RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 ZNF423Q2M1K9 1284 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 CARD16Q5EG05 197 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 EFHC2Q5JST6 749 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 AGBL4Q5VU57 503 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 E4F1Q66K89 784 aaPredicted RBP10.74□□□□□ -0.69
CCDC9-203ENST00000596938 SCYL2Q6P3W7 929 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 C22orf39Q6P5X5 142 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 TMC6Q7Z403 805 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 GLRX5Q86SX6 157 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 PRPF39Q86UA1 669 aaKnown RBP10.74□□□□□ -0.69
CCDC9-203ENST00000596938 TRIM69Q86WT6 500 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 PYROXD2Q8N2H3 581 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 PCDH20Q8N6Y1 951 aaKnown RBP10.74□□□□□ -0.69
CCDC9-203ENST00000596938 ARHGEF2Q92974 986 aaKnown RBP10.74□□□□□ -0.69
CCDC9-203ENST00000596938 IQCDQ96DY2 449 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 CNTNAP3BQ96NU0 1288 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 HDAC8Q9BY41 377 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 CNTNAP3Q9BZ76 1288 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 PREBQ9HCU5 417 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 DONSONQ9NYP3 566 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 ARHGAP20Q9P2F6 1191 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 DNAI1Q9UI46 699 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 FZD10Q9ULW2 581 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 HPCAL4Q9UM19 191 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 FNDC3AQ9Y2H6 1198 aaKnown RBP10.74□□□□□ -0.69
CCDC9-203ENST00000596938 A0A1W2PR77 199 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 WASH4PA8MWX3 477 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 TMCO5BA8MYB1 307 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 EIF3CLB5ME19 914 aaKnown RBP10.73□□□□□ -0.69
CCDC9-203ENST00000596938 PLK4O00444 970 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 KPNA3O00505 521 aaPredicted RBP10.73□□□□□ -0.69
CCDC9-203ENST00000596938 KDELR3O43731 214 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 PCDHGA12O60330 932 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 RAMP2O60895 175 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 CBFA2T3O75081 653 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 TRIM16O95361 564 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 CD38P28907 300 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 EPHB2P29323 1055 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 C21orf59P57076 290 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 YBEYP58557 167 aaPredicted RBP10.73□□□□□ -0.69
CCDC9-203ENST00000596938 TAS2R38P59533 333 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 OGDHQ02218 1023 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 OVGP1Q12889 678 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 POLD3Q15054 466 aaPredicted RBP10.73□□□□□ -0.69
CCDC9-203ENST00000596938 ARSIQ5FYB1 569 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 KCNT1Q5JUK3 1230 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 PIP5KL1Q5T9C9 394 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 DPY19L3Q6ZPD9 716 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 ERN2Q76MJ5 926 aaKnown RBP10.73□□□□□ -0.69
CCDC9-203ENST00000596938 ADAT2Q7Z6V5 191 aaKnown RBP10.73□□□□□ -0.69
CCDC9-203ENST00000596938 NAXDQ8IW45 347 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 RTL3Q8N8U3 475 aaKnown RBP10.73□□□□□ -0.69
CCDC9-203ENST00000596938 MFSD2AQ8NA29 543 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 CHST14Q8NCH0 376 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 FNIP1Q8TF40 1166 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 SERAC1Q96JX3 654 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 SLC6A18Q96N87 628 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 CAMK1GQ96NX5 476 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 EIF3CQ99613 913 aaKnown RBP10.73□□□□□ -0.69
CCDC9-203ENST00000596938 EPAS1Q99814 870 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 HEPHQ9BQS7 1158 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 ISCUQ9H1K1 167 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 TNKS2Q9H2K2 1166 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 IL36AQ9UHA7 158 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 PCOLCE2Q9UKZ9 415 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 PCDHB9Q9Y5E1 797 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 PCDH15Q96QU1 1955 aa10.73□□□□□ -0.69
CCDC9-203ENST00000596938 SPAARA0A1B0GVQ0 90 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 ZSCAN5CA6NGD5 496 aaPredicted RBP10.72□□□□□ -0.69
CCDC9-203ENST00000596938 H0Y8X5 98 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 GOLGA6L19H0YKK7 550 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 TLR4O00206 839 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 KCNK3O14649 394 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 WNT9AO14904 365 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 FLRT2O43155 660 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 RNGTTO60942 597 aaKnown RBP10.72□□□□□ -0.69
CCDC9-203ENST00000596938 LEFTY1O75610 366 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 WNT1P04628 370 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 MYBL1P10243 752 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 SKILP12757 684 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 PSMA2P25787 234 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 DNA2P51530 1060 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 PPP2CBP62714 309 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 PPP2CAP67775 309 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 FAM193AP78312 1265 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 ZBED6P86452 979 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 ACAP1Q15027 740 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 ZSCAN23Q3MJ62 389 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 POM121L1PQ3SYA9 428 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 INO80DQ53TQ3 878 aaPredicted RBP10.72□□□□□ -0.69
CCDC9-203ENST00000596938 SLC45A4Q5BKX6 768 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 ERMARDQ5T6L9 678 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 HGSNATQ68CP4 663 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 NAPEPLDQ6IQ20 393 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 IQCHQ86VS3 1027 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 UMODL1-AS1Q8N2C9 162 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 ARFGAP1Q8N6T3 406 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 SETD7Q8WTS6 366 aaKnown RBP10.72□□□□□ -0.69
CCDC9-203ENST00000596938 CASKIN2Q8WXE0 1202 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 ARRDC3Q96B67 414 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms