RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 HFE2Q6ZVN8 426 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 LRRC8DQ7L1W4 858 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 ULK2Q8IYT8 1036 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 DIS3LQ8TF46 1054 aaKnown RBP11.46□□□□□ -0.58
SMPD4-218ENST00000482171 SNX19Q92543 992 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 LRRC39Q96DD0 335 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 HIST1H2AHQ96KK5 128 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 UROC1Q96N76 676 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 ABCA3Q99758 1704 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 HIST1H2AJQ99878 128 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 H2AFJQ9BTM1 129 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 STRA6Q9BX79 667 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 WASF2Q9Y6W5 498 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 MAN1A2O60476 641 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 HDCP19113 662 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 NPY2RP49146 381 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 PTP4A2Q12974 167 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 ANO7Q6IWH7 933 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 VSTM1Q6UX27 236 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 TAC4Q86UU9 113 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 TNS4Q8IZW8 715 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 VAT1Q99536 393 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 TMEM79Q9BSE2 394 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 DDX28Q9NUL7 540 aaKnown RBP11.46□□□□□ -0.58
SMPD4-218ENST00000482171 UBA2Q9UBT2 640 aaPredicted RBP11.46□□□□□ -0.58
SMPD4-218ENST00000482171 ZMYND8Q9ULU4 1186 aaPredicted RBP11.46□□□□□ -0.58
SMPD4-218ENST00000482171 FAM50BQ9Y247 325 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 F8W8V4 182 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 ANGPT2O15123 496 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 VAV1P15498 845 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 HSPA13P48723 471 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 CHN2P52757 468 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 DAOAP59103 153 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 USP4Q13107 963 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 UBAP2LQ14157 1087 aaKnown RBP11.45□□□□□ -0.58
SMPD4-218ENST00000482171 CAPRIN1Q14444 709 aaKnown RBP11.45□□□□□ -0.58
SMPD4-218ENST00000482171 LIN52Q52LA3 116 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 HECTD3Q5T447 861 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 RNASEH2BQ5TBB1 312 aaKnown RBP11.45□□□□□ -0.58
SMPD4-218ENST00000482171 MON1AQ86VX9 555 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 RASAL3Q86YV0 1011 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 ZNF513Q8N8E2 541 aaPredicted RBP11.45□□□□□ -0.58
SMPD4-218ENST00000482171 SH3KBP1Q96B97 665 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 ZNF558Q96NG5 402 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 EFCAB1Q9HAE3 211 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 PALMDQ9NP74 551 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 ACSS2Q9NR19 701 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 RNF112Q9ULX5 631 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 COL22A1Q8NFW1 1626 aaPredicted RBP11.45□□□□□ -0.58
SMPD4-218ENST00000482171 MEIS3P2A8K0S8 358 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 STK25O00506 426 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 TMEM63AO94886 807 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 SELPP16109 830 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 CNTFP26441 200 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 TKTP29401 623 aaKnown RBP11.45□□□□□ -0.58
SMPD4-218ENST00000482171 RGS4P49798 205 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 PKNOX1P55347 436 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 TRIM32Q13049 653 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 NRF1Q16656 503 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 ARHGAP15Q53QZ3 475 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 SPANXN3Q5MJ09 141 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 CLEC20AQ6ZU45 233 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 DHDDSQ86SQ9 333 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 ZBTB46Q86UZ6 589 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 OSTM1Q86WC4 334 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 CLVS1Q8IUQ0 354 aaPredicted RBP11.45□□□□□ -0.58
SMPD4-218ENST00000482171 EGFL6Q8IUX8 553 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 SPATA22Q8NHS9 363 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 TUBGCP3Q96CW5 907 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 NR1H4Q96RI1 486 aaPredicted RBP11.45□□□□□ -0.58
SMPD4-218ENST00000482171 ZYG11BQ9C0D3 744 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 THAP1Q9NVV9 213 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 GID8Q9NWU2 228 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 KCNK4Q9NYG8 393 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 SCN9AQ15858 1988 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 SLC1A6P48664 564 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 SMAD3P84022 425 aaKnown RBP11.45□□□□□ -0.58
SMPD4-218ENST00000482171 GAD2Q05329 585 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 INPP5AQ14642 412 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 FAM187BQ17R55 369 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 ZBTB49Q6ZSB9 765 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 ANKS3Q6ZW76 656 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 ZSCAN18Q8TBC5 510 aaPredicted RBP11.45□□□□□ -0.58
SMPD4-218ENST00000482171 ZNF398Q8TD17 642 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 CDRT15Q96T59 188 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 TTPALQ9BTX7 342 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 CADM1Q9BY67 442 aaKnown RBP11.45□□□□□ -0.58
SMPD4-218ENST00000482171 BRD8Q9H0E9 1235 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 MMADHCQ9H3L0 296 aaPredicted RBP11.45□□□□□ -0.58
SMPD4-218ENST00000482171 CAB39LQ9H9S4 337 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 CASS4Q9NQ75 786 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 PDLIM7Q9NR12 457 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 RGS18Q9NS28 235 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 EFR3BQ9Y2G0 817 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 PAPPAQ13219 1627 aa11.45□□□□□ -0.58
SMPD4-218ENST00000482171 SCN7AQ01118 1682 aa11.44□□□□□ -0.58
SMPD4-218ENST00000482171 MAGEB16A2A368 324 aa11.44□□□□□ -0.58
SMPD4-218ENST00000482171 PEX11AO75192 247 aa11.44□□□□□ -0.58
SMPD4-218ENST00000482171 ESRRBO95718 433 aa11.44□□□□□ -0.58
SMPD4-218ENST00000482171 CRTAMO95727 393 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms