RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 MAP7D1Q3KQU3 841 aa12.86□□□□□ -0.35
RETREG3-203ENST00000585894 ATXN7L2Q5T6C5 722 aaPredicted RBP12.86□□□□□ -0.35
RETREG3-203ENST00000585894 AADACL2Q6P093 401 aa12.86□□□□□ -0.35
RETREG3-203ENST00000585894 NPNTQ6UXI9 565 aa12.86□□□□□ -0.35
RETREG3-203ENST00000585894 NT5DC3Q86UY8 548 aa12.86□□□□□ -0.35
RETREG3-203ENST00000585894 DEFB119Q8N690 84 aa12.86□□□□□ -0.35
RETREG3-203ENST00000585894 OR2A12Q8NGT7 310 aa12.86□□□□□ -0.35
RETREG3-203ENST00000585894 GRIN3AQ8TCU5 1115 aa12.86□□□□□ -0.35
RETREG3-203ENST00000585894 GAB3Q8WWW8 586 aa12.86□□□□□ -0.35
RETREG3-203ENST00000585894 EXOC2Q96KP1 924 aa12.86□□□□□ -0.35
RETREG3-203ENST00000585894 RNF157Q96PX1 679 aa12.86□□□□□ -0.35
RETREG3-203ENST00000585894 DDX56Q9NY93 547 aaKnown RBP12.86□□□□□ -0.35
RETREG3-203ENST00000585894 SERGEFQ9UGK8 458 aa12.86□□□□□ -0.35
RETREG3-203ENST00000585894 SARDHQ9UL12 918 aa12.86□□□□□ -0.35
RETREG3-203ENST00000585894 CCDC163A0A0D9SF12 145 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 MID1O15344 667 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 NRDCO43847 1150 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 IL1BP01584 269 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 CTNNA1P35221 906 aaKnown RBP12.85□□□□□ -0.35
RETREG3-203ENST00000585894 CDKN2BP42772 138 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 VASPP50552 380 aaPredicted RBP12.85□□□□□ -0.35
RETREG3-203ENST00000585894 TPMTP51580 245 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 CLCN6P51797 869 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 ADCY2Q08462 1091 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 SLC10A2Q12908 348 aaPredicted RBP12.85□□□□□ -0.35
RETREG3-203ENST00000585894 SIM2Q14190 667 aaPredicted RBP12.85□□□□□ -0.35
RETREG3-203ENST00000585894 USP39Q53GS9 565 aaKnown RBP12.85□□□□□ -0.35
RETREG3-203ENST00000585894 ODF2Q5BJF6 829 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 KAZNQ674X7 775 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 ZNF776Q68DI1 518 aaPredicted RBP12.85□□□□□ -0.35
RETREG3-203ENST00000585894 ZC3H14Q6PJT7 736 aaKnown RBP12.85□□□□□ -0.35
RETREG3-203ENST00000585894 SPOCD1Q6ZMY3 1216 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 DPY19L3Q6ZPD9 716 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 CEP68Q76N32 757 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 KBTBD6Q86V97 674 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 RFX6Q8HWS3 928 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 CCDC50Q8IVM0 306 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 KATNAL2Q8IYT4 538 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 TXLNBQ8N3L3 684 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 PLD5Q8N7P1 536 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 ALG3Q92685 438 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 HERPUD2Q9BSE4 406 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 SP110Q9HB58 689 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 UBA2Q9UBT2 640 aaPredicted RBP12.85□□□□□ -0.35
RETREG3-203ENST00000585894 IPO11Q9UI26 975 aaKnown RBP12.85□□□□□ -0.35
RETREG3-203ENST00000585894 IGHV1OR15-9A0A0B4J2B8 117 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 KRT86O43790 486 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 GJB3O75712 270 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 SLC20A2Q08357 652 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 ELAVL3Q14576 367 aaKnown RBP12.85□□□□□ -0.35
RETREG3-203ENST00000585894 PAFAH1B3Q15102 231 aaKnown RBP12.85□□□□□ -0.35
RETREG3-203ENST00000585894 CYTH1Q15438 398 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 CST6Q15828 149 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 IFI16Q16666 785 aaKnown RBP12.85□□□□□ -0.35
RETREG3-203ENST00000585894 B4GALNT4Q76KP1 1039 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 PEX26Q7Z412 305 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 RYBPQ8N488 228 aaPredicted RBP12.85□□□□□ -0.35
RETREG3-203ENST00000585894 ATPAF2Q8N5M1 289 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 LZTR1Q8N653 840 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 OR8D1Q8WZ84 308 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 TSGA10Q9BZW7 698 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 IRF2BPLQ9H1B7 796 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 DONSONQ9NYP3 566 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 USP36Q9P275 1121 aaKnown RBP12.85□□□□□ -0.35
RETREG3-203ENST00000585894 SAE1Q9UBE0 346 aaPredicted RBP12.85□□□□□ -0.35
RETREG3-203ENST00000585894 LHX3Q9UBR4 397 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 PCDHA3Q9Y5H8 950 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 HEY1Q9Y5J3 304 aa12.85□□□□□ -0.35
RETREG3-203ENST00000585894 DOCK9Q9BZ29 2069 aa12.84□□□□□ -0.35
RETREG3-203ENST00000585894 TNRC6BQ9UPQ9 1833 aaKnown RBP12.84□□□□□ -0.35
RETREG3-203ENST00000585894 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.84□□□□□ -0.35
RETREG3-203ENST00000585894 A0A1W2PP55 124 aa12.84□□□□□ -0.35
RETREG3-203ENST00000585894 MCF2LO15068 1137 aa12.84□□□□□ -0.35
RETREG3-203ENST00000585894 DNTTP04053 509 aa12.84□□□□□ -0.35
RETREG3-203ENST00000585894 ACADMP11310 421 aa12.84□□□□□ -0.35
RETREG3-203ENST00000585894 CTNNA2P26232 953 aa12.84□□□□□ -0.35
RETREG3-203ENST00000585894 CHRNA3P32297 505 aa12.84□□□□□ -0.35
RETREG3-203ENST00000585894 SLC8A1P32418 973 aa12.84□□□□□ -0.35
RETREG3-203ENST00000585894 SERPINB6P35237 376 aa12.84□□□□□ -0.35
RETREG3-203ENST00000585894 RGRP47804 291 aa12.84□□□□□ -0.35
RETREG3-203ENST00000585894 PEX5P50542 639 aa12.84□□□□□ -0.35
RETREG3-203ENST00000585894 CCNHP51946 323 aaPredicted RBP12.84□□□□□ -0.35
RETREG3-203ENST00000585894 RHOAP61586 193 aa12.84□□□□□ -0.35
RETREG3-203ENST00000585894 ZNF211Q13398 564 aaPredicted RBP12.84□□□□□ -0.35
RETREG3-203ENST00000585894 CARD16Q5EG05 197 aa12.84□□□□□ -0.35
RETREG3-203ENST00000585894 SLC9A4Q6AI14 798 aa12.84□□□□□ -0.35
RETREG3-203ENST00000585894 ARMCX6Q7L4S7 300 aa12.84□□□□□ -0.35
RETREG3-203ENST00000585894 TMEFF1Q8IYR6 380 aa12.84□□□□□ -0.35
RETREG3-203ENST00000585894 AADATQ8N5Z0 425 aa12.84□□□□□ -0.35
RETREG3-203ENST00000585894 PCDH20Q8N6Y1 951 aaKnown RBP12.84□□□□□ -0.35
RETREG3-203ENST00000585894 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.84□□□□□ -0.35
RETREG3-203ENST00000585894 GANCQ8TET4 914 aa12.84□□□□□ -0.35
RETREG3-203ENST00000585894 VOPP1Q96AW1 172 aa12.84□□□□□ -0.35
RETREG3-203ENST00000585894 HAUS1Q96CS2 278 aa12.84□□□□□ -0.35
RETREG3-203ENST00000585894 ZNF419Q96HQ0 510 aaPredicted RBP12.84□□□□□ -0.35
RETREG3-203ENST00000585894 HEMGNQ9BXL5 484 aa12.84□□□□□ -0.35
RETREG3-203ENST00000585894 CEP44Q9C0F1 390 aa12.84□□□□□ -0.35
RETREG3-203ENST00000585894 EPC1Q9H2F5 836 aa12.84□□□□□ -0.35
RETREG3-203ENST00000585894 PABPC3Q9H361 631 aaKnown RBP12.84□□□□□ -0.35
RETREG3-203ENST00000585894 ZDHHC6Q9H6R6 413 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms