RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 ICA1LQ8NDH6 482 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 CCDC112Q8NEF3 446 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 MCPH1Q8NEM0 835 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 TMIEQ8NEW7 156 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 OR10H5Q8NGA6 315 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 OR9A1PQ8NGU1 263 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 OR8K5Q8NH50 307 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 METTL6Q8TCB7 284 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 URGCPQ8TCY9 931 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 CCDC12Q8WUD4 166 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 ASZ1Q8WWH4 475 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 VPS33AQ96AX1 596 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 ACSF2Q96CM8 615 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 SLC25A36Q96CQ1 311 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 RMDN1Q96DB5 314 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 C18orf8Q96DM3 657 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 EEF2KMTQ96G04 330 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 APIPQ96GX9 242 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 MRGPRX3Q96LB0 322 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 TSNARE1Q96NA8 513 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 INPP4AQ96PE3 977 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 ZBTB18Q99592 522 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 GORASP1Q9BQQ3 440 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 GPR62Q9BZJ7 368 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 GPR61Q9BZJ8 451 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 DCLK3Q9C098 648 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 POLR1EQ9GZS1 481 aaKnown RBP4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 PRDM13Q9H4Q3 707 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 TDRD3Q9H7E2 651 aaKnown RBP4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 C14orf93Q9H972 538 aaKnown RBP4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 FBRSL1Q9HCM7 1045 aaKnown RBP4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 NRIP3Q9NQ35 241 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 KCND1Q9NSA2 647 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 DECR2Q9NUI1 292 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 ABCB8Q9NUT2 735 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 MRPL39Q9NYK5 338 aaKnown RBP4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 MRPS7Q9Y2R9 242 aaKnown RBP4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 COPG1Q9Y678 874 aaKnown RBP4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 BZW2Q9Y6E2 419 aaKnown RBP4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 FAM169AQ9Y6X4 670 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 FPGT-TNNI3KV9GXZ4 949 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 A0A1W2PPW3 197 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 A0A1W2PRV1 198 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 ARHGEF37A1IGU5 675 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 SYCE3A1L190 88 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 OR6C75A6NL08 312 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 TRIM38O00635 465 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 SEMA7AO75326 666 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 TADA2AO75478 443 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 CDC123O75794 336 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 SEC31AO94979 1220 aaKnown RBP4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 CAMTA2O94983 1202 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 SCAF4O95104 1147 aaKnown RBP4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 AGTP01019 485 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 TP53P04637 393 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 IL6P05231 212 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 FHP07954 510 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 PABPC4LP0CB38 370 aaKnown RBP4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 RARBP10826 455 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 CYP19A1P11511 503 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 CHN1P15882 459 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 CRABP2P29373 138 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 LSP1P33241 339 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 MDH1P40925 334 aaKnown RBP4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 CAPZA2P47755 286 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 POU3F4P49335 361 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 TUFMP49411 452 aaKnown RBP4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 MECP2P51608 486 aaKnown RBP4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 CCR3P51677 355 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 MFAP3P55082 362 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 STX17P56962 302 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 TAS2R40P59535 323 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 RNF4P78317 190 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 DLG4P78352 724 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 PRAMEP78395 509 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 GAD2Q05329 585 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 CHRNDQ07001 517 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 TNK2Q07912 1038 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 CDC20Q12834 499 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 ITGB3BPQ13352 177 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 ZNF177Q13360 481 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 CAPSQ13938 189 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 SLBPQ14493 270 aaKnown RBP eCLIP4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 HERC3Q15034 1050 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 SNX17Q15036 470 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 USF2Q15853 346 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 NKAIN1Q4KMZ8 207 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 ZMAT1Q5H9K5 638 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 THEM4Q5T1C6 240 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 PRAMEF20Q5VT98 475 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 CACHD1Q5VU97 1274 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 GARNL3Q5VVW2 1013 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 TDRD10Q5VZ19 366 aaKnown RBP4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 ANKRD40Q6AI12 368 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 HEPHL1Q6MZM0 1159 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 TIGD7Q6NT04 549 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 NFRKBQ6P4R8 1299 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 DEGS2Q6QHC5 323 aa4.6□□□□□ -1.67
HMGB3P26-201ENST00000560051 TMC5Q6UXY8 1006 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms