RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 C22orf39Q6P5X5 142 aa12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 ZC3H14Q6PJT7 736 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 KIAA1324Q6UXG2 1013 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 PEX26Q7Z412 305 aa12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 MMAAQ8IVH4 418 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 PLPP6Q8IY26 295 aa12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 SYCE1Q8N0S2 351 aa12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 FAM160A2Q8N612 972 aaPredicted RBP12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 PCDH20Q8N6Y1 951 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 PLD5Q8N7P1 536 aa12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 EXD1Q8NHP7 514 aa12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 CASKIN2Q8WXE0 1202 aa12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 PHOX2BQ99453 314 aa12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 MAK16Q9BXY0 300 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 USP36Q9P275 1121 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 IPO11Q9UI26 975 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 MBD1Q9UIS9 605 aaPredicted RBP12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 AMFRQ9UKV5 643 aa12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 PPM1HQ9ULR3 514 aa12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 EML5Q05BV3 1969 aa12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 MYO15AQ9UKN7 3530 aa12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 CCDC66A2RUB6 948 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 RNF103O00237 685 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 MFSD11O43934 449 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 RNASEH1O60930 286 aaKnown RBP12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 ZNF217O75362 1048 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 TMCC1O94876 653 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 FTCDO95954 541 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 PEX11BO96011 259 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 CTSLP07711 333 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 KRT10P13645 584 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 DNA2P51530 1060 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 TPMTP51580 245 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 GBE1Q04446 702 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 ZBTB16Q05516 673 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 IL10RBQ08334 325 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 ADCY2Q08462 1091 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 BYSLQ13895 437 aaKnown RBP12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 SIM2Q14190 667 aaPredicted RBP12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 LLGL1Q15334 1064 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 CST6Q15828 149 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 ZNF776Q68DI1 518 aaPredicted RBP12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 SPOCD1Q6ZMY3 1216 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 DPY19L3Q6ZPD9 716 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 CACUL1Q86Y37 369 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 CHST14Q8NCH0 376 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 OR8D1Q8WZ84 308 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 ALG3Q92685 438 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 VOPP1Q96AW1 172 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 EPC1Q9H2F5 836 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 UBA2Q9UBT2 640 aaPredicted RBP12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 SARDHQ9UL12 918 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 PACSIN2Q9UNF0 486 aaPredicted RBP12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 NYNRINQ9P2P1 1898 aaKnown RBP12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 USP34Q70CQ2 3546 aa12.16□□□□□ -0.46
RABGGTA-218ENST00000560777 IGHV1OR15-9A0A0B4J2B8 117 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 PROB1E7EW31 1015 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 APOL1O14791 398 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 ALOX15BO15296 676 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 MID1O15344 667 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 DDX3YO15523 660 aaKnown RBP12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 MAP3K6O95382 1288 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 IL1BP01584 269 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 IGLV3-19P01714 112 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 DNTTP04053 509 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 PYGMP11217 842 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 ACADMP11310 421 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 ZFXP17010 805 aaPredicted RBP12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 BCKDHBP21953 392 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 CHRNA3P32297 505 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 SLC8A1P32418 973 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 METAP1P53582 386 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 RWDD2BP57060 319 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 SLC10A7Q0GE19 358 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 GALNT2Q10471 571 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 TFDP3Q5H9I0 405 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 KAZNQ674X7 775 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 KBTBD6Q86V97 674 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 RFX6Q8HWS3 928 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 LRRC49Q8IUZ0 686 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 SUMF1Q8NBK3 374 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 TMIEQ8NEW7 156 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 OR2AP1Q8NGE2 309 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 HES6Q96HZ4 224 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 RBM41Q96IZ5 413 aaKnown RBP12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 ZC3H10Q96K80 434 aaKnown RBP12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 TM6SF2Q9BZW4 377 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 DUSP15Q9H1R2 295 aaPredicted RBP12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 PABPC3Q9H361 631 aaKnown RBP12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 SEMA4AQ9H3S1 761 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 SP110Q9HB58 689 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 DTLQ9NZJ0 730 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 LHX3Q9UBR4 397 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 SCML1Q9UN30 329 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 CYP8B1Q9UNU6 501 aa12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 FARP1Q9Y4F1 1045 aaPredicted RBP12.15□□□□□ -0.46
RABGGTA-218ENST00000560777 ABCA7Q8IZY2 2146 aa12.14□□□□□ -0.47
RABGGTA-218ENST00000560777 hCG_1818297A0A087WSY0 165 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms