RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 HIC2Q96JB3 615 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 VCPIP1Q96JH7 1222 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 C8orf48Q96LL4 319 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 FANCD2OSQ96PS1 177 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 DEPDC7Q96QD5 511 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 DUSP9Q99956 384 aaKnown RBP5.7□□□□□ -1.5
CHKA-204ENST00000528235 ZHX3Q9H4I2 956 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 CCSER2Q9H7U1 834 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 CRTAC1Q9NQ79 661 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 GDF3Q9NR23 364 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 AASDHPPTQ9NRN7 309 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 KRT82Q9NSB4 513 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 COMMD8Q9NX08 183 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 GDAP2Q9NXN4 497 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 PLK2Q9NYY3 685 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 NCKAP1Q9Y2A7 1128 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 PCDHB1Q9Y5F3 818 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 ICE1Q9Y2F5 2266 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 DOPEY1Q5JWR5 2465 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 BOD1L1Q8NFC6 3051 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 SPTBN1Q01082 2364 aaKnown RBP5.7□□□□□ -1.5
CHKA-204ENST00000528235 SCN8AQ9UQD0 1980 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 LRRK2Q5S007 2527 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 NPHP3-ACAD11A0A0J9YXS1 232 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 FAM47DPA6NHR8 397 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 PP2D1A8MPX8 630 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 ANKRD63C9JTQ0 380 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 SUV39H1O43463 412 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 TSPAN3O60637 253 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 MTRF1O75570 445 aaKnown RBP5.69□□□□□ -1.5
CHKA-204ENST00000528235 CTDNEP1O95476 244 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 HNRNPCP07910 306 aaKnown RBP eCLIP5.69□□□□□ -1.59e-6■■■□□ 17.3
CHKA-204ENST00000528235 GSTP1P09211 210 aaKnown RBP5.69□□□□□ -1.5
CHKA-204ENST00000528235 TMEM191BP0C7N4 346 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 PLA2G4BP0C869 781 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 MYBL2P10244 700 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 SFTPCP11686 197 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 ACO1P21399 889 aaKnown RBP5.69□□□□□ -1.5
CHKA-204ENST00000528235 ACP1P24666 158 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 CD38P28907 300 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 EPHA8P29322 1005 aaPredicted RBP5.69□□□□□ -1.5
CHKA-204ENST00000528235 LSSP48449 732 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 TUBP50607 506 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 INHBCP55103 352 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 SH3BGRP55822 239 aaPredicted RBP5.69□□□□□ -1.5
CHKA-204ENST00000528235 GUCY1B3Q02153 619 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 GRIN1Q05586 938 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 ST3GAL1Q11201 340 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 WASHC5Q12768 1159 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 BNIP3Q12983 259 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 CDK5R2Q13319 367 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 DHX8Q14562 1220 aaKnown RBP5.69□□□□□ -1.5
CHKA-204ENST00000528235 ZNF234Q14588 700 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 POSTNQ15063 836 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 SOWAHAQ2M3V2 549 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 TTC31Q49AM3 519 aaPredicted RBP5.69□□□□□ -1.5
CHKA-204ENST00000528235 MDH1BQ5I0G3 518 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 SLC39A4Q6P5W5 647 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 DTHD1Q6ZMT9 781 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 KCNK18Q7Z418 384 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 SPATS2Q86XZ4 545 aaKnown RBP5.69□□□□□ -1.5
CHKA-204ENST00000528235 OXR1Q8N573 874 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 IGSF22Q8N9C0 903 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 EXD3Q8N9H8 876 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 PHC3Q8NDX5 983 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 OR6B3Q8NGW1 331 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 WBP2Q969T9 261 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 MRRFQ96E11 262 aaKnown RBP5.69□□□□□ -1.5
CHKA-204ENST00000528235 CCDC34Q96HJ3 373 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 ANKRD36BP1Q96IX9 119 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 RSRC1Q96IZ7 334 aaKnown RBP5.69□□□□□ -1.5
CHKA-204ENST00000528235 PLIN2Q99541 437 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 BAG1Q99933 345 aaPredicted RBP5.69□□□□□ -1.5
CHKA-204ENST00000528235 TM6SF1Q9BZW5 370 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 CIPCQ9C0C6 399 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 ELOVL4Q9GZR5 314 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 ABCG4Q9H172 646 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 SNX25Q9H3E2 840 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 POLR1BQ9H9Y6 1135 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 SGK2Q9HBY8 427 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.69□□□□□ -1.5
CHKA-204ENST00000528235 ITGA11Q9UKX5 1188 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 SRPK3Q9UPE1 567 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 ATP8B3O60423 1300 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 NBPF19A0A087WUL8 3843 aa5.69□□□□□ -1.5
CHKA-204ENST00000528235 A0A1W2PPC4 97 aa5.68□□□□□ -1.5
CHKA-204ENST00000528235 TLR5O60602 858 aa5.68□□□□□ -1.5
CHKA-204ENST00000528235 RNGTTO60942 597 aaKnown RBP5.68□□□□□ -1.5
CHKA-204ENST00000528235 TBCAO75347 108 aaKnown RBP5.68□□□□□ -1.5
CHKA-204ENST00000528235 CSO75390 466 aaKnown RBP5.68□□□□□ -1.5
CHKA-204ENST00000528235 KIAA0754O94854 1291 aa5.68□□□□□ -1.5
CHKA-204ENST00000528235 LDHAP00338 332 aaKnown RBP5.68□□□□□ -1.5
CHKA-204ENST00000528235 CYBBP04839 570 aa5.68□□□□□ -1.5
CHKA-204ENST00000528235 TPM1P09493 284 aa5.68□□□□□ -1.5
CHKA-204ENST00000528235 CR2P20023 1033 aa5.68□□□□□ -1.5
CHKA-204ENST00000528235 PRKCHP24723 683 aa5.68□□□□□ -1.5
CHKA-204ENST00000528235 CHKAP35790 457 aa5.68□□□□□ -1.5
CHKA-204ENST00000528235 ATP5C1P36542 298 aaKnown RBP5.68□□□□□ -1.5
CHKA-204ENST00000528235 GNL1P36915 607 aaPredicted RBP5.68□□□□□ -1.5
CHKA-204ENST00000528235 NASPP49321 788 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms