RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 C12orf65Q9H3J6 166 aaKnown RBP5.51□□□□□ -1.53
TM9SF3-202ENST00000443638 PDZD7Q9H5P4 517 aa5.51□□□□□ -1.53
TM9SF3-202ENST00000443638 MBNL1Q9NR56 388 aaKnown RBP5.51□□□□□ -1.53
TM9SF3-202ENST00000443638 SNTG1Q9NSN8 517 aa5.51□□□□□ -1.53
TM9SF3-202ENST00000443638 OGFRQ9NZT2 677 aa5.51□□□□□ -1.53
TM9SF3-202ENST00000443638 KIAA1456Q9P272 454 aa5.51□□□□□ -1.53
TM9SF3-202ENST00000443638 A4GNTQ9UNA3 340 aa5.51□□□□□ -1.53
TM9SF3-202ENST00000443638 SH3BP1Q9Y3L3 701 aa5.51□□□□□ -1.53
TM9SF3-202ENST00000443638 PKP3Q9Y446 797 aa5.51□□□□□ -1.53
TM9SF3-202ENST00000443638 ATP6V0A2Q9Y487 856 aa5.51□□□□□ -1.53
TM9SF3-202ENST00000443638 LOC102723996A0A087X1L8 192 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 A4D1N5 150 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 LRRC53A6NM62 1247 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 MARCH11A6NNE9 402 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 DDX39AO00148 427 aaKnown RBP5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 QSOX1O00391 747 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 ZNF185O15231 689 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 EXOC3O60645 756 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 KINO60870 393 aaKnown RBP5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 ERN1O75460 977 aaKnown RBP5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 B3GALNT1O75752 331 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 FTCDO95954 541 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 ITPKBP27987 946 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 CAMPP49913 170 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 NPY4RP50391 375 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 RABGGTBP53611 331 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 SLC12A2P55011 1212 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 FPGSQ05932 587 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 ACTN3Q08043 901 aaPredicted RBP5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 LASP1Q14847 261 aaKnown RBP5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 PPA1Q15181 289 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 ELAVL1Q15717 326 aaKnown RBP5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 CYP2A13Q16696 494 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 GEN1Q17RS7 908 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 HYAL4Q2M3T9 481 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 ZRANB3Q5FWF4 1079 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 CST9LP1Q5W188 147 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 B3GNTL1Q67FW5 361 aaPredicted RBP5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 SP5Q6BEB4 398 aaPredicted RBP5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 FOXR2Q6PJQ5 311 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 RHPN2Q8IUC4 686 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 MAPKAPK5Q8IW41 473 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 LAS2Q8IYD9 372 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 ABI1Q8IZP0 508 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 MMP21Q8N119 569 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 CARFQ8N187 725 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 VPS52Q8N1B4 723 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 EXOC4Q96A65 974 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 NACC2Q96BF6 587 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 PLA2G12BQ9BX93 195 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 ACTRT3Q9BYD9 372 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 GLOD4Q9HC38 313 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 NRIP3Q9NQ35 241 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 ABHD10Q9NUJ1 306 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 COQ3Q9NZJ6 369 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 UPB1Q9UBR1 384 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 HAO1Q9UJM8 370 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 PPIEQ9UNP9 301 aaKnown RBP5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 LIPT1Q9Y234 373 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 FPGT-TNNI3KV9GXZ4 949 aa5.5□□□□□ -1.53
TM9SF3-202ENST00000443638 TRAV34A0A0B4J273 112 aa5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 KRTAP4-8A0A0G2JLE6 195 aa5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 ARHGAP10A1A4S6 786 aa5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 EIF3CLB5ME19 914 aaKnown RBP5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 PSMD9O00233 223 aa5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 DNM1LO00429 736 aa5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 SLC16A3O15427 465 aaKnown RBP5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 HCRTR2O43614 444 aa5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 STX6O43752 255 aa5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 HBP1O60381 514 aa5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 CDC14BO60729 498 aa5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 PRAMEF2O60811 474 aa5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 MFAP3LO75121 409 aa5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 TPOP07202 933 aa5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 FDPSP14324 419 aaKnown RBP5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 CREB1P16220 341 aa5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 ZNF37AP17032 561 aaPredicted RBP5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 HOXB9P17482 250 aaPredicted RBP5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 HLA-DPA1P20036 260 aa5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 AGAP20933 346 aa5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 SFPQP23246 707 aaKnown RBP eCLIP5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 PON1P27169 355 aa5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 DUSP1P28562 367 aa5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 APOBEC3AP31941 199 aaPredicted RBP5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 HPDP32754 393 aaPredicted RBP5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 KIF5BP33176 963 aa5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 CCR10P46092 362 aa5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 HNRNPMP52272 730 aaKnown RBP eCLIP5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 YBEYP58557 167 aaPredicted RBP5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 IL1RL1Q01638 556 aa5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 TAP1Q03518 808 aa5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 COASYQ13057 564 aa5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 TUBB2AQ13885 445 aa5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 MORF4L2Q15014 288 aa5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 RNPS1Q15287 305 aaKnown RBP5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 RPE65Q16518 533 aa5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 C2orf76Q3KRA6 126 aa5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 PDCD4Q53EL6 469 aaKnown RBP5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 SOWAHCQ53LP3 525 aaPredicted RBP5.49□□□□□ -1.53
TM9SF3-202ENST00000443638 FBLN7Q53RD9 439 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms