RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 RPL7AP62424 266 aaKnown RBP19.81■□□□□ 0.76
USP40-207ENST00000450940 PPP2CBP62714 309 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 PPP2CAP67775 309 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 NR1I3Q14994 352 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 KLHL40Q2TBA0 621 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 PIP5KL1Q5T9C9 394 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 LAYNQ6UX15 382 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 SLFN11Q7Z7L1 901 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 PLPP6Q8IY26 295 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 ARHGEF2Q92974 986 aaKnown RBP19.81■□□□□ 0.76
USP40-207ENST00000450940 SKA1Q96BD8 255 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 TBC1D31Q96DN5 1066 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 CNPY3Q9BT09 278 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 EDEM3Q9BZQ6 932 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 TTYH3Q9C0H2 523 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 MAGEH1Q9H213 219 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 PREBQ9HCU5 417 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 TAS2R14Q9NYV8 317 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 AKAP13Q12802 2813 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 FAM221BA6H8Z2 402 aa19.8■□□□□ 0.76
USP40-207ENST00000450940 ANKRD62A6NC57 917 aa19.8■□□□□ 0.76
USP40-207ENST00000450940 LRRC53A6NM62 1247 aa19.8■□□□□ 0.76
USP40-207ENST00000450940 H0Y8X5 98 aa19.8■□□□□ 0.76
USP40-207ENST00000450940 BNIP3LO60238 219 aa19.8■□□□□ 0.76
USP40-207ENST00000450940 PRNPP04156 253 aa19.8■□□□□ 0.76
USP40-207ENST00000450940 AIF1P55008 147 aa19.8■□□□□ 0.76
USP40-207ENST00000450940 SUZ12Q15022 739 aaKnown RBP19.8■□□□□ 0.76
USP40-207ENST00000450940 RWDD4Q6NW29 188 aaKnown RBP19.8■□□□□ 0.76
USP40-207ENST00000450940 NEK5Q6P3R8 708 aa19.8■□□□□ 0.76
USP40-207ENST00000450940 DPY19L3Q6ZPD9 716 aa19.8■□□□□ 0.76
USP40-207ENST00000450940 ADAT2Q7Z6V5 191 aaKnown RBP19.8■□□□□ 0.76
USP40-207ENST00000450940 PRPF39Q86UA1 669 aaKnown RBP19.8■□□□□ 0.76
USP40-207ENST00000450940 PCDH20Q8N6Y1 951 aaKnown RBP19.8■□□□□ 0.76
USP40-207ENST00000450940 CHST14Q8NCH0 376 aa19.8■□□□□ 0.76
USP40-207ENST00000450940 ISG20Q96AZ6 181 aaKnown RBP19.8■□□□□ 0.76
USP40-207ENST00000450940 SCNM1Q9BWG6 230 aa19.8■□□□□ 0.76
USP40-207ENST00000450940 DMTF1Q9Y222 760 aa19.8■□□□□ 0.76
USP40-207ENST00000450940 PCDHB9Q9Y5E1 797 aa19.8■□□□□ 0.76
USP40-207ENST00000450940 USP24Q9UPU5 2620 aa19.8■□□□□ 0.76
USP40-207ENST00000450940 RNF103O00237 685 aa19.79■□□□□ 0.76
USP40-207ENST00000450940 KCNK3O14649 394 aa19.79■□□□□ 0.76
USP40-207ENST00000450940 GZMAP12544 262 aa19.79■□□□□ 0.76
USP40-207ENST00000450940 ACVRL1P37023 503 aa19.79■□□□□ 0.76
USP40-207ENST00000450940 C21orf59P57076 290 aa19.79■□□□□ 0.76
USP40-207ENST00000450940 CCDC15Q0P6D6 951 aa19.79■□□□□ 0.76
USP40-207ENST00000450940 POM121L1PQ3SYA9 428 aa19.79■□□□□ 0.76
USP40-207ENST00000450940 FIGNQ5HY92 759 aa19.79■□□□□ 0.76
USP40-207ENST00000450940 NAPEPLDQ6IQ20 393 aa19.79■□□□□ 0.76
USP40-207ENST00000450940 PLEKHA7Q6IQ23 1121 aa19.79■□□□□ 0.76
USP40-207ENST00000450940 RAB44Q7Z6P3 723 aaPredicted RBP19.79■□□□□ 0.76
USP40-207ENST00000450940 MFSD2AQ8NA29 543 aa19.79■□□□□ 0.76
USP40-207ENST00000450940 SETD7Q8WTS6 366 aaKnown RBP19.79■□□□□ 0.76
USP40-207ENST00000450940 ARRDC3Q96B67 414 aa19.79■□□□□ 0.76
USP40-207ENST00000450940 SERAC1Q96JX3 654 aa19.79■□□□□ 0.76
USP40-207ENST00000450940 MCEEQ96PE7 176 aa19.79■□□□□ 0.76
USP40-207ENST00000450940 TMEM121BQ9BXQ6 578 aaPredicted RBP19.79■□□□□ 0.76
USP40-207ENST00000450940 HDAC8Q9BY41 377 aa19.79■□□□□ 0.76
USP40-207ENST00000450940 TNKS2Q9H2K2 1166 aa19.79■□□□□ 0.76
USP40-207ENST00000450940 FZD10Q9ULW2 581 aa19.79■□□□□ 0.76
USP40-207ENST00000450940 NEUROG3Q9Y4Z2 214 aa19.79■□□□□ 0.76
USP40-207ENST00000450940 WASF2Q9Y6W5 498 aa19.79■□□□□ 0.76
USP40-207ENST00000450940 CACNA1BQ00975 2339 aa19.78■□□□□ 0.76
USP40-207ENST00000450940 A0A1B0GTQ1 180 aa19.78■□□□□ 0.76
USP40-207ENST00000450940 KPNA3O00505 521 aaPredicted RBP19.78■□□□□ 0.76
USP40-207ENST00000450940 SPINK2P20155 84 aa19.78■□□□□ 0.76
USP40-207ENST00000450940 RECQLP46063 649 aaPredicted RBP19.78■□□□□ 0.76
USP40-207ENST00000450940 CCT8P50990 548 aa19.78■□□□□ 0.76
USP40-207ENST00000450940 GEMIN4P57678 1058 aaKnown RBP19.78■□□□□ 0.76
USP40-207ENST00000450940 OGDHQ02218 1023 aa19.78■□□□□ 0.76
USP40-207ENST00000450940 MAMLD1Q13495 774 aa19.78■□□□□ 0.76
USP40-207ENST00000450940 ASIC2Q16515 512 aa19.78■□□□□ 0.76
USP40-207ENST00000450940 CARD16Q5EG05 197 aa19.78■□□□□ 0.76
USP40-207ENST00000450940 ARSIQ5FYB1 569 aa19.78■□□□□ 0.76
USP40-207ENST00000450940 E4F1Q66K89 784 aaPredicted RBP19.78■□□□□ 0.76
USP40-207ENST00000450940 ZNF571Q7Z3V5 609 aaPredicted RBP19.78■□□□□ 0.76
USP40-207ENST00000450940 IQCHQ86VS3 1027 aa19.78■□□□□ 0.76
USP40-207ENST00000450940 PYROXD2Q8N2H3 581 aa19.78■□□□□ 0.76
USP40-207ENST00000450940 CDC6Q99741 560 aa19.78■□□□□ 0.76
USP40-207ENST00000450940 HAUS4Q9H6D7 363 aa19.78■□□□□ 0.76
USP40-207ENST00000450940 AASDHPPTQ9NRN7 309 aa19.78■□□□□ 0.76
USP40-207ENST00000450940 IL36AQ9UHA7 158 aa19.78■□□□□ 0.76
USP40-207ENST00000450940 DNAI1Q9UI46 699 aa19.78■□□□□ 0.76
USP40-207ENST00000450940 WASH4PA8MWX3 477 aa19.77■□□□□ 0.76
USP40-207ENST00000450940 TLR4O00206 839 aa19.77■□□□□ 0.76
USP40-207ENST00000450940 HYAL3O43820 417 aaPredicted RBP19.77■□□□□ 0.76
USP40-207ENST00000450940 LEFTY1O75610 366 aa19.77■□□□□ 0.76
USP40-207ENST00000450940 FTH1P19P0C7X4 201 aa19.77■□□□□ 0.76
USP40-207ENST00000450940 SLC45A4Q5BKX6 768 aa19.77■□□□□ 0.76
USP40-207ENST00000450940 EFHC2Q5JST6 749 aa19.77■□□□□ 0.76
USP40-207ENST00000450940 SFMBT2Q5VUG0 894 aa19.77■□□□□ 0.76
USP40-207ENST00000450940 DCUN1D2Q6PH85 259 aa19.77■□□□□ 0.76
USP40-207ENST00000450940 ERN2Q76MJ5 926 aaKnown RBP19.77■□□□□ 0.76
USP40-207ENST00000450940 RTL3Q8N8U3 475 aaKnown RBP19.77■□□□□ 0.76
USP40-207ENST00000450940 RHBDD1Q8TEB9 315 aa19.77■□□□□ 0.76
USP40-207ENST00000450940 ADAMTS14Q8WXS8 1223 aa19.77■□□□□ 0.76
USP40-207ENST00000450940 ELF4Q99607 663 aaPredicted RBP19.77■□□□□ 0.76
USP40-207ENST00000450940 HEPHQ9BQS7 1158 aa19.77■□□□□ 0.76
USP40-207ENST00000450940 NOL6Q9H6R4 1146 aaKnown RBP19.77■□□□□ 0.76
USP40-207ENST00000450940 ERVMER34-1Q9H9K5 563 aa19.77■□□□□ 0.76
USP40-207ENST00000450940 CBX8Q9HC52 389 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms