RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 GATA6Q92908 595 aa18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 ARHGEF2Q92974 986 aaKnown RBP18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 VCPIP1Q96JH7 1222 aa18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 SELENOOQ9BVL4 669 aa18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 CEP44Q9C0F1 390 aa18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 AIPL1Q9NZN9 384 aa18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 BTBD3Q9Y2F9 522 aa18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 ACTL7AQ9Y615 435 aa18.38■□□□□ 0.53
TRAPPC3-202ENST00000373162 CACNA1GO43497 2377 aa18.37■□□□□ 0.53
TRAPPC3-202ENST00000373162 C1QTNF3-AMACRE9PGA6 284 aa18.37■□□□□ 0.53
TRAPPC3-202ENST00000373162 PLEKP08567 350 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC3-202ENST00000373162 L1CAMP32004 1257 aa18.37■□□□□ 0.53
TRAPPC3-202ENST00000373162 SLC20A2Q08357 652 aa18.37■□□□□ 0.53
TRAPPC3-202ENST00000373162 NR1I3Q14994 352 aa18.37■□□□□ 0.53
TRAPPC3-202ENST00000373162 ARL13BQ3SXY8 428 aa18.37■□□□□ 0.53
TRAPPC3-202ENST00000373162 FIGNQ5HY92 759 aa18.37■□□□□ 0.53
TRAPPC3-202ENST00000373162 PLEKHA7Q6IQ23 1121 aa18.37■□□□□ 0.53
TRAPPC3-202ENST00000373162 DPY19L3Q6ZPD9 716 aa18.37■□□□□ 0.53
TRAPPC3-202ENST00000373162 DRC7Q8IY82 874 aa18.37■□□□□ 0.53
TRAPPC3-202ENST00000373162 MCEEQ96PE7 176 aa18.37■□□□□ 0.53
TRAPPC3-202ENST00000373162 SCNM1Q9BWG6 230 aa18.37■□□□□ 0.53
TRAPPC3-202ENST00000373162 ATP13A1Q9HD20 1204 aa18.37■□□□□ 0.53
TRAPPC3-202ENST00000373162 ZFYVE26Q68DK2 2539 aa18.37■□□□□ 0.53
TRAPPC3-202ENST00000373162 A0A1B0GTQ1 180 aa18.36■□□□□ 0.53
TRAPPC3-202ENST00000373162 WASH4PA8MWX3 477 aa18.36■□□□□ 0.53
TRAPPC3-202ENST00000373162 FLRT2O43155 660 aa18.36■□□□□ 0.53
TRAPPC3-202ENST00000373162 TRIP6Q15654 476 aaKnown RBP18.36■□□□□ 0.53
TRAPPC3-202ENST00000373162 NAPEPLDQ6IQ20 393 aa18.36■□□□□ 0.53
TRAPPC3-202ENST00000373162 RETSATQ6NUM9 610 aa18.36■□□□□ 0.53
TRAPPC3-202ENST00000373162 DNAJC24Q6P3W2 148 aa18.36■□□□□ 0.53
TRAPPC3-202ENST00000373162 ZNF571Q7Z3V5 609 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC3-202ENST00000373162 PLPP6Q8IY26 295 aa18.36■□□□□ 0.53
TRAPPC3-202ENST00000373162 PYROXD2Q8N2H3 581 aa18.36■□□□□ 0.53
TRAPPC3-202ENST00000373162 ARFGAP1Q8N6T3 406 aa18.36■□□□□ 0.53
TRAPPC3-202ENST00000373162 PCDH20Q8N6Y1 951 aaKnown RBP18.36■□□□□ 0.53
TRAPPC3-202ENST00000373162 ISG20Q96AZ6 181 aaKnown RBP18.36■□□□□ 0.53
TRAPPC3-202ENST00000373162 TBC1D31Q96DN5 1066 aa18.36■□□□□ 0.53
TRAPPC3-202ENST00000373162 CNPY3Q9BT09 278 aa18.36■□□□□ 0.53
TRAPPC3-202ENST00000373162 EDEM3Q9BZQ6 932 aa18.36■□□□□ 0.53
TRAPPC3-202ENST00000373162 PREBQ9HCU5 417 aa18.36■□□□□ 0.53
TRAPPC3-202ENST00000373162 FZD10Q9ULW2 581 aa18.36■□□□□ 0.53
TRAPPC3-202ENST00000373162 NEUROG3Q9Y4Z2 214 aa18.36■□□□□ 0.53
TRAPPC3-202ENST00000373162 CBX4O00257 560 aa18.35■□□□□ 0.53
TRAPPC3-202ENST00000373162 DDX3XO00571 662 aaKnown RBP eCLIP18.35■□□□□ 0.532e-8■■■■■ 37.2
TRAPPC3-202ENST00000373162 KCNK3O14649 394 aa18.35■□□□□ 0.53
TRAPPC3-202ENST00000373162 HYAL3O43820 417 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC3-202ENST00000373162 FTH1P19P0C7X4 201 aa18.35■□□□□ 0.53
TRAPPC3-202ENST00000373162 CD38P28907 300 aa18.35■□□□□ 0.53
TRAPPC3-202ENST00000373162 NUDT1P36639 197 aa18.35■□□□□ 0.53
TRAPPC3-202ENST00000373162 CCT8P50990 548 aa18.35■□□□□ 0.53
TRAPPC3-202ENST00000373162 NXPH1P58417 271 aa18.35■□□□□ 0.53
TRAPPC3-202ENST00000373162 MAMLD1Q13495 774 aa18.35■□□□□ 0.53
TRAPPC3-202ENST00000373162 POM121L1PQ3SYA9 428 aa18.35■□□□□ 0.53
TRAPPC3-202ENST00000373162 CYP4V2Q6ZWL3 525 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC3-202ENST00000373162 KANSL1Q7Z3B3 1105 aa18.35■□□□□ 0.53
TRAPPC3-202ENST00000373162 SLFN11Q7Z7L1 901 aa18.35■□□□□ 0.53
TRAPPC3-202ENST00000373162 TMEM145Q8NBT3 493 aa18.35■□□□□ 0.53
TRAPPC3-202ENST00000373162 ADAMTS14Q8WXS8 1223 aa18.35■□□□□ 0.53
TRAPPC3-202ENST00000373162 HDAC8Q9BY41 377 aa18.35■□□□□ 0.53
TRAPPC3-202ENST00000373162 MAGEH1Q9H213 219 aa18.35■□□□□ 0.53
TRAPPC3-202ENST00000373162 TNKS2Q9H2K2 1166 aa18.35■□□□□ 0.53
TRAPPC3-202ENST00000373162 CBX8Q9HC52 389 aa18.35■□□□□ 0.53
TRAPPC3-202ENST00000373162 DMTF1Q9Y222 760 aa18.35■□□□□ 0.53
TRAPPC3-202ENST00000373162 PTPRBP23467 1997 aa18.35■□□□□ 0.53
TRAPPC3-202ENST00000373162 PLXNB3Q9ULL4 1909 aa18.35■□□□□ 0.53
TRAPPC3-202ENST00000373162 TRIM16O95361 564 aa18.34■□□□□ 0.53
TRAPPC3-202ENST00000373162 PRNPP04156 253 aa18.34■□□□□ 0.53
TRAPPC3-202ENST00000373162 CCDC172P0C7W6 258 aa18.34■□□□□ 0.53
TRAPPC3-202ENST00000373162 GZMAP12544 262 aa18.34■□□□□ 0.53
TRAPPC3-202ENST00000373162 ETFBP38117 255 aa18.34■□□□□ 0.53
TRAPPC3-202ENST00000373162 AIF1P55008 147 aa18.34■□□□□ 0.53
TRAPPC3-202ENST00000373162 TMEM259Q4ZIN3 620 aa18.34■□□□□ 0.53
TRAPPC3-202ENST00000373162 HGSNATQ68CP4 663 aa18.34■□□□□ 0.53
TRAPPC3-202ENST00000373162 NEK5Q6P3R8 708 aa18.34■□□□□ 0.53
TRAPPC3-202ENST00000373162 SLCO6A1Q86UG4 719 aa18.34■□□□□ 0.53
TRAPPC3-202ENST00000373162 SPATS2Q86XZ4 545 aaKnown RBP18.34■□□□□ 0.53
TRAPPC3-202ENST00000373162 DNAAF5Q86Y56 855 aa18.34■□□□□ 0.53
TRAPPC3-202ENST00000373162 RTL3Q8N8U3 475 aaKnown RBP18.34■□□□□ 0.53
TRAPPC3-202ENST00000373162 CCDC114Q96M63 670 aa18.34■□□□□ 0.53
TRAPPC3-202ENST00000373162 ELF4Q99607 663 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC3-202ENST00000373162 SPON2Q9BUD6 331 aa18.34■□□□□ 0.53
TRAPPC3-202ENST00000373162 HAUS4Q9H6D7 363 aa18.34■□□□□ 0.53
TRAPPC3-202ENST00000373162 DNAI1Q9UI46 699 aa18.34■□□□□ 0.53
TRAPPC3-202ENST00000373162 KLK13Q9UKR3 277 aa18.34■□□□□ 0.53
TRAPPC3-202ENST00000373162 ZFR2Q9UPR6 939 aaKnown RBP18.34■□□□□ 0.53
TRAPPC3-202ENST00000373162 FCF1Q9Y324 198 aaKnown RBP18.34■□□□□ 0.53
TRAPPC3-202ENST00000373162 TBC1D3DA0A087WVF3 549 aa18.33■□□□□ 0.52
TRAPPC3-202ENST00000373162 TBC1D3IA0A087WXS9 549 aa18.33■□□□□ 0.52
TRAPPC3-202ENST00000373162 TBC1D3EA0A087X179 549 aa18.33■□□□□ 0.52
TRAPPC3-202ENST00000373162 TBC1D3KA0A087X1G2 549 aa18.33■□□□□ 0.52
TRAPPC3-202ENST00000373162 TBC1D3FA6NER0 549 aaPredicted RBP18.33■□□□□ 0.52
TRAPPC3-202ENST00000373162 C1QTNF9BB2RNN3 333 aa18.33■□□□□ 0.52
TRAPPC3-202ENST00000373162 TBC1D3LB9A6J9 549 aa18.33■□□□□ 0.52
TRAPPC3-202ENST00000373162 DFNA5O60443 496 aa18.33■□□□□ 0.52
TRAPPC3-202ENST00000373162 LEFTY1O75610 366 aa18.33■□□□□ 0.52
TRAPPC3-202ENST00000373162 CAPNS1P04632 268 aa18.33■□□□□ 0.52
TRAPPC3-202ENST00000373162 PROS1P07225 676 aa18.33■□□□□ 0.52
TRAPPC3-202ENST00000373162 TBC1D3HP0C7X1 549 aa18.33■□□□□ 0.52
TRAPPC3-202ENST00000373162 C1QTNF9P0C862 333 aa18.33■□□□□ 0.52
TRAPPC3-202ENST00000373162 CCNHP51946 323 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms