RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 ACACAQ13085 2346 aa17.98■□□□□ 0.47
SHKBP1-203ENST00000594298 SYNJ2BP-COX16A0A087WUM0 186 aa17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 A0A1W2PQJ5 194 aa17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 PRAMEF26H0Y7S4 382 aa17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 RNGTTO60942 597 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 CLDN11O75508 207 aa17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 CALB1P05937 261 aa17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 UNGP13051 313 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 MMP8P22894 467 aa17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 MAT2AP31153 395 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 ABCG1P45844 678 aa17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 CLDN6P56747 220 aa17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 RNASE9P60153 205 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 CNTN1Q12860 1018 aa17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 TARDBPQ13148 414 aaKnown RBP eCLIP17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 STAT4Q14765 748 aa17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 CLEC16AQ2KHT3 1053 aa17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 SETMARQ53H47 684 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 Q6ZVU0 165 aa17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 ARCQ7LC44 396 aa17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 SH2D3CQ8N5H7 860 aa17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 PIP4K2CQ8TBX8 421 aa17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 RFFLQ8WZ73 363 aa17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 COX16Q9P0S2 106 aa17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 VPS28Q9UK41 221 aa17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 VANGL2Q9ULK5 521 aa17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 HS3ST2Q9Y278 367 aa17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 PAXBP1Q9Y5B6 917 aa17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.97■□□□□ 0.47
SHKBP1-203ENST00000594298 GOLGA8SH3BPF8 625 aa17.96■□□□□ 0.47
SHKBP1-203ENST00000594298 F9P00740 461 aa17.96■□□□□ 0.47
SHKBP1-203ENST00000594298 ACP1P24666 158 aa17.96■□□□□ 0.47
SHKBP1-203ENST00000594298 PBX1P40424 430 aa17.96■□□□□ 0.47
SHKBP1-203ENST00000594298 EIF2S3P41091 472 aaKnown RBP17.96■□□□□ 0.47
SHKBP1-203ENST00000594298 IRAK1P51617 712 aa17.96■□□□□ 0.47
SHKBP1-203ENST00000594298 CDH4P55283 916 aa17.96■□□□□ 0.47
SHKBP1-203ENST00000594298 TAS2R38P59533 333 aa17.96■□□□□ 0.47
SHKBP1-203ENST00000594298 NEK5Q6P3R8 708 aa17.96■□□□□ 0.47
SHKBP1-203ENST00000594298 PHF13Q86YI8 300 aaPredicted RBP17.96■□□□□ 0.47
SHKBP1-203ENST00000594298 TMEM145Q8NBT3 493 aa17.96■□□□□ 0.47
SHKBP1-203ENST00000594298 RNF214Q8ND24 703 aa17.96■□□□□ 0.47
SHKBP1-203ENST00000594298 PCDHB18PQ96TA0 734 aa17.96■□□□□ 0.47
SHKBP1-203ENST00000594298 TTYH3Q9C0H2 523 aa17.96■□□□□ 0.47
SHKBP1-203ENST00000594298 ADAM22Q9P0K1 906 aa17.96■□□□□ 0.47
SHKBP1-203ENST00000594298 NYNRINQ9P2P1 1898 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-203ENST00000594298 PAGE1O75459 146 aa17.95■□□□□ 0.46
SHKBP1-203ENST00000594298 PRKCIP41743 596 aa17.95■□□□□ 0.46
SHKBP1-203ENST00000594298 KLHL30Q0D2K2 578 aa17.95■□□□□ 0.46
SHKBP1-203ENST00000594298 NME3Q13232 169 aa17.95■□□□□ 0.46
SHKBP1-203ENST00000594298 PROX2Q3B8N5 592 aa17.95■□□□□ 0.46
SHKBP1-203ENST00000594298 PIP5KL1Q5T9C9 394 aa17.95■□□□□ 0.46
SHKBP1-203ENST00000594298 SLC30A5Q8TAD4 765 aa17.95■□□□□ 0.46
SHKBP1-203ENST00000594298 SYN2Q92777 582 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-203ENST00000594298 KLHDC7BQ96G42 594 aa17.95■□□□□ 0.46
SHKBP1-203ENST00000594298 CRELD1Q96HD1 420 aa17.95■□□□□ 0.46
SHKBP1-203ENST00000594298 DCBLD2Q96PD2 775 aa17.95■□□□□ 0.46
SHKBP1-203ENST00000594298 C11orf70Q9BRQ4 267 aa17.95■□□□□ 0.46
SHKBP1-203ENST00000594298 XPO4Q9C0E2 1151 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-203ENST00000594298 ARHGEF38Q9NXL2 777 aa17.95■□□□□ 0.46
SHKBP1-203ENST00000594298 CAPN11Q9UMQ6 739 aa17.95■□□□□ 0.46
SHKBP1-203ENST00000594298 LUC7L2Q9Y383 392 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-203ENST00000594298 BZW2Q9Y6E2 419 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-203ENST00000594298 M0QYT0 321 aa17.94■□□□□ 0.46
SHKBP1-203ENST00000594298 TLX3O43711 291 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-203ENST00000594298 SRCP12931 536 aa17.94■□□□□ 0.46
SHKBP1-203ENST00000594298 KRT83P78385 493 aa17.94■□□□□ 0.46
SHKBP1-203ENST00000594298 ZBED6P86452 979 aa17.94■□□□□ 0.46
SHKBP1-203ENST00000594298 C1QBPQ07021 282 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-203ENST00000594298 CCDC15Q0P6D6 951 aa17.94■□□□□ 0.46
SHKBP1-203ENST00000594298 ZNF211Q13398 564 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-203ENST00000594298 SLC25A52Q3SY17 297 aa17.94■□□□□ 0.46
SHKBP1-203ENST00000594298 POM121L1PQ3SYA9 428 aa17.94■□□□□ 0.46
SHKBP1-203ENST00000594298 BRMS1LQ5PSV4 323 aa17.94■□□□□ 0.46
SHKBP1-203ENST00000594298 OTUD1Q5VV17 481 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-203ENST00000594298 ACAD10Q6JQN1 1059 aa17.94■□□□□ 0.46
SHKBP1-203ENST00000594298 C14orf80Q86SX3 495 aa17.94■□□□□ 0.46
SHKBP1-203ENST00000594298 TMIEQ8NEW7 156 aa17.94■□□□□ 0.46
SHKBP1-203ENST00000594298 SNIP1Q8TAD8 396 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-203ENST00000594298 CCDC114Q96M63 670 aa17.94■□□□□ 0.46
SHKBP1-203ENST00000594298 UBL7Q96S82 380 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-203ENST00000594298 PSMB7Q99436 277 aa17.94■□□□□ 0.46
SHKBP1-203ENST00000594298 NPY6RQ99463 290 aa17.94■□□□□ 0.46
SHKBP1-203ENST00000594298 C2orf49Q9BVC5 232 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-203ENST00000594298 MUC3BQ9H195 1237 aa17.94■□□□□ 0.46
SHKBP1-203ENST00000594298 FARP1Q9Y4F1 1045 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-203ENST00000594298 AK5Q9Y6K8 562 aa17.94■□□□□ 0.46
SHKBP1-203ENST00000594298 URB1O60287 2271 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-203ENST00000594298 TP53BP1Q12888 1972 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 MT-CO1P00395 513 aa17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 CTSLP07711 333 aa17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 GGCXP38435 758 aa17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 CXCR3P49682 368 aa17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 SULT1E1P49888 294 aa17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 CLCN6P51797 869 aa17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 GSCP56915 257 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 INSM1Q01101 510 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 SEMG2Q02383 582 aa17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 TRIM14Q14142 442 aa17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 C2CD6Q53TS8 623 aa17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 ACBD5Q5T8D3 534 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms