RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 DUSP15Q9H1R2 295 aaPredicted RBP13.8□□□□□ -0.2
COL1A1-208ENST00000494334 SARDHQ9UL12 918 aa13.8□□□□□ -0.2
COL1A1-208ENST00000494334 PPM1HQ9ULR3 514 aa13.8□□□□□ -0.2
COL1A1-208ENST00000494334 SMG5Q9UPR3 1016 aaKnown RBP13.8□□□□□ -0.2
COL1A1-208ENST00000494334 CHD5Q8TDI0 1954 aa13.8□□□□□ -0.2
COL1A1-208ENST00000494334 ZNF487B1APH4 448 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 ALOX15BO15296 676 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 MID1O15344 667 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 NRDCO43847 1150 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 TMCC1O94876 653 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 IL1BP01584 269 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 IGLV3-19P01714 112 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 CTSLP07711 333 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 CHRNA3P32297 505 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 SLC8A1P32418 973 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 MARCKSL1P49006 195 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 DNA2P51530 1060 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 CYTH1Q15438 398 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 CST6Q15828 149 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 IFI16Q16666 785 aaKnown RBP13.79□□□□□ -0.2
COL1A1-208ENST00000494334 CARD16Q5EG05 197 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 MFSD7Q6UXD7 560 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 DPY19L3Q6ZPD9 716 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 ASCL5Q7RTU5 278 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 C11orf74Q86VG3 221 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 PLPP6Q8IY26 295 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 CHST14Q8NCH0 376 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 KRT35Q92764 455 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 FAM122AQ96E09 287 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 PDLIM2Q96JY6 352 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 CCDC114Q96M63 670 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 TM6SF2Q9BZW4 377 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 PABPC3Q9H361 631 aaKnown RBP13.79□□□□□ -0.2
COL1A1-208ENST00000494334 WSB2Q9NYS7 404 aaPredicted RBP13.79□□□□□ -0.2
COL1A1-208ENST00000494334 UBA2Q9UBT2 640 aaPredicted RBP13.79□□□□□ -0.2
COL1A1-208ENST00000494334 IPO11Q9UI26 975 aaKnown RBP13.79□□□□□ -0.2
COL1A1-208ENST00000494334 SCML1Q9UN30 329 aa13.79□□□□□ -0.2
COL1A1-208ENST00000494334 FARP1Q9Y4F1 1045 aaPredicted RBP13.79□□□□□ -0.2
COL1A1-208ENST00000494334 PRR23AA6NEV1 266 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 RNF103O00237 685 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 MAP3K13O43283 966 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 MFSD11O43934 449 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 PALMO75781 387 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 CCDC175P0C221 793 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 C5AR1P21730 350 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 CD6P30203 668 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 OXTRP30559 389 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 CTNNA1P35221 906 aaKnown RBP13.78□□□□□ -0.2
COL1A1-208ENST00000494334 PLA2G5P39877 138 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 RECQLP46063 649 aaPredicted RBP13.78□□□□□ -0.2
COL1A1-208ENST00000494334 PSMD8P48556 350 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 METAP1P53582 386 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 IL10RBQ08334 325 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 TTC31Q49AM3 519 aaPredicted RBP13.78□□□□□ -0.2
COL1A1-208ENST00000494334 ODF2Q5BJF6 829 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 PMS2CLQ68D20 193 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 SLC36A4Q6YBV0 504 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 DSG4Q86SJ6 1040 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 KATNAL2Q8IYT4 538 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 RNF10Q8N5U6 811 aaKnown RBP13.78□□□□□ -0.2
COL1A1-208ENST00000494334 TMIEQ8NEW7 156 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 OR2AP1Q8NGE2 309 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 PIP4K2CQ8TBX8 421 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 TOE1Q96GM8 510 aaKnown RBP13.78□□□□□ -0.2
COL1A1-208ENST00000494334 HEPHQ9BQS7 1158 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 MAK16Q9BXY0 300 aaKnown RBP13.78□□□□□ -0.2
COL1A1-208ENST00000494334 TSGA10Q9BZW7 698 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 SP110Q9HB58 689 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 FBXL12Q9NXK8 326 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 HECAQ9UBI9 543 aaPredicted RBP13.78□□□□□ -0.2
COL1A1-208ENST00000494334 SERGEFQ9UGK8 458 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 RAB23Q9ULC3 237 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 GUCA1BQ9UMX6 200 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.78□□□□□ -0.2
COL1A1-208ENST00000494334 PCDHA3Q9Y5H8 950 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 WASF2Q9Y6W5 498 aa13.78□□□□□ -0.2
COL1A1-208ENST00000494334 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 A0A1W2PP55 124 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 KRT86O43790 486 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 MAFKO60675 156 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 RHOBTB1O94844 696 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 ZRANB2O95218 330 aaKnown RBP eCLIP13.77□□□□□ -0.21
COL1A1-208ENST00000494334 MAP3K6O95382 1288 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 PEX11BO96011 259 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 ADH1BP00325 375 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 GSRP00390 522 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 CTNNA2P26232 953 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 ACSL1P33121 698 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 CDKN2BP42772 138 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 CCNHP51946 323 aaPredicted RBP13.77□□□□□ -0.21
COL1A1-208ENST00000494334 RHOAP61586 193 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 SNRPD1P62314 119 aaKnown RBP13.77□□□□□ -0.21
COL1A1-208ENST00000494334 RPL6Q02878 288 aaKnown RBP13.77□□□□□ -0.21
COL1A1-208ENST00000494334 GBE1Q04446 702 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 EML5Q05BV3 1969 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 SLC10A2Q12908 348 aaPredicted RBP13.77□□□□□ -0.21
COL1A1-208ENST00000494334 TAZQ16635 292 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 ARSIQ5FYB1 569 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 FAM46CQ5VWP2 391 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 SLC9A4Q6AI14 798 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms