RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 MRPL47Q9HD33 250 aaKnown RBP16.98■□□□□ 0.31
SREBF1-219ENST00000580540 TM9SF3Q9HD45 589 aa16.98■□□□□ 0.31
SREBF1-219ENST00000580540 DYRK4Q9NR20 520 aa16.98■□□□□ 0.31
SREBF1-219ENST00000580540 AP4E1Q9UPM8 1137 aa16.98■□□□□ 0.31
SREBF1-219ENST00000580540 NEU3Q9UQ49 428 aa16.98■□□□□ 0.31
SREBF1-219ENST00000580540 ASCC3Q8N3C0 2202 aaKnown RBP16.98■□□□□ 0.31
SREBF1-219ENST00000580540 NYNRINQ9P2P1 1898 aaKnown RBP16.97■□□□□ 0.31
SREBF1-219ENST00000580540 PRPSAP2O60256 369 aa16.97■□□□□ 0.31
SREBF1-219ENST00000580540 CTSLP07711 333 aa16.97■□□□□ 0.31
SREBF1-219ENST00000580540 TPI1P60174 286 aa16.97■□□□□ 0.31
SREBF1-219ENST00000580540 ARSIQ5FYB1 569 aa16.97■□□□□ 0.31
SREBF1-219ENST00000580540 N4BP2L1Q5TBK1 243 aaPredicted RBP16.97■□□□□ 0.31
SREBF1-219ENST00000580540 LAYNQ6UX15 382 aa16.97■□□□□ 0.31
SREBF1-219ENST00000580540 DPY19L3Q6ZPD9 716 aa16.97■□□□□ 0.31
SREBF1-219ENST00000580540 RTL3Q8N8U3 475 aaKnown RBP16.97■□□□□ 0.31
SREBF1-219ENST00000580540 TM6SF2Q9BZW4 377 aa16.97■□□□□ 0.31
SREBF1-219ENST00000580540 ZDHHC5Q9C0B5 715 aa16.97■□□□□ 0.31
SREBF1-219ENST00000580540 ISCUQ9H1K1 167 aa16.97■□□□□ 0.31
SREBF1-219ENST00000580540 A0A1W2PPC4 97 aa16.96■□□□□ 0.31
SREBF1-219ENST00000580540 DAPK3O43293 454 aa16.96■□□□□ 0.31
SREBF1-219ENST00000580540 BUB1O43683 1085 aa16.96■□□□□ 0.31
SREBF1-219ENST00000580540 PRNPP04156 253 aa16.96■□□□□ 0.31
SREBF1-219ENST00000580540 MIPP30301 263 aa16.96■□□□□ 0.31
SREBF1-219ENST00000580540 MAT2AP31153 395 aaKnown RBP16.96■□□□□ 0.31
SREBF1-219ENST00000580540 ZNF252P-AS1Q0IIN9 211 aa16.96■□□□□ 0.31
SREBF1-219ENST00000580540 CA9Q16790 459 aa16.96■□□□□ 0.31
SREBF1-219ENST00000580540 CARD16Q5EG05 197 aa16.96■□□□□ 0.31
SREBF1-219ENST00000580540 CCDC122Q5T0U0 273 aa16.96■□□□□ 0.31
SREBF1-219ENST00000580540 ERMARDQ5T6L9 678 aa16.96■□□□□ 0.31
SREBF1-219ENST00000580540 ARFGAP1Q8N6T3 406 aa16.96■□□□□ 0.31
SREBF1-219ENST00000580540 PCDH20Q8N6Y1 951 aaKnown RBP16.96■□□□□ 0.31
SREBF1-219ENST00000580540 TMIEQ8NEW7 156 aa16.96■□□□□ 0.31
SREBF1-219ENST00000580540 ARRDC3Q96B67 414 aa16.96■□□□□ 0.31
SREBF1-219ENST00000580540 SLC6A18Q96N87 628 aa16.96■□□□□ 0.31
SREBF1-219ENST00000580540 CEP44Q9C0F1 390 aa16.96■□□□□ 0.31
SREBF1-219ENST00000580540 SLC32A1Q9H598 525 aa16.96■□□□□ 0.31
SREBF1-219ENST00000580540 GAREM1Q9H706 876 aa16.96■□□□□ 0.31
SREBF1-219ENST00000580540 AASDHPPTQ9NRN7 309 aa16.96■□□□□ 0.31
SREBF1-219ENST00000580540 IL36AQ9UHA7 158 aa16.96■□□□□ 0.31
SREBF1-219ENST00000580540 PCDH15Q96QU1 1955 aa16.96■□□□□ 0.31
SREBF1-219ENST00000580540 NCOR2Q9Y618 2525 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 CACNA1EQ15878 2313 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 A0A087X0T9 212 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 RASA4BC9J798 803 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 EEF2KO00418 725 aaKnown RBP16.95■□□□□ 0.3
SREBF1-219ENST00000580540 RASA4O43374 803 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 KDELR3O43731 214 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 ZNF821O75541 412 aaPredicted RBP16.95■□□□□ 0.3
SREBF1-219ENST00000580540 LEFTY1O75610 366 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 ADRB1P08588 477 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 FAM228BP0C875 321 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 CSRP1P21291 193 aaKnown RBP16.95■□□□□ 0.3
SREBF1-219ENST00000580540 CCR5P51681 352 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 GEMIN4P57678 1058 aaKnown RBP16.95■□□□□ 0.3
SREBF1-219ENST00000580540 PPP2CBP62714 309 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 PPP2CAP67775 309 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 BNC1Q01954 994 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 KIF19Q2TAC6 998 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 HLA-BQ31612 363 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 PPP6R3Q5H9R7 873 aaPredicted RBP16.95■□□□□ 0.3
SREBF1-219ENST00000580540 AGBL4Q5VU57 503 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 IL27RAQ6UWB1 636 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 PRPF39Q86UA1 669 aaKnown RBP16.95■□□□□ 0.3
SREBF1-219ENST00000580540 NETO2Q8NC67 525 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 OR6K2Q8NGY2 324 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 FNIP1Q8TF40 1166 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 HMCESQ96FZ2 354 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 PEBP4Q96S96 227 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 HEPHQ9BQS7 1158 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 SNRNP25Q9BV90 132 aaKnown RBP16.95■□□□□ 0.3
SREBF1-219ENST00000580540 THAP2Q9H0W7 228 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 ZDHHC6Q9H6R6 413 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 EBF2Q9HAK2 575 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 IL21RQ9HBE5 538 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 DNAAF2Q9NVR5 837 aaKnown RBP16.95■□□□□ 0.3
SREBF1-219ENST00000580540 HECAQ9UBI9 543 aaPredicted RBP16.95■□□□□ 0.3
SREBF1-219ENST00000580540 ANKRD6Q9Y2G4 727 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 KNL1Q8NG31 2342 aa16.95■□□□□ 0.3
SREBF1-219ENST00000580540 RNF103O00237 685 aa16.94■□□□□ 0.3
SREBF1-219ENST00000580540 KCNK3O14649 394 aa16.94■□□□□ 0.3
SREBF1-219ENST00000580540 FGF10O15520 208 aaPredicted RBP16.94■□□□□ 0.3
SREBF1-219ENST00000580540 SLC7A4O43246 635 aa16.94■□□□□ 0.3
SREBF1-219ENST00000580540 PLRG1O43660 514 aaKnown RBP16.94■□□□□ 0.3
SREBF1-219ENST00000580540 CER1O95813 267 aa16.94■□□□□ 0.3
SREBF1-219ENST00000580540 CD160O95971 181 aa16.94■□□□□ 0.3
SREBF1-219ENST00000580540 EIF4A3P38919 411 aaKnown RBP16.94■□□□□ 0.3
SREBF1-219ENST00000580540 GRIA4P48058 902 aa16.94■□□□□ 0.3
SREBF1-219ENST00000580540 CCNHP51946 323 aaPredicted RBP16.94■□□□□ 0.3
SREBF1-219ENST00000580540 C21orf59P57076 290 aa16.94■□□□□ 0.3
SREBF1-219ENST00000580540 RACK1P63244 317 aaKnown RBP16.94■□□□□ 0.3
SREBF1-219ENST00000580540 CCDC15Q0P6D6 951 aa16.94■□□□□ 0.3
SREBF1-219ENST00000580540 SEMA3BQ13214 749 aa16.94■□□□□ 0.3
SREBF1-219ENST00000580540 SPECC1LQ69YQ0 1117 aa16.94■□□□□ 0.3
SREBF1-219ENST00000580540 ALKBH5Q6P6C2 394 aaKnown RBP16.94■□□□□ 0.3
SREBF1-219ENST00000580540 SERAC1Q96JX3 654 aa16.94■□□□□ 0.3
SREBF1-219ENST00000580540 BTBD6Q96KE9 485 aa16.94■□□□□ 0.3
SREBF1-219ENST00000580540 KCTD15Q96SI1 283 aaPredicted RBP16.94■□□□□ 0.3
SREBF1-219ENST00000580540 ORAI3Q9BRQ5 295 aa16.94■□□□□ 0.3
SREBF1-219ENST00000580540 NOL6Q9H6R4 1146 aaKnown RBP16.94■□□□□ 0.3
SREBF1-219ENST00000580540 OSGEPQ9NPF4 335 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms