RNA–Protein interactions for RNA: ENST00000593049.5

DNMT1-229, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-229ENST00000593049 CA9Q16790 459 aa16.75■□□□□ 0.27
DNMT1-229ENST00000593049 INO80DQ53TQ3 878 aaPredicted RBP16.75■□□□□ 0.27
DNMT1-229ENST00000593049 DCAF12L1Q5VU92 463 aa16.75■□□□□ 0.27
DNMT1-229ENST00000593049 SLC23A3Q6PIS1 610 aa16.75■□□□□ 0.27
DNMT1-229ENST00000593049 HDDC3Q8N4P3 179 aa16.75■□□□□ 0.27
DNMT1-229ENST00000593049 OR2A12Q8NGT7 310 aa16.75■□□□□ 0.27
DNMT1-229ENST00000593049 PIP4K2CQ8TBX8 421 aa16.75■□□□□ 0.27
DNMT1-229ENST00000593049 BTBD6Q96KE9 485 aa16.75■□□□□ 0.27
DNMT1-229ENST00000593049 NOL6Q9H6R4 1146 aaKnown RBP16.75■□□□□ 0.27
DNMT1-229ENST00000593049 DYRK4Q9NR20 520 aa16.75■□□□□ 0.27
DNMT1-229ENST00000593049 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.75■□□□□ 0.27
DNMT1-229ENST00000593049 SPTLC3Q9NUV7 552 aa16.75■□□□□ 0.27
DNMT1-229ENST00000593049 IL36AQ9UHA7 158 aa16.75■□□□□ 0.27
DNMT1-229ENST00000593049 PPM1HQ9ULR3 514 aa16.75■□□□□ 0.27
DNMT1-229ENST00000593049 CFAP54Q96N23 3096 aa16.75■□□□□ 0.27
DNMT1-229ENST00000593049 K7ERQ8 282 aa16.74■□□□□ 0.27
DNMT1-229ENST00000593049 RARAP10276 462 aa16.74■□□□□ 0.27
DNMT1-229ENST00000593049 ERCC2P18074 760 aa16.74■□□□□ 0.27
DNMT1-229ENST00000593049 IL1R2P27930 398 aa16.74■□□□□ 0.27
DNMT1-229ENST00000593049 CYLC1P35663 651 aaPredicted RBP16.74■□□□□ 0.27
DNMT1-229ENST00000593049 SSR1P43307 286 aaKnown RBP16.74■□□□□ 0.27
DNMT1-229ENST00000593049 LIMK1P53667 647 aa16.74■□□□□ 0.27
DNMT1-229ENST00000593049 SNRPD1P62314 119 aaKnown RBP16.74■□□□□ 0.27
DNMT1-229ENST00000593049 SLC25A11Q02978 314 aaKnown RBP16.74■□□□□ 0.27
DNMT1-229ENST00000593049 DPYSQ14117 519 aa16.74■□□□□ 0.27
DNMT1-229ENST00000593049 SMTNL2Q2TAL5 461 aa16.74■□□□□ 0.27
DNMT1-229ENST00000593049 TRIM61Q5EBN2 209 aa16.74■□□□□ 0.27
DNMT1-229ENST00000593049 CARD16Q5EG05 197 aa16.74■□□□□ 0.27
DNMT1-229ENST00000593049 OR2T34Q8NGX1 318 aa16.74■□□□□ 0.27
DNMT1-229ENST00000593049 RFFLQ8WZ73 363 aa16.74■□□□□ 0.27
DNMT1-229ENST00000593049 HSPH1Q92598 858 aa16.74■□□□□ 0.27
DNMT1-229ENST00000593049 HMCESQ96FZ2 354 aa16.74■□□□□ 0.27
DNMT1-229ENST00000593049 PPP1R16AQ96I34 528 aa16.74■□□□□ 0.27
DNMT1-229ENST00000593049 PACSIN1Q9BY11 444 aa16.74■□□□□ 0.27
DNMT1-229ENST00000593049 NEUROG2Q9H2A3 272 aa16.74■□□□□ 0.27
DNMT1-229ENST00000593049 LRRC19Q9H756 370 aa16.74■□□□□ 0.27
DNMT1-229ENST00000593049 CWC15Q9P013 229 aaKnown RBP16.74■□□□□ 0.27
DNMT1-229ENST00000593049 RCOR3Q9P2K3 495 aaPredicted RBP16.74■□□□□ 0.27
DNMT1-229ENST00000593049 A0A1B0GTW7 788 aa16.73■□□□□ 0.27
DNMT1-229ENST00000593049 BUB1O43683 1085 aa16.73■□□□□ 0.27
DNMT1-229ENST00000593049 MTA2O94776 668 aa16.73■□□□□ 0.27
DNMT1-229ENST00000593049 CD160O95971 181 aa16.73■□□□□ 0.27
DNMT1-229ENST00000593049 GSRP00390 522 aa16.73■□□□□ 0.27
DNMT1-229ENST00000593049 SERPINF2P08697 491 aa16.73■□□□□ 0.27
DNMT1-229ENST00000593049 KRT7P08729 469 aa16.73■□□□□ 0.27
DNMT1-229ENST00000593049 ID4P47928 161 aa16.73■□□□□ 0.27
DNMT1-229ENST00000593049 DNA2P51530 1060 aa16.73■□□□□ 0.27
DNMT1-229ENST00000593049 KRT81Q14533 505 aa16.73■□□□□ 0.27
DNMT1-229ENST00000593049 SPA17Q15506 151 aa16.73■□□□□ 0.27
DNMT1-229ENST00000593049 KCNT1Q5JUK3 1230 aa16.73■□□□□ 0.27
DNMT1-229ENST00000593049 POLNQ7Z5Q5 900 aa16.73■□□□□ 0.27
DNMT1-229ENST00000593049 AADATQ8N5Z0 425 aa16.73■□□□□ 0.27
DNMT1-229ENST00000593049 OR14C36Q8NHC7 312 aa16.73■□□□□ 0.27
DNMT1-229ENST00000593049 SLC35G2Q8TBE7 412 aa16.73■□□□□ 0.27
DNMT1-229ENST00000593049 LRIG1Q96JA1 1093 aa16.73■□□□□ 0.27
DNMT1-229ENST00000593049 HEPHQ9BQS7 1158 aa16.73■□□□□ 0.27
DNMT1-229ENST00000593049 TNKS2Q9H2K2 1166 aa16.73■□□□□ 0.27
DNMT1-229ENST00000593049 C6orf106Q9H6K1 298 aaPredicted RBP16.73■□□□□ 0.27
DNMT1-229ENST00000593049 TMEM74BQ9NUR3 256 aa16.73■□□□□ 0.27
DNMT1-229ENST00000593049 SERGEFQ9UGK8 458 aa16.73■□□□□ 0.27
DNMT1-229ENST00000593049 SLC6A14Q9UN76 642 aa16.73■□□□□ 0.27
DNMT1-229ENST00000593049 FCF1Q9Y324 198 aaKnown RBP16.73■□□□□ 0.27
DNMT1-229ENST00000593049 ATXN2Q99700 1313 aaKnown RBP16.72■□□□□ 0.27
DNMT1-229ENST00000593049 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.72■□□□□ 0.27
DNMT1-229ENST00000593049 ZNF821O75541 412 aaPredicted RBP16.72■□□□□ 0.27
DNMT1-229ENST00000593049 CFIP05156 583 aa16.72■□□□□ 0.27
DNMT1-229ENST00000593049 SYPP08247 313 aa16.72■□□□□ 0.27
DNMT1-229ENST00000593049 CDC25BP30305 580 aa16.72■□□□□ 0.27
DNMT1-229ENST00000593049 SERPINB6P35237 376 aa16.72■□□□□ 0.27
DNMT1-229ENST00000593049 DRD3P35462 400 aa16.72■□□□□ 0.27
DNMT1-229ENST00000593049 CCNHP51946 323 aaPredicted RBP16.72■□□□□ 0.27
DNMT1-229ENST00000593049 RAD51Q06609 339 aa16.72■□□□□ 0.27
DNMT1-229ENST00000593049 PUM1Q14671 1186 aaKnown RBP eCLIP16.72■□□□□ 0.274e-6■□□□□ 8.5
DNMT1-229ENST00000593049 TCEAL1Q15170 157 aa16.72■□□□□ 0.27
DNMT1-229ENST00000593049 RSPO4Q2I0M5 234 aaPredicted RBP16.72■□□□□ 0.27
DNMT1-229ENST00000593049 DAB2IPQ5VWQ8 1189 aa16.72■□□□□ 0.27
DNMT1-229ENST00000593049 KIAA0895LQ68EN5 471 aa16.72■□□□□ 0.27
DNMT1-229ENST00000593049 TMCO3Q6UWJ1 677 aa16.72■□□□□ 0.27
DNMT1-229ENST00000593049 DPY19L3Q6ZPD9 716 aa16.72■□□□□ 0.27
DNMT1-229ENST00000593049 TMTC1Q8IUR5 882 aa16.72■□□□□ 0.27
DNMT1-229ENST00000593049 MAP7D3Q8IWC1 876 aa16.72■□□□□ 0.27
DNMT1-229ENST00000593049 OR2AP1Q8NGE2 309 aa16.72■□□□□ 0.27
DNMT1-229ENST00000593049 SNX19Q92543 992 aa16.72■□□□□ 0.27
DNMT1-229ENST00000593049 FAM131CQ96AQ9 280 aa16.72■□□□□ 0.27
DNMT1-229ENST00000593049 CSPG4P5Q96PW8 444 aa16.72■□□□□ 0.27
DNMT1-229ENST00000593049 RTKNQ9BST9 563 aa16.72■□□□□ 0.27
DNMT1-229ENST00000593049 EDEM2Q9BV94 578 aa16.72■□□□□ 0.27
DNMT1-229ENST00000593049 SMOC1Q9H4F8 434 aa16.72■□□□□ 0.27
DNMT1-229ENST00000593049 OSGEPQ9NPF4 335 aa16.72■□□□□ 0.27
DNMT1-229ENST00000593049 IMPACTQ9P2X3 320 aa16.72■□□□□ 0.27
DNMT1-229ENST00000593049 UBA2Q9UBT2 640 aaPredicted RBP16.72■□□□□ 0.27
DNMT1-229ENST00000593049 SARDHQ9UL12 918 aa16.72■□□□□ 0.27
DNMT1-229ENST00000593049 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.72■□□□□ 0.27
DNMT1-229ENST00000593049 PI4KAP42356 2102 aa16.72■□□□□ 0.27
DNMT1-229ENST00000593049 LNP1A1A4G5 178 aa16.71■□□□□ 0.27
DNMT1-229ENST00000593049 GOLGA6L6A8MZA4 724 aa16.71■□□□□ 0.27
DNMT1-229ENST00000593049 KPNA3O00505 521 aaPredicted RBP16.71■□□□□ 0.27
DNMT1-229ENST00000593049 BCAT2O15382 392 aaPredicted RBP16.71■□□□□ 0.27
DNMT1-229ENST00000593049 PRAMEF11O60813 436 aa16.71■□□□□ 0.27
DNMT1-229ENST00000593049 IPO7O95373 1038 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms