RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 SEPT4O43236 478 aa3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 METTL18O95568 372 aa3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 PPP1R3DO95685 299 aa3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 MYZAPP0CAP1 466 aa3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 ZNF12P17014 697 aa3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 RXRAP19793 462 aa3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 SKIV2L2P42285 1042 aaKnown RBP3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 BNC1Q01954 994 aa3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 MYBPC2Q14324 1141 aa3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 ME3Q16798 604 aa3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 PDXDC1Q6P996 788 aa3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 FJX1Q86VR8 437 aa3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 GALNT15Q8N3T1 639 aa3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 TRAPPC12Q8WVT3 735 aa3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 TMED6Q8WW62 240 aa3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 TMEM18Q96B42 140 aa3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 RNFT2Q96EX2 444 aa3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 MASTLQ96GX5 879 aa3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 ZNF333Q96JL9 665 aa3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 FAM84BQ96KN1 310 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 GFM1Q96RP9 751 aaKnown RBP3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 NPFFR1Q9GZQ6 430 aa3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 WDR6Q9NNW5 1121 aaKnown RBP3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 GRHL1Q9NZI5 618 aa3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 FEM1BQ9UK73 627 aa3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 LINC01553A4QN01 128 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 SLC25A17O43808 307 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 SOX30O94993 753 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 ZBTB11O95625 1053 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 TK1P04183 234 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 PRSS2P07478 247 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 CKMT1AP12532 417 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 ENO3P13929 434 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 NAGAP17050 411 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 GJC1P36383 396 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 KCNJ4P48050 445 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 AARSP49588 968 aaKnown RBP eCLIP3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 NUDT6P53370 316 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 GRSF1Q12849 480 aaKnown RBP eCLIP3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 CTTNQ14247 550 aaKnown RBP3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 RPE65Q16518 533 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 IZUMO4Q1ZYL8 232 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 TDRD12Q587J7 1177 aaKnown RBP3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 PRSS57Q6UWY2 283 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 ARMC9Q7Z3E5 817 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 PALB2Q86YC2 1186 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 ZDHHC23Q8IYP9 409 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 CLIP4Q8N3C7 705 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 ENAHQ8N8S7 591 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 OR4N2Q8NGD1 307 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 OR14A16Q8NHC5 309 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 CEP70Q8NHQ1 597 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 RASSF8Q8NHQ8 419 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 FAM167BQ9BTA0 163 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 PAGR1Q9BTK6 254 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 TM6SF1Q9BZW5 370 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 PTPRHQ9HD43 1115 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 OCIAD1Q9NX40 245 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 KIF17Q9P2E2 1029 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 DNAJC16Q9Y2G8 782 aa3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 SRPRBQ9Y5M8 271 aaKnown RBP3.61□□□□□ -1.83
HMGB1P29-201ENST00000505659 KDM4EB2RXH2 506 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P29-201ENST00000505659 ITM2AO43736 263 aa3.6□□□□□ -1.83
HMGB1P29-201ENST00000505659 NBNO60934 754 aa3.6□□□□□ -1.83
HMGB1P29-201ENST00000505659 GLUD1P00367 558 aa3.6□□□□□ -1.83
HMGB1P29-201ENST00000505659 YWHAQP27348 245 aa3.6□□□□□ -1.83
HMGB1P29-201ENST00000505659 DCTDP32321 178 aa3.6□□□□□ -1.83
HMGB1P29-201ENST00000505659 AMTP48728 403 aa3.6□□□□□ -1.83
HMGB1P29-201ENST00000505659 GLUD2P49448 558 aa3.6□□□□□ -1.83
HMGB1P29-201ENST00000505659 RRP1P56182 461 aaKnown RBP3.6□□□□□ -1.83
HMGB1P29-201ENST00000505659 ACTR2P61160 394 aa3.6□□□□□ -1.83
HMGB1P29-201ENST00000505659 KIF5AQ12840 1032 aa3.6□□□□□ -1.83
HMGB1P29-201ENST00000505659 PLCB4Q15147 1175 aa3.6□□□□□ -1.83
HMGB1P29-201ENST00000505659 ANO1Q5XXA6 986 aa3.6□□□□□ -1.83
HMGB1P29-201ENST00000505659 C8orf82Q6P1X6 216 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P29-201ENST00000505659 GJB7Q6PEY0 223 aa3.6□□□□□ -1.83
HMGB1P29-201ENST00000505659 DLK2Q6UY11 383 aa3.6□□□□□ -1.83
HMGB1P29-201ENST00000505659 MON1BQ7L1V2 547 aa3.6□□□□□ -1.83
HMGB1P29-201ENST00000505659 NR2C2APQ86WQ0 139 aa3.6□□□□□ -1.83
HMGB1P29-201ENST00000505659 TEX45Q8NA69 505 aa3.6□□□□□ -1.83
HMGB1P29-201ENST00000505659 MSTO1Q9BUK6 570 aa3.6□□□□□ -1.83
HMGB1P29-201ENST00000505659 C6orf106Q9H6K1 298 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P29-201ENST00000505659 MVB12BQ9H7P6 319 aa3.6□□□□□ -1.83
HMGB1P29-201ENST00000505659 ATP8A2Q9NTI2 1148 aa3.6□□□□□ -1.83
HMGB1P29-201ENST00000505659 DERAQ9Y315 318 aa3.6□□□□□ -1.83
HMGB1P29-201ENST00000505659 PCDHGB1Q9Y5G3 927 aa3.6□□□□□ -1.83
HMGB1P29-201ENST00000505659 IGHV4-28A0A0C4DH34 117 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 SRRM3A6NNA2 597 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 FAM157AC9JC47 383 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 EYA2O00167 538 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 ACOT8O14734 319 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 ASAP2O43150 1006 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 DHX16O60231 1041 aaKnown RBP3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 HBP1O60381 514 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 LDHAP00338 332 aaKnown RBP3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 ADAP00813 363 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 IL1AP01583 271 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 MMP3P08254 477 aa3.59□□□□□ -1.83
HMGB1P29-201ENST00000505659 FCGR1AP12314 374 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms