ -1.33
LEMD3-206ENST00000545026 RUSC2Q8N2Y8 1516 aa6.74□□□□□ -1.33
LEMD3-206ENST00000545026 WDR33Q9C0J8 1336 aaKnown RBP6.74□□□□□ -1.33
LEMD3-206ENST00000545026 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.73□□□□□ -1.33
LEMD3-206ENST00000545026 FAM157AC9JC47 383 aa6.73□□□□□ -1.33
LEMD3-206ENST00000545026 RHODO00212 210 aa6.73□□□□□ -1.33
LEMD3-206ENST00000545026 CIITAP33076 1130 aa6.73□□□□□ -1.33
LEMD3-206ENST00000545026 ARL3P36405 182 aa6.73□□□□□ -1.33
LEMD3-206ENST00000545026 MLH1P40692 756 aa6.73□□□□□ -1.33
LEMD3-206ENST00000545026 CPA2P48052 419 aa6.73□□□□□ -1.33
LEMD3-206ENST00000545026 TMEM115Q12893 351 aaPredicted RBP6.73□□□□□ -1.33
LEMD3-206ENST00000545026 SLC10A2Q12908 348 aaPredicted RBP6.73□□□□□ -1.33
LEMD3-206ENST00000545026 SLC9C1Q4G0N8 1177 aa6.73□□□□□ -1.33
LEMD3-206ENST00000545026 MIDNQ504T8 468 aa6.73□□□□□ -1.33
LEMD3-206ENST00000545026 SERTAD4-AS1Q5TG53 156 aa6.73□□□□□ -1.33
LEMD3-206ENST00000545026 PAPD7Q5XG87 772 aaKnown RBP6.73□□□□□ -1.33
LEMD3-206ENST00000545026 ISM2Q6H9L7 571 aa6.73□□□□□ -1.33
LEMD3-206ENST00000545026 MIS18BP1Q6P0N0 1132 aa6.73□□□□□ -1.33
LEMD3-206ENST00000545026 CDC73Q6P1J9 531 aa6.73□□□□□ -1.33
LEMD3-206ENST00000545026 C16orf54Q6UWD8 224 aa6.73□□□□□ -1.33
LEMD3-206ENST00000545026 PTF1AQ7RTS3 328 aa6.73□□□□□ -1.33
LEMD3-206ENST00000545026 DDIASQ8IXT1 998 aa6.73□□□□□ -1.33
LEMD3-206ENST00000545026 OR4N2Q8NGD1 307 aa6.73□□□□□ -1.33
LEMD3-206ENST00000545026 RSRC1Q96IZ7 334 aaKnown RBP6.73□□□□□ -1.33
LEMD3-206ENST00000545026 TIGD1Q96MW7 591 aa6.73□□□□□ -1.33
LEMD3-206ENST00000545026 FAM118BQ9BPY3 351 aa6.73□□□□□ -1.33
LEMD3-206ENST00000545026 SPAG4Q9NPE6 437 aa6.73□□□□□ -1.33
LEMD3-206ENST00000545026 PAPOLBQ9NRJ5 636 aaKnown RBP6.73□□□□□ -1.33
LEMD3-206ENST00000545026 PCDHGB5Q9Y5G0 923 aa6.73□□□□□ -1.33
LEMD3-206ENST00000545026 KIR2DS5A0A0G2JLQ3 304 aa6.72□□□□□ -1.33
LEMD3-206ENST00000545026 CBY3A6NI87 242 aa6.72□□□□□ -1.33
LEMD3-206ENST00000545026 KIR2DS3K7RE56 304 aa6.72□□□□□ -1.33
LEMD3-206ENST00000545026 TMCC1O94876 653 aa6.72□□□□□ -1.33
LEMD3-206ENST00000545026 CCNDBP1O95273 360 aa6.72□□□□□ -1.33
LEMD3-206ENST00000545026 NUDT3O95989 172 aa6.72□□□□□ -1.33
LEMD3-206ENST00000545026 HEXAP06865 529 aa6.72□□□□□ -1.33
LEMD3-206ENST00000545026 YWHAQP27348 245 aa6.72□□□□□ -1.33
LEMD3-206ENST00000545026 HOXD13P35453 343 aa6.72□□□□□ -1.33
LEMD3-206ENST00000545026 RARSP54136 660 aaKnown RBP6.72□□□□□ -1.33
LEMD3-206ENST00000545026 SLC18A2Q05940 514 aa6.72□□□□□ -1.33
LEMD3-206ENST00000545026 TTC39AQ5SRH9 613 aa6.72□□□□□ -1.33
LEMD3-206ENST00000545026 ATG9BQ674R7 924 aa6.72□□□□□ -1.33
LEMD3-206ENST00000545026 SLC46A3Q7Z3Q1 461 aa6.72□□□□□ -1.33
LEMD3-206ENST00000545026 IGFN1Q86VF2 1251 aa6.72□□□□□ -1.33
LEMD3-206ENST00000545026 CMASQ8NFW8 434 aaPredicted RBP6.72□□□□□ -1.33
LEMD3-206ENST00000545026 CADM4Q8NFZ8 388 aa6.72□□□□□ -1.33
LEMD3-206ENST00000545026 KRTAP9-3Q9BYQ3 159 aa6.72□□□□□ -1.33
LEMD3-206ENST00000545026 SEPT11Q9NVA2 429 aaKnown RBP6.72□□□□□ -1.33
LEMD3-206ENST00000545026 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.72□□□□□ -1.33
LEMD3-206ENST00000545026 ZNF335Q9H4Z2 1342 aaPredicted RBP6.72□□□□□ -1.33
LEMD3-206ENST00000545026 TRBV5-3A0A0A0MS03 114 aa6.71□□□□□ -1.34
LEMD3-206ENST00000545026 IFNL4K9M1U5 179 aa6.71□□□□□ -1.34
LEMD3-206ENST00000545026 TAF4O00268 1085 aa6.71□□□□□ -1.34
LEMD3-206ENST00000545026 TP73O15350 636 aa6.71□□□□□ -1.34
LEMD3-206ENST00000545026 SEC31AO94979 1220 aaKnown RBP6.71□□□□□ -1.34
LEMD3-206ENST00000545026 CTSAP10619 480 aa6.71□□□□□ -1.34
LEMD3-206ENST00000545026 BMP5P22003 454 aa6.71□□□□□ -1.34
LEMD3-206ENST00000545026 ATP5F1P24539 256 aaPredicted RBP6.71□□□□□ -1.34
LEMD3-206ENST00000545026 SLC16A2P36021 539 aa6.71□□□□□ -1.34
LEMD3-206ENST00000545026 DPP6P42658 865 aa6.71□□□□□ -1.34
LEMD3-206ENST00000545026 CLCNKBP51801 687 aa6.71□□□□□ -1.34
LEMD3-206ENST00000545026 YWHAZP63104 245 aaKnown RBP6.71□□□□□ -1.34
LEMD3-206ENST00000545026 GHRHRQ02643 423 aa6.71□□□□□ -1.34
LEMD3-206ENST00000545026 TOMM20Q15388 145 aa6.71□□□□□ -1.34
LEMD3-206ENST00000545026 TAF11Q15544 211 aa6.71□□□□□ -1.34
LEMD3-206ENST00000545026 ALG10Q5BKT4 473 aa6.71□□□□□ -1.34
LEMD3-206ENST00000545026 ALG10BQ5I7T1 473 aa6.71□□□□□ -1.34
LEMD3-206ENST00000545026 TXNDC8Q6A555 127 aa6.71□□□□□ -1.34
LEMD3-206ENST00000545026 KLHL24Q6TFL4 600 aa6.71□□□□□ -1.34
LEMD3-206ENST00000545026 CCDC129Q6ZRS4 1044 aa6.71□□□□□ -1.34
LEMD3-206ENST00000545026 RD3Q7Z3Z2 195 aa6.71□□□□□ -1.34
LEMD3-206ENST00000545026 KDELC2Q7Z4H8 507 aa6.71□□□□□ -1.34
LEMD3-206ENST00000545026 GPAT4Q86UL3 456 aa6.71□□□□□ -1.34
LEMD3-206ENST00000545026 EIF2B3Q9NR50 452 aaKnown RBP6.71□□□□□ -1.34
LEMD3-206ENST00000545026 TMEM45AQ9NWC5 275 aa6.71□□□□□ -1.34
LEMD3-206ENST00000545026 PLEKHB1Q9UF11 243 aaPredicted RBP6.71□□□□□ -1.34
LEMD3-206ENST00000545026 TBC1D29Q9UFV1 150 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms