RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 C1orf74Q96LT6 269 aa9.73□□□□□ -0.85
NPLOC4-219ENST00000576713 CCDC42Q96M95 316 aa9.73□□□□□ -0.85
NPLOC4-219ENST00000576713 PANX2Q96RD6 677 aa9.73□□□□□ -0.85
NPLOC4-219ENST00000576713 PSMB7Q99436 277 aa9.73□□□□□ -0.85
NPLOC4-219ENST00000576713 SNRNP25Q9BV90 132 aaKnown RBP9.73□□□□□ -0.85
NPLOC4-219ENST00000576713 SLC2A11Q9BYW1 496 aa9.73□□□□□ -0.85
NPLOC4-219ENST00000576713 DEF6Q9H4E7 631 aa9.73□□□□□ -0.85
NPLOC4-219ENST00000576713 CD93Q9NPY3 652 aa9.73□□□□□ -0.85
NPLOC4-219ENST00000576713 ZNHIT6Q9NWK9 470 aaKnown RBP9.73□□□□□ -0.85
NPLOC4-219ENST00000576713 ELOVL2Q9NXB9 296 aa9.73□□□□□ -0.85
NPLOC4-219ENST00000576713 FRRS1LQ9P0K9 344 aa9.73□□□□□ -0.85
NPLOC4-219ENST00000576713 OR12D3Q9UGF7 316 aa9.73□□□□□ -0.85
NPLOC4-219ENST00000576713 ANAPC7Q9UJX3 599 aa9.73□□□□□ -0.85
NPLOC4-219ENST00000576713 MMP17Q9ULZ9 603 aa9.73□□□□□ -0.85
NPLOC4-219ENST00000576713 MFHAS1Q9Y4C4 1052 aa9.73□□□□□ -0.85
NPLOC4-219ENST00000576713 SCINQ9Y6U3 715 aa9.73□□□□□ -0.85
NPLOC4-219ENST00000576713 R4GN57 208 aa9.73□□□□□ -0.85
NPLOC4-219ENST00000576713 A0A0D9SEW6 157 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 A0A1B0GVM2 712 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 A0A1W2PP55 124 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 TCAF2A6NFQ2 919 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 LAMTOR5O43504 91 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 PAPSS2O95340 614 aaPredicted RBP9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 H2AFZP0C0S5 128 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 TMEM253P0C7T8 217 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 HLA-EP13747 358 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 GLDCP23378 1020 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 LORP23490 312 aaPredicted RBP9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 NBL1P41271 181 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 MAGEA9P43362 315 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 CXCL12P48061 93 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 STK19P49842 368 aaPredicted RBP9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 TAS2R40P59535 323 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 MRPS21P82921 87 aaKnown RBP9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 ENPP2Q13822 863 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 ZNF234Q14588 700 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 CRY1Q16526 586 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 SMTNL2Q2TAL5 461 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 FBXO43Q4G163 708 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 KCNT1Q5JUK3 1230 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 RABGAP1LQ5R372 815 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 MBLAC2Q68D91 279 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 HEATR6Q6AI08 1181 aaKnown RBP9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 C20orf204Q6ZNR8 217 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 CHSY3Q70JA7 882 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 H2AFVQ71UI9 128 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 SYT13Q7L8C5 426 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 SLFN11Q7Z7L1 901 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 ACRBPQ8NEB7 543 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 ATOH1Q92858 354 aaPredicted RBP9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 TRIM11Q96F44 468 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 DDX50Q9BQ39 737 aaKnown RBP9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 CIPCQ9C0C6 399 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 OSBPL2Q9H1P3 480 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 RASSF4Q9H2L5 321 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 GOLPH3Q9H4A6 298 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 NOL6Q9H6R4 1146 aaKnown RBP9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 GRPEL1Q9HAV7 217 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 SLC12A6Q9UHW9 1150 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 TBC1D30Q9Y2I9 924 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 HYOU1Q9Y4L1 999 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 ACTL7AQ9Y615 435 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 STON1Q9Y6Q2 735 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 FANCMQ8IYD8 2048 aa9.72□□□□□ -0.85
NPLOC4-219ENST00000576713 CACNA1IQ9P0X4 2223 aa9.71□□□□□ -0.85
NPLOC4-219ENST00000576713 CACNA1HO95180 2353 aa9.71□□□□□ -0.85
NPLOC4-219ENST00000576713 H0Y626 953 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 SNAP91O60641 907 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 NDUFA10O95299 355 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 CD48P09326 243 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 VAV1P15498 845 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 FNTBP49356 437 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 CCR3P51677 355 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 NRG1Q02297 640 aaPredicted RBP9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 CDH18Q13634 790 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 PLEKHG6Q3KR16 790 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 ATP13A4Q4VNC1 1196 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 RNF219Q5W0B1 726 aaPredicted RBP9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 TP53INP2Q8IXH6 220 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 CHPFQ8IZ52 775 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 AHI1Q8N157 1196 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 FRMD1Q8N878 549 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 NIPA2Q8N8Q9 360 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 MDGA1Q8NFP4 955 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 OR7D4Q8NG98 312 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 SLC35G2Q8TBE7 412 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 CTNNBL1Q8WYA6 563 aaPredicted RBP9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 TTC17Q96AE7 1141 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 RPL10LQ96L21 214 aaKnown RBP9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 GABRG3Q99928 467 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 FEM1AQ9BSK4 669 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 DESI2Q9BSY9 194 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 ANP32EQ9BTT0 268 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 ZYG11BQ9C0D3 744 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 KLC2Q9H0B6 622 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 TMEM245Q9H330 911 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 ZWILCHQ9H900 591 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 MRPL47Q9HD33 250 aaKnown RBP9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 KLHL11Q9NVR0 708 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms