RNA–Protein interactions for RNA: ENST00000377080.7

USP11-203, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-203ENST00000377080 TJAP1Q5JTD0 557 aa10.21□□□□□ -0.77
USP11-203ENST00000377080 SYPL2Q5VXT5 272 aa10.21□□□□□ -0.77
USP11-203ENST00000377080 SEL1L3Q68CR1 1132 aa10.21□□□□□ -0.77
USP11-203ENST00000377080 PKN3Q6P5Z2 889 aa10.21□□□□□ -0.77
USP11-203ENST00000377080 ATG14Q6ZNE5 492 aa10.21□□□□□ -0.77
USP11-203ENST00000377080 ZC3HC1Q86WB0 502 aaKnown RBP10.21□□□□□ -0.77
USP11-203ENST00000377080 OSTM1Q86WC4 334 aa10.21□□□□□ -0.77
USP11-203ENST00000377080 PLD6Q8N2A8 252 aaKnown RBP10.21□□□□□ -0.77
USP11-203ENST00000377080 DNAAF3Q8N9W5 541 aa10.21□□□□□ -0.77
USP11-203ENST00000377080 SLC26A7Q8TE54 656 aa10.21□□□□□ -0.77
USP11-203ENST00000377080 FAM149B1Q96BN6 582 aa10.21□□□□□ -0.77
USP11-203ENST00000377080 DUS3LQ96G46 650 aaKnown RBP10.21□□□□□ -0.77
USP11-203ENST00000377080 MAML3Q96JK9 1138 aa10.21□□□□□ -0.77
USP11-203ENST00000377080 MAELQ96JY0 434 aaKnown RBP10.21□□□□□ -0.77
USP11-203ENST00000377080 PPP1R10Q96QC0 940 aaKnown RBP10.21□□□□□ -0.77
USP11-203ENST00000377080 HAPLN3Q96S86 360 aa10.21□□□□□ -0.77
USP11-203ENST00000377080 MLPHQ9BV36 600 aaPredicted RBP10.21□□□□□ -0.77
USP11-203ENST00000377080 ACE2Q9BYF1 805 aaPredicted RBP10.21□□□□□ -0.77
USP11-203ENST00000377080 PRKD2Q9BZL6 878 aa10.21□□□□□ -0.77
USP11-203ENST00000377080 CXCL16Q9H2A7 254 aa10.21□□□□□ -0.77
USP11-203ENST00000377080 NXF3Q9H4D5 531 aaKnown RBP10.21□□□□□ -0.77
USP11-203ENST00000377080 VCX3AQ9NNX9 186 aa10.21□□□□□ -0.77
USP11-203ENST00000377080 CHST12Q9NRB3 414 aa10.21□□□□□ -0.77
USP11-203ENST00000377080 PADI4Q9UM07 663 aa10.21□□□□□ -0.77
USP11-203ENST00000377080 ACOT9Q9Y305 439 aa10.21□□□□□ -0.77
USP11-203ENST00000377080 MFHAS1Q9Y4C4 1052 aa10.21□□□□□ -0.77
USP11-203ENST00000377080 COMMD3-BMI1R4GMX3 469 aa10.21□□□□□ -0.77
USP11-203ENST00000377080 ZNF638Q14966 1978 aaKnown RBP10.21□□□□□ -0.78
USP11-203ENST00000377080 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.2□□□□□ -0.78
USP11-203ENST00000377080 FGF10O15520 208 aaPredicted RBP10.2□□□□□ -0.78
USP11-203ENST00000377080 GRID2O43424 1007 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 FOSL2P15408 326 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 NCF2P19878 526 aaPredicted RBP10.2□□□□□ -0.78
USP11-203ENST00000377080 PIK3R1P27986 724 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 HOXC8P31273 242 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 HOXC13P31276 330 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 PPARGP37231 505 aaPredicted RBP10.2□□□□□ -0.78
USP11-203ENST00000377080 CRADDP78560 199 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 MSLNQ13421 630 aaPredicted RBP10.2□□□□□ -0.78
USP11-203ENST00000377080 CYLC2Q14093 348 aaPredicted RBP10.2□□□□□ -0.78
USP11-203ENST00000377080 MAPRE2Q15555 327 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 PSMD5Q16401 504 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 USP41Q3LFD5 358 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 LIN52Q52LA3 116 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 PIGGQ5H8A4 983 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 RALGPS1Q5JS13 557 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 BRMS1LQ5PSV4 323 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 NAPRTQ6XQN6 538 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 RNF111Q6ZNA4 994 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 FRMD7Q6ZUT3 714 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 RSPH3Q86UC2 560 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 PQLC1Q8N2U9 271 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 ZNF781Q8N8C0 355 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 SMG8Q8ND04 991 aaKnown RBP10.2□□□□□ -0.78
USP11-203ENST00000377080 ICA1LQ8NDH6 482 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 SPDYE1Q8NFV5 336 aaPredicted RBP10.2□□□□□ -0.78
USP11-203ENST00000377080 RIN3Q8TB24 985 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 GDPD5Q8WTR4 605 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 MYLIPQ8WY64 445 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 DTNBP1Q96EV8 351 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 LENG8Q96PV6 779 aaPredicted RBP10.2□□□□□ -0.78
USP11-203ENST00000377080 RANBP9Q96S59 729 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 IL12RB2Q99665 862 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 MRPL57Q9BQC6 102 aaKnown RBP10.2□□□□□ -0.78
USP11-203ENST00000377080 KATNAL1Q9BW62 490 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 WDCPQ9H6R7 721 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 ENTPD7Q9NQZ7 604 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 C20orf96Q9NUD7 363 aaPredicted RBP10.2□□□□□ -0.78
USP11-203ENST00000377080 GJD2Q9UKL4 321 aa10.2□□□□□ -0.78
USP11-203ENST00000377080 GNEQ9Y223 722 aaKnown RBP10.2□□□□□ -0.78
USP11-203ENST00000377080 ANKRD33BA6NCL7 494 aa10.19□□□□□ -0.78
USP11-203ENST00000377080 HHLA1C9JL84 531 aa10.19□□□□□ -0.78
USP11-203ENST00000377080 DCXO43602 365 aa10.19□□□□□ -0.78
USP11-203ENST00000377080 ZBTB14O43829 449 aa10.19□□□□□ -0.78
USP11-203ENST00000377080 ATP9BO43861 1147 aa10.19□□□□□ -0.78
USP11-203ENST00000377080 KPNA6O60684 536 aa10.19□□□□□ -0.78
USP11-203ENST00000377080 BCAS2O75934 225 aaPredicted RBP10.19□□□□□ -0.78
USP11-203ENST00000377080 PAPSS2O95340 614 aaPredicted RBP10.19□□□□□ -0.78
USP11-203ENST00000377080 TOP3BO95985 862 aaKnown RBP10.19□□□□□ -0.78
USP11-203ENST00000377080 IGLV3-25P01717 112 aa10.19□□□□□ -0.78
USP11-203ENST00000377080 LTFP02788 710 aa10.19□□□□□ -0.78
USP11-203ENST00000377080 HOXB8P17481 243 aaPredicted RBP10.19□□□□□ -0.78
USP11-203ENST00000377080 PAMP19021 973 aa10.19□□□□□ -0.78
USP11-203ENST00000377080 ME2P23368 584 aa10.19□□□□□ -0.78
USP11-203ENST00000377080 PCSK1P29120 753 aa10.19□□□□□ -0.78
USP11-203ENST00000377080 GRIA4P48058 902 aa10.19□□□□□ -0.78
USP11-203ENST00000377080 CHN2P52757 468 aa10.19□□□□□ -0.78
USP11-203ENST00000377080 GEMP55040 296 aa10.19□□□□□ -0.78
USP11-203ENST00000377080 RAB10P61026 200 aa10.19□□□□□ -0.78
USP11-203ENST00000377080 POU4F1Q01851 419 aa10.19□□□□□ -0.78
USP11-203ENST00000377080 SOX4Q06945 474 aaPredicted RBP10.19□□□□□ -0.78
USP11-203ENST00000377080 NSUN2Q08J23 767 aaKnown RBP eCLIP10.19□□□□□ -0.78
USP11-203ENST00000377080 TRAP1Q12931 704 aaKnown RBP10.19□□□□□ -0.78
USP11-203ENST00000377080 TRIM32Q13049 653 aa10.19□□□□□ -0.78
USP11-203ENST00000377080 STX5Q13190 355 aa10.19□□□□□ -0.78
USP11-203ENST00000377080 CUL3Q13618 768 aa10.19□□□□□ -0.78
USP11-203ENST00000377080 SLC14A2Q15849 920 aa10.19□□□□□ -0.78
USP11-203ENST00000377080 ZNF423Q2M1K9 1284 aa10.19□□□□□ -0.78
USP11-203ENST00000377080 SPATS1Q496A3 300 aa10.19□□□□□ -0.78
USP11-203ENST00000377080 SLC9B1Q4ZJI4 515 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms