RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 CTSKP43235 329 aa21.9■■□□□ 1.1
PPP4R1-228ENST00000584074 TAS2R38P59533 333 aa21.9■■□□□ 1.1
PPP4R1-228ENST00000584074 FANCCQ00597 558 aa21.9■■□□□ 1.1
PPP4R1-228ENST00000584074 MAMLD1Q13495 774 aa21.9■■□□□ 1.1
PPP4R1-228ENST00000584074 TRIP6Q15654 476 aaKnown RBP21.9■■□□□ 1.1
PPP4R1-228ENST00000584074 ARSIQ5FYB1 569 aa21.9■■□□□ 1.1
PPP4R1-228ENST00000584074 EFHC2Q5JST6 749 aa21.9■■□□□ 1.1
PPP4R1-228ENST00000584074 PIP5KL1Q5T9C9 394 aa21.9■■□□□ 1.1
PPP4R1-228ENST00000584074 DPY19L3Q6ZPD9 716 aa21.9■■□□□ 1.1
PPP4R1-228ENST00000584074 TMIEQ8NEW7 156 aa21.9■■□□□ 1.1
PPP4R1-228ENST00000584074 GRIN3AQ8TCU5 1115 aa21.9■■□□□ 1.1
PPP4R1-228ENST00000584074 SETD7Q8WTS6 366 aaKnown RBP21.9■■□□□ 1.1
PPP4R1-228ENST00000584074 ARHGEF2Q92974 986 aaKnown RBP21.9■■□□□ 1.1
PPP4R1-228ENST00000584074 ARRDC3Q96B67 414 aa21.9■■□□□ 1.1
PPP4R1-228ENST00000584074 SERAC1Q96JX3 654 aa21.9■■□□□ 1.1
PPP4R1-228ENST00000584074 AASDHPPTQ9NRN7 309 aa21.9■■□□□ 1.1
PPP4R1-228ENST00000584074 PARVAQ9NVD7 372 aa21.9■■□□□ 1.1
PPP4R1-228ENST00000584074 ARHGAP20Q9P2F6 1191 aa21.9■■□□□ 1.1
PPP4R1-228ENST00000584074 CEP295Q9C0D2 2601 aa21.89■■□□□ 1.09
PPP4R1-228ENST00000584074 H0Y8X5 98 aa21.89■■□□□ 1.09
PPP4R1-228ENST00000584074 RAMP2O60895 175 aa21.89■■□□□ 1.09
PPP4R1-228ENST00000584074 CD160O95971 181 aa21.89■■□□□ 1.09
PPP4R1-228ENST00000584074 PRNPP04156 253 aa21.89■■□□□ 1.09
PPP4R1-228ENST00000584074 SKILP12757 684 aa21.89■■□□□ 1.09
PPP4R1-228ENST00000584074 CD38P28907 300 aa21.89■■□□□ 1.09
PPP4R1-228ENST00000584074 ETFBP38117 255 aa21.89■■□□□ 1.09
PPP4R1-228ENST00000584074 RECQLP46063 649 aaPredicted RBP21.89■■□□□ 1.09
PPP4R1-228ENST00000584074 DNA2P51530 1060 aa21.89■■□□□ 1.09
PPP4R1-228ENST00000584074 C21orf59P57076 290 aa21.89■■□□□ 1.09
PPP4R1-228ENST00000584074 KLHL30Q0D2K2 578 aa21.89■■□□□ 1.09
PPP4R1-228ENST00000584074 PPP1R2P3Q6NXS1 205 aa21.89■■□□□ 1.09
PPP4R1-228ENST00000584074 TMC6Q7Z403 805 aa21.89■■□□□ 1.09
PPP4R1-228ENST00000584074 EDEM3Q9BZQ6 932 aa21.89■■□□□ 1.09
PPP4R1-228ENST00000584074 CEP44Q9C0F1 390 aa21.89■■□□□ 1.09
PPP4R1-228ENST00000584074 MAGEH1Q9H213 219 aa21.89■■□□□ 1.09
PPP4R1-228ENST00000584074 IL36AQ9UHA7 158 aa21.89■■□□□ 1.09
PPP4R1-228ENST00000584074 PCOLCE2Q9UKZ9 415 aa21.89■■□□□ 1.09
PPP4R1-228ENST00000584074 FZD10Q9ULW2 581 aa21.89■■□□□ 1.09
PPP4R1-228ENST00000584074 FCF1Q9Y324 198 aaKnown RBP21.89■■□□□ 1.09
PPP4R1-228ENST00000584074 PCDHB9Q9Y5E1 797 aa21.89■■□□□ 1.09
PPP4R1-228ENST00000584074 PCDHGB2Q9Y5G2 931 aa21.89■■□□□ 1.09
PPP4R1-228ENST00000584074 SPEGQ15772 3267 aa21.89■■□□□ 1.09
PPP4R1-228ENST00000584074 A0A1W2PR77 199 aa21.88■■□□□ 1.09
PPP4R1-228ENST00000584074 DDX3XO00571 662 aaKnown RBP eCLIP21.88■■□□□ 1.095e-13■■■■■ 40.6
PPP4R1-228ENST00000584074 CBFA2T3O75081 653 aa21.88■■□□□ 1.09
PPP4R1-228ENST00000584074 LEFTY1O75610 366 aa21.88■■□□□ 1.09
PPP4R1-228ENST00000584074 FTLP02792 175 aaPredicted RBP21.88■■□□□ 1.09
PPP4R1-228ENST00000584074 EPHB2P29323 1055 aa21.88■■□□□ 1.09
PPP4R1-228ENST00000584074 TPM4P67936 248 aa21.88■■□□□ 1.09
PPP4R1-228ENST00000584074 HNRNPDQ14103 355 aaKnown RBP21.88■■□□□ 1.09
PPP4R1-228ENST00000584074 ZNF423Q2M1K9 1284 aa21.88■■□□□ 1.09
PPP4R1-228ENST00000584074 PRAMEF14Q5SWL7 426 aa21.88■■□□□ 1.09
PPP4R1-228ENST00000584074 PLEKHA7Q6IQ23 1121 aa21.88■■□□□ 1.09
PPP4R1-228ENST00000584074 LEKR1Q6ZMV7 388 aa21.88■■□□□ 1.09
PPP4R1-228ENST00000584074 DBX2Q6ZNG2 339 aa21.88■■□□□ 1.09
PPP4R1-228ENST00000584074 PRPF39Q86UA1 669 aaKnown RBP21.88■■□□□ 1.09
PPP4R1-228ENST00000584074 PCDH20Q8N6Y1 951 aaKnown RBP21.88■■□□□ 1.09
PPP4R1-228ENST00000584074 TPX2Q9ULW0 747 aaKnown RBP21.88■■□□□ 1.09
PPP4R1-228ENST00000584074 WASF2Q9Y6W5 498 aa21.88■■□□□ 1.09
PPP4R1-228ENST00000584074 ACACBO00763 2458 aa21.88■■□□□ 1.09
PPP4R1-228ENST00000584074 DOCK4Q8N1I0 1966 aa21.88■■□□□ 1.09
PPP4R1-228ENST00000584074 PLXNA2O75051 1894 aa21.88■■□□□ 1.09
PPP4R1-228ENST00000584074 CREB3O43889 395 aa21.87■■□□□ 1.09
PPP4R1-228ENST00000584074 GZMAP12544 262 aa21.87■■□□□ 1.09
PPP4R1-228ENST00000584074 IL9RQ01113 521 aa21.87■■□□□ 1.09
PPP4R1-228ENST00000584074 POLD3Q15054 466 aaPredicted RBP21.87■■□□□ 1.09
PPP4R1-228ENST00000584074 CARD16Q5EG05 197 aa21.87■■□□□ 1.09
PPP4R1-228ENST00000584074 FIGNQ5HY92 759 aa21.87■■□□□ 1.09
PPP4R1-228ENST00000584074 TRIM69Q86WT6 500 aa21.87■■□□□ 1.09
PPP4R1-228ENST00000584074 RTL3Q8N8U3 475 aaKnown RBP21.87■■□□□ 1.09
PPP4R1-228ENST00000584074 TRIM7Q9C029 511 aa21.87■■□□□ 1.09
PPP4R1-228ENST00000584074 NOL6Q9H6R4 1146 aaKnown RBP21.87■■□□□ 1.09
PPP4R1-228ENST00000584074 DYRK4Q9NR20 520 aa21.87■■□□□ 1.09
PPP4R1-228ENST00000584074 HPCAL4Q9UM19 191 aa21.87■■□□□ 1.09
PPP4R1-228ENST00000584074 BTBD3Q9Y2F9 522 aa21.87■■□□□ 1.09
PPP4R1-228ENST00000584074 TMEM191CA6NGB0 347 aa21.86■■□□□ 1.09
PPP4R1-228ENST00000584074 HYAL3O43820 417 aaPredicted RBP21.86■■□□□ 1.09
PPP4R1-228ENST00000584074 PSMA2P25787 234 aa21.86■■□□□ 1.09
PPP4R1-228ENST00000584074 PBX1P40424 430 aa21.86■■□□□ 1.09
PPP4R1-228ENST00000584074 CCNHP51946 323 aaPredicted RBP21.86■■□□□ 1.09
PPP4R1-228ENST00000584074 AIF1P55008 147 aa21.86■■□□□ 1.09
PPP4R1-228ENST00000584074 UBASH3AP57075 661 aa21.86■■□□□ 1.09
PPP4R1-228ENST00000584074 ZSCAN23Q3MJ62 389 aa21.86■■□□□ 1.09
PPP4R1-228ENST00000584074 NAPEPLDQ6IQ20 393 aa21.86■■□□□ 1.09
PPP4R1-228ENST00000584074 ISG20Q96AZ6 181 aaKnown RBP21.86■■□□□ 1.09
PPP4R1-228ENST00000584074 SKA1Q96BD8 255 aa21.86■■□□□ 1.09
PPP4R1-228ENST00000584074 EPAS1Q99814 870 aa21.86■■□□□ 1.09
PPP4R1-228ENST00000584074 HEPHQ9BQS7 1158 aa21.86■■□□□ 1.09
PPP4R1-228ENST00000584074 SCNM1Q9BWG6 230 aa21.86■■□□□ 1.09
PPP4R1-228ENST00000584074 HDAC8Q9BY41 377 aa21.86■■□□□ 1.09
PPP4R1-228ENST00000584074 TM6SF2Q9BZW4 377 aa21.86■■□□□ 1.09
PPP4R1-228ENST00000584074 PREBQ9HCU5 417 aa21.86■■□□□ 1.09
PPP4R1-228ENST00000584074 GPATCH2LQ9NWQ4 482 aa21.86■■□□□ 1.09
PPP4R1-228ENST00000584074 ASPMQ8IZT6 3477 aa21.85■■□□□ 1.09
PPP4R1-228ENST00000584074 CXorf51AA0A1B0GTR3 108 aa21.85■■□□□ 1.09
PPP4R1-228ENST00000584074 FLRT2O43155 660 aa21.85■■□□□ 1.09
PPP4R1-228ENST00000584074 KDELR3O43731 214 aa21.85■■□□□ 1.09
PPP4R1-228ENST00000584074 RNGTTO60942 597 aaKnown RBP21.85■■□□□ 1.09
PPP4R1-228ENST00000584074 DESP17661 470 aa21.85■■□□□ 1.09
PPP4R1-228ENST00000584074 CCT8P50990 548 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms