RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 NTAN1Q96AB6 310 aa17.43■□□□□ 0.38
BRCC3-202ENST00000340647 CAAP1Q9H8G2 361 aa17.43■□□□□ 0.38
BRCC3-202ENST00000340647 PCDHGB2Q9Y5G2 931 aa17.43■□□□□ 0.38
BRCC3-202ENST00000340647 ATRXP46100 2492 aa17.43■□□□□ 0.38
BRCC3-202ENST00000340647 FAM221BA6H8Z2 402 aa17.42■□□□□ 0.38
BRCC3-202ENST00000340647 LRRC53A6NM62 1247 aa17.42■□□□□ 0.38
BRCC3-202ENST00000340647 BNIP3LO60238 219 aa17.42■□□□□ 0.38
BRCC3-202ENST00000340647 CALB1P05937 261 aa17.42■□□□□ 0.38
BRCC3-202ENST00000340647 PLEKP08567 350 aaPredicted RBP17.42■□□□□ 0.38
BRCC3-202ENST00000340647 HOXB3P14651 431 aaPredicted RBP17.42■□□□□ 0.38
BRCC3-202ENST00000340647 FERP16591 822 aa17.42■□□□□ 0.38
BRCC3-202ENST00000340647 CHRNA3P32297 505 aa17.42■□□□□ 0.38
BRCC3-202ENST00000340647 ZNF165P49910 485 aa17.42■□□□□ 0.38
BRCC3-202ENST00000340647 SERPINH1P50454 418 aaKnown RBP17.42■□□□□ 0.38
BRCC3-202ENST00000340647 NR1I3Q14994 352 aa17.42■□□□□ 0.38
BRCC3-202ENST00000340647 DPY19L3Q6ZPD9 716 aa17.42■□□□□ 0.38
BRCC3-202ENST00000340647 SPATS2Q86XZ4 545 aaKnown RBP17.42■□□□□ 0.38
BRCC3-202ENST00000340647 CHCHD4Q8N4Q1 142 aa17.42■□□□□ 0.38
BRCC3-202ENST00000340647 PNPLA1Q8N8W4 532 aa17.42■□□□□ 0.38
BRCC3-202ENST00000340647 ARHGEF2Q92974 986 aaKnown RBP17.42■□□□□ 0.38
BRCC3-202ENST00000340647 SPON2Q9BUD6 331 aa17.42■□□□□ 0.38
BRCC3-202ENST00000340647 KLC2Q9H0B6 622 aa17.42■□□□□ 0.38
BRCC3-202ENST00000340647 TMEM248Q9NWD8 314 aa17.42■□□□□ 0.38
BRCC3-202ENST00000340647 MYO6Q9UM54 1294 aa17.42■□□□□ 0.38
BRCC3-202ENST00000340647 TBC1D3DA0A087WVF3 549 aa17.41■□□□□ 0.38
BRCC3-202ENST00000340647 TBC1D3IA0A087WXS9 549 aa17.41■□□□□ 0.38
BRCC3-202ENST00000340647 TBC1D3EA0A087X179 549 aa17.41■□□□□ 0.38
BRCC3-202ENST00000340647 TBC1D3KA0A087X1G2 549 aa17.41■□□□□ 0.38
BRCC3-202ENST00000340647 TBC1D3FA6NER0 549 aaPredicted RBP17.41■□□□□ 0.38
BRCC3-202ENST00000340647 TBC1D3LB9A6J9 549 aa17.41■□□□□ 0.38
BRCC3-202ENST00000340647 CBX4O00257 560 aa17.41■□□□□ 0.38
BRCC3-202ENST00000340647 SLC7A4O43246 635 aa17.41■□□□□ 0.38
BRCC3-202ENST00000340647 TBC1D3HP0C7X1 549 aa17.41■□□□□ 0.38
BRCC3-202ENST00000340647 RHOQP17081 205 aa17.41■□□□□ 0.38
BRCC3-202ENST00000340647 CLCN6P51797 869 aa17.41■□□□□ 0.38
BRCC3-202ENST00000340647 ZNF143P52747 638 aaPredicted RBP17.41■□□□□ 0.38
BRCC3-202ENST00000340647 IL9RQ01113 521 aa17.41■□□□□ 0.38
BRCC3-202ENST00000340647 TEAD4Q15561 434 aa17.41■□□□□ 0.38
BRCC3-202ENST00000340647 ARSIQ5FYB1 569 aa17.41■□□□□ 0.38
BRCC3-202ENST00000340647 TBC1D3GQ6DHY5 549 aa17.41■□□□□ 0.38
BRCC3-202ENST00000340647 TBC1D3CQ6IPX1 549 aa17.41■□□□□ 0.38
BRCC3-202ENST00000340647 ZNF571Q7Z3V5 609 aaPredicted RBP17.41■□□□□ 0.38
BRCC3-202ENST00000340647 TRIM69Q86WT6 500 aa17.41■□□□□ 0.38
BRCC3-202ENST00000340647 TBC1D3Q8IZP1 549 aaPredicted RBP17.41■□□□□ 0.38
BRCC3-202ENST00000340647 TMIEQ8NEW7 156 aa17.41■□□□□ 0.38
BRCC3-202ENST00000340647 MCEEQ96PE7 176 aa17.41■□□□□ 0.38
BRCC3-202ENST00000340647 SELENOOQ9BVL4 669 aa17.41■□□□□ 0.38
BRCC3-202ENST00000340647 TRIM7Q9C029 511 aa17.41■□□□□ 0.38
BRCC3-202ENST00000340647 KDM4CQ9H3R0 1056 aa17.41■□□□□ 0.38
BRCC3-202ENST00000340647 ATP13A1Q9HD20 1204 aa17.41■□□□□ 0.38
BRCC3-202ENST00000340647 AIPL1Q9NZN9 384 aa17.41■□□□□ 0.38
BRCC3-202ENST00000340647 DNAI1Q9UI46 699 aa17.41■□□□□ 0.38
BRCC3-202ENST00000340647 CA5BQ9Y2D0 317 aa17.41■□□□□ 0.38
BRCC3-202ENST00000340647 FCF1Q9Y324 198 aaKnown RBP17.41■□□□□ 0.38
BRCC3-202ENST00000340647 ANKRD36A6QL64 1941 aa17.41■□□□□ 0.38
BRCC3-202ENST00000340647 A0A1B0GTQ1 180 aa17.4■□□□□ 0.38
BRCC3-202ENST00000340647 A0A1W2PQC6 194 aa17.4■□□□□ 0.38
BRCC3-202ENST00000340647 ATMINO43313 823 aaPredicted RBP17.4■□□□□ 0.38
BRCC3-202ENST00000340647 PCDHGA12O60330 932 aa17.4■□□□□ 0.38
BRCC3-202ENST00000340647 CAPNS1P04632 268 aa17.4■□□□□ 0.38
BRCC3-202ENST00000340647 FTH1P19P0C7X4 201 aa17.4■□□□□ 0.38
BRCC3-202ENST00000340647 CD38P28907 300 aa17.4■□□□□ 0.38
BRCC3-202ENST00000340647 MAT2AP31153 395 aaKnown RBP17.4■□□□□ 0.38
BRCC3-202ENST00000340647 PBX1P40424 430 aa17.4■□□□□ 0.38
BRCC3-202ENST00000340647 SFSWAPQ12872 951 aaKnown RBP17.4■□□□□ 0.38
BRCC3-202ENST00000340647 MAMLD1Q13495 774 aa17.4■□□□□ 0.38
BRCC3-202ENST00000340647 FAM46CQ5VWP2 391 aa17.4■□□□□ 0.38
BRCC3-202ENST00000340647 CYP4V2Q6ZWL3 525 aaPredicted RBP17.4■□□□□ 0.38
BRCC3-202ENST00000340647 DSG4Q86SJ6 1040 aa17.4■□□□□ 0.38
BRCC3-202ENST00000340647 NAT10Q9H0A0 1025 aaKnown RBP17.4■□□□□ 0.38
BRCC3-202ENST00000340647 HAUS4Q9H6D7 363 aa17.4■□□□□ 0.38
BRCC3-202ENST00000340647 SEPT11Q9NVA2 429 aaKnown RBP17.4■□□□□ 0.38
BRCC3-202ENST00000340647 FZD10Q9ULW2 581 aa17.4■□□□□ 0.38
BRCC3-202ENST00000340647 ZFR2Q9UPR6 939 aaKnown RBP17.4■□□□□ 0.38
BRCC3-202ENST00000340647 CELSR3Q9NYQ7 3312 aa17.39■□□□□ 0.38
BRCC3-202ENST00000340647 C1QTNF3-AMACRE9PGA6 284 aa17.39■□□□□ 0.37
BRCC3-202ENST00000340647 DDX3XO00571 662 aaKnown RBP eCLIP17.39■□□□□ 0.373e-7■■■■□ 19.9
BRCC3-202ENST00000340647 LEFTY1O75610 366 aa17.39■□□□□ 0.37
BRCC3-202ENST00000340647 ATXN1LP0C7T5 689 aaKnown RBP17.39■□□□□ 0.37
BRCC3-202ENST00000340647 L1CAMP32004 1257 aa17.39■□□□□ 0.37
BRCC3-202ENST00000340647 GKP32189 559 aa17.39■□□□□ 0.37
BRCC3-202ENST00000340647 PRKCIP41743 596 aa17.39■□□□□ 0.37
BRCC3-202ENST00000340647 MAPKAPK2P49137 400 aa17.39■□□□□ 0.37
BRCC3-202ENST00000340647 HNRNPDQ14103 355 aaKnown RBP17.39■□□□□ 0.37
BRCC3-202ENST00000340647 ARL13BQ3SXY8 428 aa17.39■□□□□ 0.37
BRCC3-202ENST00000340647 PLEKHA7Q6IQ23 1121 aa17.39■□□□□ 0.37
BRCC3-202ENST00000340647 RWDD4Q6NW29 188 aaKnown RBP17.39■□□□□ 0.37
BRCC3-202ENST00000340647 DNAJC24Q6P3W2 148 aa17.39■□□□□ 0.37
BRCC3-202ENST00000340647 LEKR1Q6ZMV7 388 aa17.39■□□□□ 0.37
BRCC3-202ENST00000340647 KANSL1Q7Z3B3 1105 aa17.39■□□□□ 0.37
BRCC3-202ENST00000340647 SLFN11Q7Z7L1 901 aa17.39■□□□□ 0.37
BRCC3-202ENST00000340647 TMEM145Q8NBT3 493 aa17.39■□□□□ 0.37
BRCC3-202ENST00000340647 NETO2Q8NC67 525 aa17.39■□□□□ 0.37
BRCC3-202ENST00000340647 GRIN3AQ8TCU5 1115 aa17.39■□□□□ 0.37
BRCC3-202ENST00000340647 SETD7Q8WTS6 366 aaKnown RBP17.39■□□□□ 0.37
BRCC3-202ENST00000340647 ADAMTS14Q8WXS8 1223 aa17.39■□□□□ 0.37
BRCC3-202ENST00000340647 TBC1D31Q96DN5 1066 aa17.39■□□□□ 0.37
BRCC3-202ENST00000340647 SERAC1Q96JX3 654 aa17.39■□□□□ 0.37
BRCC3-202ENST00000340647 PEBP4Q96S96 227 aa17.39■□□□□ 0.37
BRCC3-202ENST00000340647 CEP44Q9C0F1 390 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms