RNA–Protein interactions for RNA: ENST00000567377.5

COMMD4-218, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-218ENST00000567377 UBASH3AP57075 661 aa18.54■□□□□ 0.56
COMMD4-218ENST00000567377 YBEYP58557 167 aaPredicted RBP18.54■□□□□ 0.56
COMMD4-218ENST00000567377 BNC1Q01954 994 aa18.54■□□□□ 0.56
COMMD4-218ENST00000567377 CNTN1Q12860 1018 aa18.54■□□□□ 0.56
COMMD4-218ENST00000567377 OVGP1Q12889 678 aa18.54■□□□□ 0.56
COMMD4-218ENST00000567377 MAMLD1Q13495 774 aa18.54■□□□□ 0.56
COMMD4-218ENST00000567377 KIF19Q2TAC6 998 aa18.54■□□□□ 0.56
COMMD4-218ENST00000567377 RAB6CQ53S08 254 aa18.54■□□□□ 0.56
COMMD4-218ENST00000567377 DBX2Q6ZNG2 339 aa18.54■□□□□ 0.56
COMMD4-218ENST00000567377 TMC6Q7Z403 805 aa18.54■□□□□ 0.56
COMMD4-218ENST00000567377 VPS36Q86VN1 386 aa18.54■□□□□ 0.56
COMMD4-218ENST00000567377 TRIM69Q86WT6 500 aa18.54■□□□□ 0.56
COMMD4-218ENST00000567377 OR2I1PQ8NGU4 316 aa18.54■□□□□ 0.56
COMMD4-218ENST00000567377 FNIP1Q8TF40 1166 aa18.54■□□□□ 0.56
COMMD4-218ENST00000567377 HDAC8Q9BY41 377 aa18.54■□□□□ 0.56
COMMD4-218ENST00000567377 RAB6CQ9H0N0 254 aa18.54■□□□□ 0.56
COMMD4-218ENST00000567377 CATSPERBQ9H7T0 1116 aa18.54■□□□□ 0.56
COMMD4-218ENST00000567377 IL36AQ9UHA7 158 aa18.54■□□□□ 0.56
COMMD4-218ENST00000567377 SCINQ9Y6U3 715 aa18.54■□□□□ 0.56
COMMD4-218ENST00000567377 FAM72CH0Y354 149 aa18.53■□□□□ 0.56
COMMD4-218ENST00000567377 K7ERQ8 282 aa18.53■□□□□ 0.56
COMMD4-218ENST00000567377 FGF10O15520 208 aaPredicted RBP18.53■□□□□ 0.56
COMMD4-218ENST00000567377 FLRT2O43155 660 aa18.53■□□□□ 0.56
COMMD4-218ENST00000567377 SMAD6O43541 496 aaKnown RBP18.53■□□□□ 0.56
COMMD4-218ENST00000567377 RNGTTO60942 597 aaKnown RBP18.53■□□□□ 0.56
COMMD4-218ENST00000567377 FTLP02792 175 aaPredicted RBP18.53■□□□□ 0.56
COMMD4-218ENST00000567377 TPM3P06753 285 aa18.53■□□□□ 0.56
COMMD4-218ENST00000567377 CD38P28907 300 aa18.53■□□□□ 0.56
COMMD4-218ENST00000567377 EPHB2P29323 1055 aa18.53■□□□□ 0.56
COMMD4-218ENST00000567377 CTSKP43235 329 aa18.53■□□□□ 0.56
COMMD4-218ENST00000567377 SIM1P81133 766 aaPredicted RBP18.53■□□□□ 0.56
COMMD4-218ENST00000567377 POLD3Q15054 466 aaPredicted RBP18.53■□□□□ 0.56
COMMD4-218ENST00000567377 ZNF423Q2M1K9 1284 aa18.53■□□□□ 0.56
COMMD4-218ENST00000567377 CARD16Q5EG05 197 aa18.53■□□□□ 0.56
COMMD4-218ENST00000567377 FAM72AQ5TYM5 149 aa18.53■□□□□ 0.56
COMMD4-218ENST00000567377 AGBL4Q5VU57 503 aa18.53■□□□□ 0.56
COMMD4-218ENST00000567377 FAM72DQ6L9T8 149 aa18.53■□□□□ 0.56
COMMD4-218ENST00000567377 LINGO4Q6UY18 593 aa18.53■□□□□ 0.56
COMMD4-218ENST00000567377 ZNF571Q7Z3V5 609 aaPredicted RBP18.53■□□□□ 0.56
COMMD4-218ENST00000567377 LUZP1Q86V48 1076 aa18.53■□□□□ 0.56
COMMD4-218ENST00000567377 FAM72BQ86X60 149 aa18.53■□□□□ 0.56
COMMD4-218ENST00000567377 NAXDQ8IW45 347 aa18.53■□□□□ 0.56
COMMD4-218ENST00000567377 RTL3Q8N8U3 475 aaKnown RBP18.53■□□□□ 0.56
COMMD4-218ENST00000567377 CASKIN2Q8WXE0 1202 aa18.53■□□□□ 0.56
COMMD4-218ENST00000567377 ARHGEF2Q92974 986 aaKnown RBP18.53■□□□□ 0.56
COMMD4-218ENST00000567377 LRIG1Q96JA1 1093 aa18.53■□□□□ 0.56
COMMD4-218ENST00000567377 HEPHQ9BQS7 1158 aa18.53■□□□□ 0.56
COMMD4-218ENST00000567377 MRPL47Q9HD33 250 aaKnown RBP18.53■□□□□ 0.56
COMMD4-218ENST00000567377 TAS2R14Q9NYV8 317 aa18.53■□□□□ 0.56
COMMD4-218ENST00000567377 FZD10Q9ULW2 581 aa18.53■□□□□ 0.56
COMMD4-218ENST00000567377 NYNRINQ9P2P1 1898 aaKnown RBP18.52■□□□□ 0.56
COMMD4-218ENST00000567377 WASH4PA8MWX3 477 aa18.52■□□□□ 0.56
COMMD4-218ENST00000567377 KPNA3O00505 521 aaPredicted RBP18.52■□□□□ 0.56
COMMD4-218ENST00000567377 YKT6O15498 198 aa18.52■□□□□ 0.56
COMMD4-218ENST00000567377 SH3BP5O60239 455 aa18.52■□□□□ 0.56
COMMD4-218ENST00000567377 PCDHGA12O60330 932 aa18.52■□□□□ 0.56
COMMD4-218ENST00000567377 RNF8O76064 485 aa18.52■□□□□ 0.56
COMMD4-218ENST00000567377 ZNF135P52742 658 aaPredicted RBP18.52■□□□□ 0.56
COMMD4-218ENST00000567377 ARF5P84085 180 aa18.52■□□□□ 0.56
COMMD4-218ENST00000567377 TRIP6Q15654 476 aaKnown RBP18.52■□□□□ 0.56
COMMD4-218ENST00000567377 INAVAQ3KP66 663 aa18.52■□□□□ 0.56
COMMD4-218ENST00000567377 SETMARQ53H47 684 aaPredicted RBP18.52■□□□□ 0.56
COMMD4-218ENST00000567377 NAPEPLDQ6IQ20 393 aa18.52■□□□□ 0.56
COMMD4-218ENST00000567377 DPY19L3Q6ZPD9 716 aa18.52■□□□□ 0.56
COMMD4-218ENST00000567377 IQCHQ86VS3 1027 aa18.52■□□□□ 0.56
COMMD4-218ENST00000567377 ZSCAN30Q86W11 494 aa18.52■□□□□ 0.56
COMMD4-218ENST00000567377 PSTKQ8IV42 348 aaKnown RBP18.52■□□□□ 0.56
COMMD4-218ENST00000567377 SERAC1Q96JX3 654 aa18.52■□□□□ 0.56
COMMD4-218ENST00000567377 CDC6Q99741 560 aa18.52■□□□□ 0.56
COMMD4-218ENST00000567377 AASDHPPTQ9NRN7 309 aa18.52■□□□□ 0.56
COMMD4-218ENST00000567377 DNAI1Q9UI46 699 aa18.52■□□□□ 0.56
COMMD4-218ENST00000567377 NEU3Q9UQ49 428 aa18.52■□□□□ 0.56
COMMD4-218ENST00000567377 SNX11Q9Y5W9 270 aa18.52■□□□□ 0.56
COMMD4-218ENST00000567377 CHD5Q8TDI0 1954 aa18.51■□□□□ 0.55
COMMD4-218ENST00000567377 TMEM191CA6NGB0 347 aa18.51■□□□□ 0.55
COMMD4-218ENST00000567377 TMCO5BA8MYB1 307 aa18.51■□□□□ 0.55
COMMD4-218ENST00000567377 KDELR3O43731 214 aa18.51■□□□□ 0.55
COMMD4-218ENST00000567377 CTSLP07711 333 aa18.51■□□□□ 0.55
COMMD4-218ENST00000567377 GLDCP23378 1020 aa18.51■□□□□ 0.55
COMMD4-218ENST00000567377 PSMA2P25787 234 aa18.51■□□□□ 0.55
COMMD4-218ENST00000567377 PBX1P40424 430 aa18.51■□□□□ 0.55
COMMD4-218ENST00000567377 CCT8P50990 548 aa18.51■□□□□ 0.55
COMMD4-218ENST00000567377 ZBED6P86452 979 aa18.51■□□□□ 0.55
COMMD4-218ENST00000567377 ACAP1Q15027 740 aa18.51■□□□□ 0.55
COMMD4-218ENST00000567377 PARP15Q460N3 678 aa18.51■□□□□ 0.55
COMMD4-218ENST00000567377 INO80DQ53TQ3 878 aaPredicted RBP18.51■□□□□ 0.55
COMMD4-218ENST00000567377 ERN2Q76MJ5 926 aaKnown RBP18.51■□□□□ 0.55
COMMD4-218ENST00000567377 GLRX5Q86SX6 157 aa18.51■□□□□ 0.55
COMMD4-218ENST00000567377 OXR1Q8N573 874 aa18.51■□□□□ 0.55
COMMD4-218ENST00000567377 MFSD2AQ8NA29 543 aa18.51■□□□□ 0.55
COMMD4-218ENST00000567377 ISCUQ9H1K1 167 aa18.51■□□□□ 0.55
COMMD4-218ENST00000567377 FNDC3AQ9Y2H6 1198 aaKnown RBP18.51■□□□□ 0.55
COMMD4-218ENST00000567377 SLCO1B1Q9Y6L6 691 aa18.51■□□□□ 0.55
COMMD4-218ENST00000567377 MAP1BP46821 2468 aaKnown RBP18.5■□□□□ 0.55
COMMD4-218ENST00000567377 CACNA1BQ00975 2339 aa18.5■□□□□ 0.55
COMMD4-218ENST00000567377 PRAMEF26H0Y7S4 382 aa18.5■□□□□ 0.55
COMMD4-218ENST00000567377 DDX3XO00571 662 aaKnown RBP eCLIP18.5■□□□□ 0.553e-7■■□□□ 12.4
COMMD4-218ENST00000567377 ZNF821O75541 412 aaPredicted RBP18.5■□□□□ 0.55
COMMD4-218ENST00000567377 GSRP00390 522 aa18.5■□□□□ 0.55
COMMD4-218ENST00000567377 ACVRL1P37023 503 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms