RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 FAM160A2Q8N612 972 aaPredicted RBP26.25■■□□□ 1.79
TRIM28-204ENST00000594806 DESI2Q9BSY9 194 aa26.25■■□□□ 1.79
TRIM28-204ENST00000594806 WSB2Q9NYS7 404 aaPredicted RBP26.25■■□□□ 1.79
TRIM28-204ENST00000594806 MBD1Q9UIS9 605 aaPredicted RBP26.25■■□□□ 1.79
TRIM28-204ENST00000594806 GMEB2Q9UKD1 530 aa26.25■■□□□ 1.79
TRIM28-204ENST00000594806 PPM1HQ9ULR3 514 aa26.25■■□□□ 1.79
TRIM28-204ENST00000594806 ADGRG1Q9Y653 693 aa26.25■■□□□ 1.79
TRIM28-204ENST00000594806 DUSP10Q9Y6W6 482 aa26.25■■□□□ 1.79
TRIM28-204ENST00000594806 CEP192Q8TEP8 1941 aa26.24■■□□□ 1.79
TRIM28-204ENST00000594806 LRRD1A4D1F6 860 aa26.24■■□□□ 1.79
TRIM28-204ENST00000594806 NDUFS2O75306 463 aa26.24■■□□□ 1.79
TRIM28-204ENST00000594806 ZNF821O75541 412 aaPredicted RBP26.24■■□□□ 1.79
TRIM28-204ENST00000594806 GSRP00390 522 aa26.24■■□□□ 1.79
TRIM28-204ENST00000594806 SLC8A1P32418 973 aa26.24■■□□□ 1.79
TRIM28-204ENST00000594806 SNRPD1P62314 119 aaKnown RBP26.24■■□□□ 1.79
TRIM28-204ENST00000594806 IL10RBQ08334 325 aa26.24■■□□□ 1.79
TRIM28-204ENST00000594806 MMRN1Q13201 1228 aa26.24■■□□□ 1.79
TRIM28-204ENST00000594806 PAFAH1B3Q15102 231 aaKnown RBP26.24■■□□□ 1.79
TRIM28-204ENST00000594806 CARD16Q5EG05 197 aa26.24■■□□□ 1.79
TRIM28-204ENST00000594806 TMIEQ8NEW7 156 aa26.24■■□□□ 1.79
TRIM28-204ENST00000594806 PCDH19Q8TAB3 1148 aa26.24■■□□□ 1.79
TRIM28-204ENST00000594806 KIAA1524Q8TCG1 905 aa26.24■■□□□ 1.79
TRIM28-204ENST00000594806 UBE2Q2Q8WVN8 375 aa26.24■■□□□ 1.79
TRIM28-204ENST00000594806 RAPGEF5Q92565 580 aa26.24■■□□□ 1.79
TRIM28-204ENST00000594806 PCED1AQ9H1Q7 454 aa26.24■■□□□ 1.79
TRIM28-204ENST00000594806 PDFQ9HBH1 243 aa26.24■■□□□ 1.79
TRIM28-204ENST00000594806 ETNK2Q9NVF9 386 aa26.24■■□□□ 1.79
TRIM28-204ENST00000594806 KLHL11Q9NVR0 708 aa26.24■■□□□ 1.79
TRIM28-204ENST00000594806 UBA2Q9UBT2 640 aaPredicted RBP26.24■■□□□ 1.79
TRIM28-204ENST00000594806 FCF1Q9Y324 198 aaKnown RBP26.24■■□□□ 1.79
TRIM28-204ENST00000594806 DFFAO00273 331 aa26.23■■□□□ 1.79
TRIM28-204ENST00000594806 IL1BP01584 269 aa26.23■■□□□ 1.79
TRIM28-204ENST00000594806 PRNPP04156 253 aa26.23■■□□□ 1.79
TRIM28-204ENST00000594806 RETP07949 1114 aa26.23■■□□□ 1.79
TRIM28-204ENST00000594806 BCKDHBP21953 392 aa26.23■■□□□ 1.79
TRIM28-204ENST00000594806 CHRNA3P32297 505 aa26.23■■□□□ 1.79
TRIM28-204ENST00000594806 CCDC15Q0P6D6 951 aa26.23■■□□□ 1.79
TRIM28-204ENST00000594806 RFTN1Q14699 578 aaPredicted RBP26.23■■□□□ 1.79
TRIM28-204ENST00000594806 TMCO4Q5TGY1 634 aa26.23■■□□□ 1.79
TRIM28-204ENST00000594806 RNF10Q8N5U6 811 aaKnown RBP26.23■■□□□ 1.79
TRIM28-204ENST00000594806 RUBCNQ92622 972 aa26.23■■□□□ 1.79
TRIM28-204ENST00000594806 LRIG1Q96JA1 1093 aa26.23■■□□□ 1.79
TRIM28-204ENST00000594806 ZNF599Q96NL3 588 aa26.23■■□□□ 1.79
TRIM28-204ENST00000594806 RNF157Q96PX1 679 aa26.23■■□□□ 1.79
TRIM28-204ENST00000594806 SP110Q9HB58 689 aa26.23■■□□□ 1.79
TRIM28-204ENST00000594806 SGK2Q9HBY8 427 aa26.23■■□□□ 1.79
TRIM28-204ENST00000594806 IPO11Q9UI26 975 aaKnown RBP26.23■■□□□ 1.79
TRIM28-204ENST00000594806 FZD4Q9ULV1 537 aa26.23■■□□□ 1.79
TRIM28-204ENST00000594806 HYOU1Q9Y4L1 999 aa26.23■■□□□ 1.79
TRIM28-204ENST00000594806 PCDHGA5Q9Y5G8 931 aa26.23■■□□□ 1.79
TRIM28-204ENST00000594806 SDK1Q7Z5N4 2213 aa26.23■■□□□ 1.79
TRIM28-204ENST00000594806 KRT1P04264 644 aa26.22■■□□□ 1.79
TRIM28-204ENST00000594806 DPP6P42658 865 aa26.22■■□□□ 1.79
TRIM28-204ENST00000594806 RPL6Q02878 288 aaKnown RBP26.22■■□□□ 1.79
TRIM28-204ENST00000594806 ASCL5Q7RTU5 278 aa26.22■■□□□ 1.79
TRIM28-204ENST00000594806 SYCE1Q8N0S2 351 aa26.22■■□□□ 1.79
TRIM28-204ENST00000594806 CADM4Q8NFZ8 388 aa26.22■■□□□ 1.79
TRIM28-204ENST00000594806 OR2AP1Q8NGE2 309 aa26.22■■□□□ 1.79
TRIM28-204ENST00000594806 TOE1Q96GM8 510 aaKnown RBP26.22■■□□□ 1.79
TRIM28-204ENST00000594806 OMDQ99983 421 aa26.22■■□□□ 1.79
TRIM28-204ENST00000594806 HEPHQ9BQS7 1158 aa26.22■■□□□ 1.79
TRIM28-204ENST00000594806 MAK16Q9BXY0 300 aaKnown RBP26.22■■□□□ 1.79
TRIM28-204ENST00000594806 FBXL12Q9NXK8 326 aa26.22■■□□□ 1.79
TRIM28-204ENST00000594806 C3orf70A6NLC5 250 aaPredicted RBP26.21■■□□□ 1.79
TRIM28-204ENST00000594806 MID1O15344 667 aa26.21■■□□□ 1.79
TRIM28-204ENST00000594806 KRT86O43790 486 aa26.21■■□□□ 1.79
TRIM28-204ENST00000594806 BNIP3LO60238 219 aa26.21■■□□□ 1.79
TRIM28-204ENST00000594806 GFRA3O60609 400 aa26.21■■□□□ 1.79
TRIM28-204ENST00000594806 TMCC1O94876 653 aa26.21■■□□□ 1.79
TRIM28-204ENST00000594806 ZFXP17010 805 aaPredicted RBP26.21■■□□□ 1.79
TRIM28-204ENST00000594806 PSMD8P48556 350 aa26.21■■□□□ 1.79
TRIM28-204ENST00000594806 DNA2P51530 1060 aa26.21■■□□□ 1.79
TRIM28-204ENST00000594806 NCBP2-AS2Q69YL0 99 aa26.21■■□□□ 1.79
TRIM28-204ENST00000594806 DPY19L3Q6ZPD9 716 aa26.21■■□□□ 1.79
TRIM28-204ENST00000594806 CACUL1Q86Y37 369 aa26.21■■□□□ 1.79
TRIM28-204ENST00000594806 KATNAL2Q8IYT4 538 aa26.21■■□□□ 1.79
TRIM28-204ENST00000594806 FRMD1Q8N878 549 aa26.21■■□□□ 1.79
TRIM28-204ENST00000594806 PIP4K2CQ8TBX8 421 aa26.21■■□□□ 1.79
TRIM28-204ENST00000594806 FOXJ1Q92949 421 aa26.21■■□□□ 1.79
TRIM28-204ENST00000594806 BTBD1Q9H0C5 482 aa26.21■■□□□ 1.79
TRIM28-204ENST00000594806 TNKS2Q9H2K2 1166 aa26.21■■□□□ 1.79
TRIM28-204ENST00000594806 NCDNQ9UBB6 729 aa26.21■■□□□ 1.79
TRIM28-204ENST00000594806 IL36AQ9UHA7 158 aa26.21■■□□□ 1.79
TRIM28-204ENST00000594806 ACTL7AQ9Y615 435 aa26.21■■□□□ 1.79
TRIM28-204ENST00000594806 OTOGLQ3ZCN5 2332 aa26.21■■□□□ 1.79
TRIM28-204ENST00000594806 J3KR12 359 aa26.2■■□□□ 1.78
TRIM28-204ENST00000594806 LRP3O75074 770 aa26.2■■□□□ 1.78
TRIM28-204ENST00000594806 EPN2O95208 641 aa26.2■■□□□ 1.78
TRIM28-204ENST00000594806 POP4O95707 220 aaKnown RBP26.2■■□□□ 1.78
TRIM28-204ENST00000594806 CCDC175P0C221 793 aa26.2■■□□□ 1.78
TRIM28-204ENST00000594806 TNNT1P13805 278 aa26.2■■□□□ 1.78
TRIM28-204ENST00000594806 CCZ1BP86790 482 aa26.2■■□□□ 1.78
TRIM28-204ENST00000594806 CCZ1P86791 482 aaPredicted RBP26.2■■□□□ 1.78
TRIM28-204ENST00000594806 RAD51Q06609 339 aa26.2■■□□□ 1.78
TRIM28-204ENST00000594806 LPAL2Q16609 132 aa26.2■■□□□ 1.78
TRIM28-204ENST00000594806 ZNF662Q6ZS27 426 aa26.2■■□□□ 1.78
TRIM28-204ENST00000594806 RCOR2Q8IZ40 523 aa26.2■■□□□ 1.78
TRIM28-204ENST00000594806 ATPAF2Q8N5M1 289 aa26.2■■□□□ 1.78
TRIM28-204ENST00000594806 PQLC3Q8N755 202 aa26.2■■□□□ 1.78
TRIM28-204ENST00000594806 TRAF3IP1Q8TDR0 691 aaPredicted RBP26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms