RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 CBX8Q9HC52 389 aa17.39■□□□□ 0.37
BRCC3-202ENST00000340647 NEUROG3Q9Y4Z2 214 aa17.39■□□□□ 0.37
BRCC3-202ENST00000340647 PKD1L2Q7Z442 2459 aa17.39■□□□□ 0.37
BRCC3-202ENST00000340647 DSPP15924 2871 aaKnown RBP17.38■□□□□ 0.37
BRCC3-202ENST00000340647 LAMA5O15230 3695 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 GOLGA4Q13439 2230 aaKnown RBP17.38■□□□□ 0.37
BRCC3-202ENST00000340647 SYCE3A1L190 88 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 SMTNL1A8MU46 457 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 TMCO5BA8MYB1 307 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 TLR4O00206 839 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 KPNA3O00505 521 aaPredicted RBP17.38■□□□□ 0.37
BRCC3-202ENST00000340647 FLRT2O43155 660 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 SPINT1O43278 529 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 NXPH1P58417 271 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 SLC20A2Q08357 652 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 COL9A2Q14055 689 aaPredicted RBP17.38■□□□□ 0.37
BRCC3-202ENST00000340647 FGL2Q14314 439 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 CA9Q16790 459 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 ZNF284Q2VY69 593 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 CARD16Q5EG05 197 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 HGSNATQ68CP4 663 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 NAPEPLDQ6IQ20 393 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 LUZP1Q86V48 1076 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 GATAD2AQ86YP4 633 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 RHBDD1Q8TEB9 315 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 SAP25Q8TEE9 199 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 KLK6Q92876 244 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 VCPIP1Q96JH7 1222 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 ELF4Q99607 663 aaPredicted RBP17.38■□□□□ 0.37
BRCC3-202ENST00000340647 CNPY3Q9BT09 278 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 HDAC8Q9BY41 377 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 RETREG1Q9H6L5 497 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 IL36AQ9UHA7 158 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 MSRB2Q9Y3D2 182 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 MYLKQ15746 1914 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 NBEAQ8NFP9 2946 aa17.38■□□□□ 0.37
BRCC3-202ENST00000340647 CXorf51AA0A1B0GTR3 108 aa17.37■□□□□ 0.37
BRCC3-202ENST00000340647 A0A1W2PQU0 124 aa17.37■□□□□ 0.37
BRCC3-202ENST00000340647 WASH4PA8MWX3 477 aa17.37■□□□□ 0.37
BRCC3-202ENST00000340647 RNGTTO60942 597 aaKnown RBP17.37■□□□□ 0.37
BRCC3-202ENST00000340647 SKILP12757 684 aa17.37■□□□□ 0.37
BRCC3-202ENST00000340647 TNFAIP3P21580 790 aa17.37■□□□□ 0.37
BRCC3-202ENST00000340647 CCT8P50990 548 aa17.37■□□□□ 0.37
BRCC3-202ENST00000340647 CCNHP51946 323 aaPredicted RBP17.37■□□□□ 0.37
BRCC3-202ENST00000340647 BNIP3Q12983 259 aa17.37■□□□□ 0.37
BRCC3-202ENST00000340647 KLHL40Q2TBA0 621 aa17.37■□□□□ 0.37
BRCC3-202ENST00000340647 TMEM259Q4ZIN3 620 aa17.37■□□□□ 0.37
BRCC3-202ENST00000340647 RETSATQ6NUM9 610 aa17.37■□□□□ 0.37
BRCC3-202ENST00000340647 ERN2Q76MJ5 926 aaKnown RBP17.37■□□□□ 0.37
BRCC3-202ENST00000340647 PCDH20Q8N6Y1 951 aaKnown RBP17.37■□□□□ 0.37
BRCC3-202ENST00000340647 RTL3Q8N8U3 475 aaKnown RBP17.37■□□□□ 0.37
BRCC3-202ENST00000340647 MFSD2AQ8NA29 543 aa17.37■□□□□ 0.37
BRCC3-202ENST00000340647 ISG20Q96AZ6 181 aaKnown RBP17.37■□□□□ 0.37
BRCC3-202ENST00000340647 TM6SF2Q9BZW4 377 aa17.37■□□□□ 0.37
BRCC3-202ENST00000340647 MAGEH1Q9H213 219 aa17.37■□□□□ 0.37
BRCC3-202ENST00000340647 PREBQ9HCU5 417 aa17.37■□□□□ 0.37
BRCC3-202ENST00000340647 AASDHPPTQ9NRN7 309 aa17.37■□□□□ 0.37
BRCC3-202ENST00000340647 GPATCH2LQ9NWQ4 482 aa17.37■□□□□ 0.37
BRCC3-202ENST00000340647 TMEM191CA6NGB0 347 aa17.36■□□□□ 0.37
BRCC3-202ENST00000340647 KDELR3O43731 214 aa17.36■□□□□ 0.37
BRCC3-202ENST00000340647 PRNPP04156 253 aa17.36■□□□□ 0.37
BRCC3-202ENST00000340647 PRLRP16471 622 aa17.36■□□□□ 0.37
BRCC3-202ENST00000340647 SEL1L3Q68CR1 1132 aa17.36■□□□□ 0.37
BRCC3-202ENST00000340647 SCYL2Q6P3W7 929 aa17.36■□□□□ 0.37
BRCC3-202ENST00000340647 LRSAM1Q6UWE0 723 aa17.36■□□□□ 0.37
BRCC3-202ENST00000340647 TMC6Q7Z403 805 aa17.36■□□□□ 0.37
BRCC3-202ENST00000340647 ADAT2Q7Z6V5 191 aaKnown RBP17.36■□□□□ 0.37
BRCC3-202ENST00000340647 PRPF39Q86UA1 669 aaKnown RBP17.36■□□□□ 0.37
BRCC3-202ENST00000340647 PLPP6Q8IY26 295 aa17.36■□□□□ 0.37
BRCC3-202ENST00000340647 OR6K2Q8NGY2 324 aa17.36■□□□□ 0.37
BRCC3-202ENST00000340647 HEPHQ9BQS7 1158 aa17.36■□□□□ 0.37
BRCC3-202ENST00000340647 FZD3Q9NPG1 666 aa17.36■□□□□ 0.37
BRCC3-202ENST00000340647 PCDHB9Q9Y5E1 797 aa17.36■□□□□ 0.37
BRCC3-202ENST00000340647 SRRM3A6NNA2 597 aaPredicted RBP17.35■□□□□ 0.37
BRCC3-202ENST00000340647 RAMP2O60895 175 aa17.35■□□□□ 0.37
BRCC3-202ENST00000340647 TRIM16O95361 564 aa17.35■□□□□ 0.37
BRCC3-202ENST00000340647 FTLP02792 175 aaPredicted RBP17.35■□□□□ 0.37
BRCC3-202ENST00000340647 GZMAP12544 262 aa17.35■□□□□ 0.37
BRCC3-202ENST00000340647 EPHB2P29323 1055 aa17.35■□□□□ 0.37
BRCC3-202ENST00000340647 ABL2P42684 1182 aa17.35■□□□□ 0.37
BRCC3-202ENST00000340647 RXRGP48443 463 aa17.35■□□□□ 0.37
BRCC3-202ENST00000340647 C21orf59P57076 290 aa17.35■□□□□ 0.37
BRCC3-202ENST00000340647 POLD3Q15054 466 aaPredicted RBP17.35■□□□□ 0.37
BRCC3-202ENST00000340647 ASIC2Q16515 512 aa17.35■□□□□ 0.37
BRCC3-202ENST00000340647 FIGNQ5HY92 759 aa17.35■□□□□ 0.37
BRCC3-202ENST00000340647 NEK5Q6P3R8 708 aa17.35■□□□□ 0.37
BRCC3-202ENST00000340647 PARS2Q7L3T8 475 aaKnown RBP17.35■□□□□ 0.37
BRCC3-202ENST00000340647 HORMAD1Q86X24 394 aa17.35■□□□□ 0.37
BRCC3-202ENST00000340647 MARCH9Q86YJ5 346 aa17.35■□□□□ 0.37
BRCC3-202ENST00000340647 HMCESQ96FZ2 354 aa17.35■□□□□ 0.37
BRCC3-202ENST00000340647 ERVMER34-1Q9H9K5 563 aa17.35■□□□□ 0.37
BRCC3-202ENST00000340647 GGT7Q9UJ14 662 aa17.35■□□□□ 0.37
BRCC3-202ENST00000340647 TPX2Q9ULW0 747 aaKnown RBP17.35■□□□□ 0.37
BRCC3-202ENST00000340647 DMTF1Q9Y222 760 aa17.35■□□□□ 0.37
BRCC3-202ENST00000340647 FADS3Q9Y5Q0 445 aa17.35■□□□□ 0.37
BRCC3-202ENST00000340647 KNTC1P50748 2209 aa17.35■□□□□ 0.37
BRCC3-202ENST00000340647 RAD51BO15315 384 aa17.34■□□□□ 0.37
BRCC3-202ENST00000340647 SLC31A1O15431 190 aa17.34■□□□□ 0.37
BRCC3-202ENST00000340647 CCDC172P0C7W6 258 aa17.34■□□□□ 0.37
BRCC3-202ENST00000340647 ADRB3P13945 408 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms